RNA–Protein interactions for RNA: ENST00000319518.12

CPNE7-202, Transcript of copine 7, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE7, Length 2,409 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7-202ENST00000319518 TDRD9Q8NDG6 1382 aaKnown RBP30.74■■■□□ 2.51
CPNE7-202ENST00000319518 WDR97A6NE52 1622 aa30.7■■■□□ 2.5
CPNE7-202ENST00000319518 YTHDC1Q96MU7 727 aaKnown RBP30.67■■■□□ 2.5
CPNE7-202ENST00000319518 P3H3Q8IVL6 736 aa30.66■■■□□ 2.5
CPNE7-202ENST00000319518 DHX57Q6P158 1386 aaKnown RBP30.65■■■□□ 2.5
CPNE7-202ENST00000319518 CUL7Q14999 1698 aa30.6■■■□□ 2.49
CPNE7-202ENST00000319518 ABCA5Q8WWZ7 1642 aa30.59■■■□□ 2.49
CPNE7-202ENST00000319518 GAPVD1Q14C86 1478 aa30.57■■■□□ 2.48
CPNE7-202ENST00000319518 RRBP1Q9P2E9 1410 aaKnown RBP30.56■■■□□ 2.48
CPNE7-202ENST00000319518 CLSPNQ9HAW4 1339 aa30.56■■■□□ 2.48
CPNE7-202ENST00000319518 TARBP1Q13395 1621 aaKnown RBP30.51■■■□□ 2.47
CPNE7-202ENST00000319518 FHOD3Q2V2M9 1422 aa30.48■■■□□ 2.47
CPNE7-202ENST00000319518 CTTNBP2Q8WZ74 1663 aa30.45■■■□□ 2.46
CPNE7-202ENST00000319518 MRC2Q9UBG0 1479 aa30.45■■■□□ 2.46
CPNE7-202ENST00000319518 ATP1B4Q9UN42 357 aaPredicted RBP30.43■■■□□ 2.46
CPNE7-202ENST00000319518 TIAM1Q13009 1591 aa30.4■■■□□ 2.46
CPNE7-202ENST00000319518 AQRO60306 1485 aaKnown RBP eCLIP30.4■■■□□ 2.467e-8■■■■□ 24
CPNE7-202ENST00000319518 PCF11O94913 1555 aaKnown RBP30.39■■■□□ 2.46
CPNE7-202ENST00000319518 CCNB3Q8WWL7 1395 aa30.38■■■□□ 2.45
CPNE7-202ENST00000319518 FHAD1B1AJZ9 1412 aa30.36■■■□□ 2.45
CPNE7-202ENST00000319518 EFCAB5A4FU69 1503 aa30.33■■■□□ 2.45
CPNE7-202ENST00000319518 LRRC9Q6ZRR7 1453 aa30.29■■■□□ 2.44
CPNE7-202ENST00000319518 PBRM1Q86U86 1689 aa30.29■■■□□ 2.44
CPNE7-202ENST00000319518 MAP3K1Q13233 1512 aa30.29■■■□□ 2.44
CPNE7-202ENST00000319518 ITGAEP38570 1179 aa30.27■■■□□ 2.44
CPNE7-202ENST00000319518 ZNF608Q9ULD9 1512 aaPredicted RBP30.26■■■□□ 2.43
CPNE7-202ENST00000319518 WDR62O43379 1518 aa30.22■■■□□ 2.43
CPNE7-202ENST00000319518 CFAP43Q8NDM7 1665 aa30.22■■■□□ 2.43
CPNE7-202ENST00000319518 FYCO1Q9BQS8 1478 aa30.2■■■□□ 2.43
CPNE7-202ENST00000319518 PHLDB1Q86UU1 1377 aa30.2■■■□□ 2.42
CPNE7-202ENST00000319518 CASKIN1Q8WXD9 1431 aa30.2■■■□□ 2.42
CPNE7-202ENST00000319518 ERCC6Q03468 1493 aa30.19■■■□□ 2.42
CPNE7-202ENST00000319518 SAMD9Q5K651 1589 aa30.17■■■□□ 2.42
CPNE7-202ENST00000319518 RAB3GAP2Q9H2M9 1393 aa30.16■■■□□ 2.42
CPNE7-202ENST00000319518 ADAMTS12P58397 1594 aa30.16■■■□□ 2.42
CPNE7-202ENST00000319518 IFT140Q96RY7 1462 aa30.15■■■□□ 2.42
CPNE7-202ENST00000319518 GRIN2BQ13224 1484 aa30.15■■■□□ 2.42
CPNE7-202ENST00000319518 FMN1Q68DA7 1419 aa30.14■■■□□ 2.42
CPNE7-202ENST00000319518 MAPKBP1O60336 1514 aa30.14■■■□□ 2.42
CPNE7-202ENST00000319518 SNAPC4Q5SXM2 1469 aa30.13■■■□□ 2.41
CPNE7-202ENST00000319518 FAM50AQ14320 339 aaKnown RBP30.06■■■□□ 2.4
CPNE7-202ENST00000319518 LRRIQ1Q96JM4 1722 aa30.02■■■□□ 2.4
CPNE7-202ENST00000319518 THOC2Q8NI27 1593 aaKnown RBP30.01■■■□□ 2.39
CPNE7-202ENST00000319518 IQGAP2Q13576 1575 aa30.01■■■□□ 2.39
CPNE7-202ENST00000319518 EIF4G3O43432 1585 aaKnown RBP30■■■□□ 2.39
CPNE7-202ENST00000319518 SETD5Q9C0A6 1442 aa29.99■■■□□ 2.39
CPNE7-202ENST00000319518 MTUS2Q5JR59 1369 aa29.94■■■□□ 2.38
CPNE7-202ENST00000319518 ARID3CA6NKF2 412 aa29.87■■■□□ 2.37
CPNE7-202ENST00000319518 SIN3AQ96ST3 1273 aa29.85■■■□□ 2.37
CPNE7-202ENST00000319518 GRIN2AQ12879 1464 aa29.84■■■□□ 2.37
CPNE7-202ENST00000319518 SUPT16HQ9Y5B9 1047 aaKnown RBP29.82■■■□□ 2.36
CPNE7-202ENST00000319518 KCNH8Q96L42 1107 aa29.81■■■□□ 2.36
CPNE7-202ENST00000319518 MAGI3Q5TCQ9 1506 aa29.81■■■□□ 2.36
CPNE7-202ENST00000319518 FGD6Q6ZV73 1430 aa29.81■■■□□ 2.36
CPNE7-202ENST00000319518 FBLN2P98095 1184 aa29.81■■■□□ 2.36
CPNE7-202ENST00000319518 UGGT2Q9NYU1 1516 aa29.8■■■□□ 2.36
CPNE7-202ENST00000319518 NCOA2Q15596 1464 aa29.79■■■□□ 2.36
CPNE7-202ENST00000319518 KIAA0586Q9BVV6 1533 aa29.79■■■□□ 2.36
CPNE7-202ENST00000319518 CHMP7Q8WUX9 453 aaPredicted RBP29.77■■■□□ 2.36
CPNE7-202ENST00000319518 CDK13Q14004 1512 aaKnown RBP29.74■■■□□ 2.35
CPNE7-202ENST00000319518 DISP1Q96F81 1524 aa29.74■■■□□ 2.35
CPNE7-202ENST00000319518 HECW1Q76N89 1606 aa29.74■■■□□ 2.35
CPNE7-202ENST00000319518 MAGI1Q96QZ7 1491 aaPredicted RBP29.73■■■□□ 2.35
CPNE7-202ENST00000319518 EHBP1L1Q8N3D4 1523 aa29.72■■■□□ 2.35
CPNE7-202ENST00000319518 EPRSP07814 1512 aaKnown RBP29.72■■■□□ 2.35
CPNE7-202ENST00000319518 SUPT6HQ7KZ85 1726 aaKnown RBP29.71■■■□□ 2.35
CPNE7-202ENST00000319518 CCDC18Q5T9S5 1454 aa29.7■■■□□ 2.35
CPNE7-202ENST00000319518 KIAA0556O60303 1618 aa29.7■■■□□ 2.35
CPNE7-202ENST00000319518 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.69■■■□□ 2.341e-6■■■■□ 20
CPNE7-202ENST00000319518 CEP170Q5SW79 1584 aa29.69■■■□□ 2.34
CPNE7-202ENST00000319518 SYNJ2O15056 1496 aa29.69■■■□□ 2.34
CPNE7-202ENST00000319518 MYOM3Q5VTT5 1437 aa29.68■■■□□ 2.34
CPNE7-202ENST00000319518 PTPRKQ15262 1439 aa29.66■■■□□ 2.34
CPNE7-202ENST00000319518 DDX10Q13206 875 aaKnown RBP29.63■■■□□ 2.33
CPNE7-202ENST00000319518 TIMELESSQ9UNS1 1208 aa29.61■■■□□ 2.33
CPNE7-202ENST00000319518 ARHGEF11O15085 1522 aa29.61■■■□□ 2.33
CPNE7-202ENST00000319518 PPP1R15AO75807 674 aaPredicted RBP29.6■■■□□ 2.33
CPNE7-202ENST00000319518 PTPN23Q9H3S7 1636 aa29.56■■■□□ 2.32
CPNE7-202ENST00000319518 NUP153P49790 1475 aaKnown RBP29.54■■■□□ 2.32
CPNE7-202ENST00000319518 HIRIP3Q9BW71 556 aaPredicted RBP29.53■■■□□ 2.32
CPNE7-202ENST00000319518 NUP160Q12769 1436 aa29.51■■■□□ 2.32
CPNE7-202ENST00000319518 JPH4Q96JJ6 628 aa29.51■■■□□ 2.31
CPNE7-202ENST00000319518 RAPGEF6Q8TEU7 1601 aa29.5■■■□□ 2.31
CPNE7-202ENST00000319518 MYT1Q01538 1121 aa29.49■■■□□ 2.31
CPNE7-202ENST00000319518 PLB1Q6P1J6 1458 aa29.47■■■□□ 2.31
CPNE7-202ENST00000319518 CHIC2Q9UKJ5 165 aa29.47■■■□□ 2.31
CPNE7-202ENST00000319518 HFM1A2PYH4 1435 aa29.47■■■□□ 2.31
CPNE7-202ENST00000319518 NAIPQ13075 1403 aa29.43■■■□□ 2.3
CPNE7-202ENST00000319518 RRP7BPQ9NSQ0 103 aa29.42■■■□□ 2.3
CPNE7-202ENST00000319518 UACAQ9BZF9 1416 aa29.42■■■□□ 2.3
CPNE7-202ENST00000319518 TCOF1Q13428 1488 aaKnown RBP29.41■■■□□ 2.3
CPNE7-202ENST00000319518 CARMIL2Q6F5E8 1435 aa29.38■■■□□ 2.29
CPNE7-202ENST00000319518 TSHZ2Q9NRE2 1034 aa29.37■■■□□ 2.29
CPNE7-202ENST00000319518 TONSLQ96HA7 1378 aa29.36■■■□□ 2.29
CPNE7-202ENST00000319518 PRG4Q92954 1404 aaPredicted RBP29.36■■■□□ 2.29
CPNE7-202ENST00000319518 MIA2Q96PC5 1412 aa29.34■■■□□ 2.29
CPNE7-202ENST00000319518 ZNF644Q9H582 1327 aaPredicted RBP29.33■■■□□ 2.29
CPNE7-202ENST00000319518 CDK11AQ9UQ88 783 aaPredicted RBP29.31■■■□□ 2.28
CPNE7-202ENST00000319518 KDM5BQ9UGL1 1544 aa29.31■■■□□ 2.28
CPNE7-202ENST00000319518 CCER2I3L3R5 266 aa29.31■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms