RNA–Protein interactions for RNA: ENST00000318222.3

PKD2L1-201, Transcript of polycystin 2 like 1, transient receptor potential cation channel, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKD2L1, Length 3,043 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD2L1-201ENST00000318222 PPP1R15AO75807 674 aaPredicted RBP17.26■□□□□ 0.35
PKD2L1-201ENST00000318222 NEFLP07196 543 aa17.25■□□□□ 0.35
PKD2L1-201ENST00000318222 PHLDB1Q86UU1 1377 aa17.22■□□□□ 0.35
PKD2L1-201ENST00000318222 MSH5O43196 834 aa17.2■□□□□ 0.34
PKD2L1-201ENST00000318222 CUX1P39880 1505 aa17.2■□□□□ 0.34
PKD2L1-201ENST00000318222 KIF27Q86VH2 1401 aa17.2■□□□□ 0.34
PKD2L1-201ENST00000318222 SETD5Q9C0A6 1442 aa17.2■□□□□ 0.34
PKD2L1-201ENST00000318222 ERICH3Q5RHP9 1530 aa17.19■□□□□ 0.34
PKD2L1-201ENST00000318222 CUX2O14529 1486 aa17.19■□□□□ 0.34
PKD2L1-201ENST00000318222 ANP32CO43423 234 aa17.19■□□□□ 0.34
PKD2L1-201ENST00000318222 HNRNPUQ00839 825 aaKnown RBP eCLIP17.12■□□□□ 0.33
PKD2L1-201ENST00000318222 BIVM-ERCC5R4GMW8 1640 aa17.1■□□□□ 0.33
PKD2L1-201ENST00000318222 IGF1RP08069 1367 aa17.09■□□□□ 0.33
PKD2L1-201ENST00000318222 LRRC9Q6ZRR7 1453 aa17.06■□□□□ 0.32
PKD2L1-201ENST00000318222 CCER2I3L3R5 266 aa17.04■□□□□ 0.32
PKD2L1-201ENST00000318222 CNGB1Q14028 1251 aaPredicted RBP17.04■□□□□ 0.32
PKD2L1-201ENST00000318222 TIAM1Q13009 1591 aa17.04■□□□□ 0.32
PKD2L1-201ENST00000318222 CCDC184Q52MB2 194 aa17.03■□□□□ 0.32
PKD2L1-201ENST00000318222 CARMIL1Q5VZK9 1371 aa17.03■□□□□ 0.32
PKD2L1-201ENST00000318222 SENP3-EIF4A1A0A087X0R7 540 aa17.03■□□□□ 0.32
PKD2L1-201ENST00000318222 TONSLQ96HA7 1378 aa17.02■□□□□ 0.31
PKD2L1-201ENST00000318222 FHOD3Q2V2M9 1422 aa17■□□□□ 0.31
PKD2L1-201ENST00000318222 CHIC2Q9UKJ5 165 aa16.96■□□□□ 0.3
PKD2L1-201ENST00000318222 CDK11AQ9UQ88 783 aaPredicted RBP16.95■□□□□ 0.3
PKD2L1-201ENST00000318222 FAM9BQ8IZU0 186 aa16.94■□□□□ 0.3
PKD2L1-201ENST00000318222 B4GALNT3Q6L9W6 998 aa16.94■□□□□ 0.3
PKD2L1-201ENST00000318222 ERICH6Q7L0X2 663 aa16.93■□□□□ 0.3
PKD2L1-201ENST00000318222 RRP7BPQ9NSQ0 103 aa16.92■□□□□ 0.3
PKD2L1-201ENST00000318222 PTPRKQ15262 1439 aa16.92■□□□□ 0.3
PKD2L1-201ENST00000318222 FOXD1Q16676 465 aa16.91■□□□□ 0.3
PKD2L1-201ENST00000318222 WASHC2AQ641Q2 1341 aa16.91■□□□□ 0.3
PKD2L1-201ENST00000318222 CFTRP13569 1480 aa16.91■□□□□ 0.3
PKD2L1-201ENST00000318222 HSPA5P11021 654 aaKnown RBP16.9■□□□□ 0.3
PKD2L1-201ENST00000318222 PCF11O94913 1555 aaKnown RBP16.9■□□□□ 0.3
PKD2L1-201ENST00000318222 TIMELESSQ9UNS1 1208 aa16.89■□□□□ 0.29
PKD2L1-201ENST00000318222 ARID3CA6NKF2 412 aa16.89■□□□□ 0.29
PKD2L1-201ENST00000318222 AQRO60306 1485 aaKnown RBP eCLIP16.89■□□□□ 0.29
PKD2L1-201ENST00000318222 C11orf95C9JLR9 678 aaPredicted RBP16.88■□□□□ 0.29
PKD2L1-201ENST00000318222 NCAPD3P42695 1498 aa16.85■□□□□ 0.29
PKD2L1-201ENST00000318222 FGD5Q6ZNL6 1462 aa16.85■□□□□ 0.29
PKD2L1-201ENST00000318222 CCDC18Q5T9S5 1454 aa16.84■□□□□ 0.29
PKD2L1-201ENST00000318222 FHAD1B1AJZ9 1412 aa16.84■□□□□ 0.29
PKD2L1-201ENST00000318222 MTUS2Q5JR59 1369 aa16.82■□□□□ 0.28
PKD2L1-201ENST00000318222 NBR1Q14596 966 aa16.82■□□□□ 0.28
PKD2L1-201ENST00000318222 FANCIQ9NVI1 1328 aa16.81■□□□□ 0.28
PKD2L1-201ENST00000318222 RAD54L2Q9Y4B4 1467 aa16.81■□□□□ 0.28
PKD2L1-201ENST00000318222 MAP3K1Q13233 1512 aa16.81■□□□□ 0.28
PKD2L1-201ENST00000318222 FGD6Q6ZV73 1430 aa16.8■□□□□ 0.28
PKD2L1-201ENST00000318222 MRS2Q9HD23 443 aa16.8■□□□□ 0.28
PKD2L1-201ENST00000318222 POLR3GLQ9BT43 218 aa16.78■□□□□ 0.28
PKD2L1-201ENST00000318222 PPP4R2Q9NY27 417 aa16.77■□□□□ 0.27
PKD2L1-201ENST00000318222 PAK3O75914 559 aaPredicted RBP16.76■□□□□ 0.27
PKD2L1-201ENST00000318222 UACAQ9BZF9 1416 aa16.76■□□□□ 0.27
PKD2L1-201ENST00000318222 L3MBTL2Q969R5 705 aa16.75■□□□□ 0.27
PKD2L1-201ENST00000318222 NAIPQ13075 1403 aa16.75■□□□□ 0.27
PKD2L1-201ENST00000318222 EIF4G2P78344 907 aaKnown RBP eCLIP16.75■□□□□ 0.27
PKD2L1-201ENST00000318222 HMGXB3Q12766 1538 aa16.74■□□□□ 0.27
PKD2L1-201ENST00000318222 PRKRIP1Q9H875 184 aaPredicted RBP16.73■□□□□ 0.27
PKD2L1-201ENST00000318222 DEKP35659 375 aaKnown RBP16.72■□□□□ 0.27
PKD2L1-201ENST00000318222 CADPSQ9ULU8 1353 aa16.72■□□□□ 0.27
PKD2L1-201ENST00000318222 HFM1A2PYH4 1435 aa16.72■□□□□ 0.27
PKD2L1-201ENST00000318222 KDM5BQ9UGL1 1544 aa16.71■□□□□ 0.27
PKD2L1-201ENST00000318222 CFAP43Q8NDM7 1665 aa16.71■□□□□ 0.27
PKD2L1-201ENST00000318222 CASKIN1Q8WXD9 1431 aa16.71■□□□□ 0.27
PKD2L1-201ENST00000318222 NBPF8Q3BBV2 869 aa16.7■□□□□ 0.26
PKD2L1-201ENST00000318222 PTPN23Q9H3S7 1636 aa16.68■□□□□ 0.26
PKD2L1-201ENST00000318222 FYCO1Q9BQS8 1478 aa16.68■□□□□ 0.26
PKD2L1-201ENST00000318222 ZNF326Q5BKZ1 582 aaKnown RBP16.67■□□□□ 0.26
PKD2L1-201ENST00000318222 MPHOSPH9Q99550 1183 aa16.67■□□□□ 0.26
PKD2L1-201ENST00000318222 NCOA2Q15596 1464 aa16.66■□□□□ 0.26
PKD2L1-201ENST00000318222 AKNAQ7Z591 1439 aa16.66■□□□□ 0.26
PKD2L1-201ENST00000318222 TDRD9Q8NDG6 1382 aaKnown RBP16.65■□□□□ 0.26
PKD2L1-201ENST00000318222 DENND4BO75064 1496 aaPredicted RBP16.64■□□□□ 0.25
PKD2L1-201ENST00000318222 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.64■□□□□ 0.25
PKD2L1-201ENST00000318222 FMN1Q68DA7 1419 aa16.63■□□□□ 0.25
PKD2L1-201ENST00000318222 CNTLNQ9NXG0 1405 aa16.62■□□□□ 0.25
PKD2L1-201ENST00000318222 CCDC7Q96M83 1385 aa16.62■□□□□ 0.25
PKD2L1-201ENST00000318222 MYOM3Q5VTT5 1437 aa16.62■□□□□ 0.25
PKD2L1-201ENST00000318222 NOP58Q9Y2X3 529 aaKnown RBP16.62■□□□□ 0.25
PKD2L1-201ENST00000318222 KIF7Q2M1P5 1343 aa16.61■□□□□ 0.25
PKD2L1-201ENST00000318222 SNAPC4Q5SXM2 1469 aa16.6■□□□□ 0.25
PKD2L1-201ENST00000318222 KDM6BO15054 1643 aa16.6■□□□□ 0.25
PKD2L1-201ENST00000318222 ZBED9Q6R2W3 1325 aa16.6■□□□□ 0.25
PKD2L1-201ENST00000318222 FANCD2Q9BXW9 1451 aa16.59■□□□□ 0.25
PKD2L1-201ENST00000318222 SALL2Q9Y467 1007 aaPredicted RBP16.59■□□□□ 0.25
PKD2L1-201ENST00000318222 NESP48681 1621 aa16.58■□□□□ 0.24
PKD2L1-201ENST00000318222 CCDC136Q96JN2 1154 aa16.57■□□□□ 0.24
PKD2L1-201ENST00000318222 POLA1P09884 1462 aaPredicted RBP16.57■□□□□ 0.24
PKD2L1-201ENST00000318222 ZNF644Q9H582 1327 aaPredicted RBP16.56■□□□□ 0.24
PKD2L1-201ENST00000318222 NPM2Q86SE8 214 aaKnown RBP16.56■□□□□ 0.24
PKD2L1-201ENST00000318222 MAGI3Q5TCQ9 1506 aa16.54■□□□□ 0.24
PKD2L1-201ENST00000318222 ERICH6BQ5W0A0 696 aa16.54■□□□□ 0.24
PKD2L1-201ENST00000318222 NCOA1Q15788 1441 aa16.53■□□□□ 0.24
PKD2L1-201ENST00000318222 SLC4A1APQ9BWU0 796 aaKnown RBP16.53■□□□□ 0.24
PKD2L1-201ENST00000318222 LRRIQ1Q96JM4 1722 aa16.52■□□□□ 0.24
PKD2L1-201ENST00000318222 EFCAB5A4FU69 1503 aa16.51■□□□□ 0.23
PKD2L1-201ENST00000318222 SKAP1Q86WV1 359 aa16.49■□□□□ 0.23
PKD2L1-201ENST00000318222 TOPBP1Q92547 1522 aa16.49■□□□□ 0.23
PKD2L1-201ENST00000318222 ABCA10Q8WWZ4 1543 aa16.48■□□□□ 0.23
PKD2L1-201ENST00000318222 RTN4Q9NQC3 1192 aaKnown RBP16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms