RNA–Protein interactions for RNA: ENST00000317668.8

PROM2-202, Transcript of prominin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PROM2, Length 3,824 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM2-202ENST00000317668 KANK4Q5T7N3 995 aaPredicted RBP14.88□□□□□ -0.03
PROM2-202ENST00000317668 RAD54L2Q9Y4B4 1467 aa14.86□□□□□ -0.03
PROM2-202ENST00000317668 CEP164Q9UPV0 1460 aa14.84□□□□□ -0.03
PROM2-202ENST00000317668 ANP32EQ9BTT0 268 aa14.84□□□□□ -0.03
PROM2-202ENST00000317668 ERICH6Q7L0X2 663 aa14.82□□□□□ -0.04
PROM2-202ENST00000317668 VPS8Q8N3P4 1428 aa14.8□□□□□ -0.04
PROM2-202ENST00000317668 SIN3AQ96ST3 1273 aa14.8□□□□□ -0.04
PROM2-202ENST00000317668 DHX57Q6P158 1386 aaKnown RBP14.8□□□□□ -0.04
PROM2-202ENST00000317668 PLPPR3Q6T4P5 718 aa14.79□□□□□ -0.04
PROM2-202ENST00000317668 RAPGEF2Q9Y4G8 1499 aa14.78□□□□□ -0.04
PROM2-202ENST00000317668 NPM1P06748 294 aaKnown RBP eCLIP14.77□□□□□ -0.04
PROM2-202ENST00000317668 CDK11AQ9UQ88 783 aaPredicted RBP14.77□□□□□ -0.05
PROM2-202ENST00000317668 AQRO60306 1485 aaKnown RBP eCLIP14.76□□□□□ -0.05
PROM2-202ENST00000317668 SYNJ1O43426 1573 aa14.75□□□□□ -0.05
PROM2-202ENST00000317668 FGD5Q6ZNL6 1462 aa14.74□□□□□ -0.05
PROM2-202ENST00000317668 MTUS2Q5JR59 1369 aa14.74□□□□□ -0.05
PROM2-202ENST00000317668 IRX6P78412 446 aaPredicted RBP14.74□□□□□ -0.05
PROM2-202ENST00000317668 BCL11AQ9H165 835 aa14.74□□□□□ -0.05
PROM2-202ENST00000317668 ANP32CO43423 234 aa14.73□□□□□ -0.05
PROM2-202ENST00000317668 CFTRP13569 1480 aa14.73□□□□□ -0.05
PROM2-202ENST00000317668 RRP7BPQ9NSQ0 103 aa14.72□□□□□ -0.05
PROM2-202ENST00000317668 CLSPNQ9HAW4 1339 aa14.69□□□□□ -0.06
PROM2-202ENST00000317668 SENP3Q9H4L4 574 aaPredicted RBP14.69□□□□□ -0.06
PROM2-202ENST00000317668 IGF1RP08069 1367 aa14.67□□□□□ -0.06
PROM2-202ENST00000317668 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.67□□□□□ -0.06
PROM2-202ENST00000317668 PLEKHD1A6NEE1 506 aa14.66□□□□□ -0.06
PROM2-202ENST00000317668 SALL2Q9Y467 1007 aaPredicted RBP14.66□□□□□ -0.06
PROM2-202ENST00000317668 RBM19Q9Y4C8 960 aaKnown RBP14.66□□□□□ -0.06
PROM2-202ENST00000317668 JPH4Q96JJ6 628 aa14.65□□□□□ -0.06
PROM2-202ENST00000317668 HMGXB3Q12766 1538 aa14.63□□□□□ -0.07
PROM2-202ENST00000317668 FAM9BQ8IZU0 186 aa14.63□□□□□ -0.07
PROM2-202ENST00000317668 KIF21BO75037 1637 aa14.63□□□□□ -0.07
PROM2-202ENST00000317668 FHOD3Q2V2M9 1422 aa14.61□□□□□ -0.07
PROM2-202ENST00000317668 HNRNPUQ00839 825 aaKnown RBP eCLIP14.61□□□□□ -0.07
PROM2-202ENST00000317668 SLC4A1APQ9BWU0 796 aaKnown RBP14.6□□□□□ -0.07
PROM2-202ENST00000317668 CUX1P39880 1505 aa14.58□□□□□ -0.07
PROM2-202ENST00000317668 CCNB3Q8WWL7 1395 aa14.58□□□□□ -0.07
PROM2-202ENST00000317668 TONSLQ96HA7 1378 aa14.58□□□□□ -0.07
PROM2-202ENST00000317668 RAB3GAP2Q9H2M9 1393 aa14.58□□□□□ -0.08
PROM2-202ENST00000317668 CYB5RLQ6IPT4 315 aa14.58□□□□□ -0.08
PROM2-202ENST00000317668 GAPVD1Q14C86 1478 aa14.57□□□□□ -0.08
PROM2-202ENST00000317668 PEG3Q9GZU2 1588 aa14.56□□□□□ -0.08
PROM2-202ENST00000317668 CFDP1Q9UEE9 299 aaPredicted RBP14.56□□□□□ -0.08
PROM2-202ENST00000317668 KDM2AQ9Y2K7 1162 aa14.55□□□□□ -0.08
PROM2-202ENST00000317668 TOPBP1Q92547 1522 aa14.54□□□□□ -0.08
PROM2-202ENST00000317668 POLA1P09884 1462 aaPredicted RBP14.54□□□□□ -0.08
PROM2-202ENST00000317668 TSPY4P0CV99 314 aa14.53□□□□□ -0.08
PROM2-202ENST00000317668 TSPY10P0CW01 314 aa14.53□□□□□ -0.08
PROM2-202ENST00000317668 FOXD1Q16676 465 aa14.53□□□□□ -0.08
PROM2-202ENST00000317668 TRHP20396 242 aaPredicted RBP14.52□□□□□ -0.08
PROM2-202ENST00000317668 CHGAP10645 457 aaKnown RBP14.51□□□□□ -0.09
PROM2-202ENST00000317668 ARAP1Q96P48 1450 aa14.5□□□□□ -0.09
PROM2-202ENST00000317668 TOP2BQ02880 1626 aa14.47□□□□□ -0.09
PROM2-202ENST00000317668 OSCARQ8IYS5 282 aa14.47□□□□□ -0.09
PROM2-202ENST00000317668 MSH5O43196 834 aa14.45□□□□□ -0.1
PROM2-202ENST00000317668 MRC2Q9UBG0 1479 aa14.44□□□□□ -0.1
PROM2-202ENST00000317668 PPP1R15AO75807 674 aaPredicted RBP14.44□□□□□ -0.1
PROM2-202ENST00000317668 URB2Q14146 1524 aaKnown RBP14.42□□□□□ -0.1
PROM2-202ENST00000317668 ZNF608Q9ULD9 1512 aaPredicted RBP14.42□□□□□ -0.1
PROM2-202ENST00000317668 PRXQ9BXM0 1461 aa14.41□□□□□ -0.1
PROM2-202ENST00000317668 WDR97A6NE52 1622 aa14.41□□□□□ -0.1
PROM2-202ENST00000317668 MRS2Q9HD23 443 aa14.4□□□□□ -0.1
PROM2-202ENST00000317668 SETD5Q9C0A6 1442 aa14.4□□□□□ -0.1
PROM2-202ENST00000317668 RGL3Q3MIN7 710 aa14.4□□□□□ -0.1
PROM2-202ENST00000317668 RRBP1Q9P2E9 1410 aaKnown RBP14.4□□□□□ -0.1
PROM2-202ENST00000317668 FHAD1B1AJZ9 1412 aa14.39□□□□□ -0.11
PROM2-202ENST00000317668 CARMIL2Q6F5E8 1435 aa14.39□□□□□ -0.11
PROM2-202ENST00000317668 MLECQ14165 292 aa14.38□□□□□ -0.11
PROM2-202ENST00000317668 NBR1Q14596 966 aa14.38□□□□□ -0.11
PROM2-202ENST00000317668 B4GALNT3Q6L9W6 998 aa14.37□□□□□ -0.11
PROM2-202ENST00000317668 ESF1Q9H501 851 aaKnown RBP14.37□□□□□ -0.11
PROM2-202ENST00000317668 HNRNPMP52272 730 aaKnown RBP eCLIP14.36□□□□□ -0.11
PROM2-202ENST00000317668 NPM2Q86SE8 214 aaKnown RBP14.35□□□□□ -0.11
PROM2-202ENST00000317668 PHLDB1Q86UU1 1377 aa14.35□□□□□ -0.11
PROM2-202ENST00000317668 ERICH3Q5RHP9 1530 aa14.35□□□□□ -0.11
PROM2-202ENST00000317668 LAMC3Q9Y6N6 1575 aa14.34□□□□□ -0.11
PROM2-202ENST00000317668 PTPRGP23470 1445 aa14.34□□□□□ -0.11
PROM2-202ENST00000317668 ARID4BQ4LE39 1312 aaPredicted RBP14.33□□□□□ -0.11
PROM2-202ENST00000317668 CCER2I3L3R5 266 aa14.33□□□□□ -0.11
PROM2-202ENST00000317668 GRIN2BQ13224 1484 aa14.33□□□□□ -0.12
PROM2-202ENST00000317668 BIVM-ERCC5R4GMW8 1640 aa14.33□□□□□ -0.12
PROM2-202ENST00000317668 SNAPC4Q5SXM2 1469 aa14.33□□□□□ -0.12
PROM2-202ENST00000317668 ARHGAP35Q9NRY4 1499 aa14.33□□□□□ -0.12
PROM2-202ENST00000317668 ZNF644Q9H582 1327 aaPredicted RBP14.32□□□□□ -0.12
PROM2-202ENST00000317668 MAPKBP1O60336 1514 aa14.32□□□□□ -0.12
PROM2-202ENST00000317668 DNMBPQ6XZF7 1577 aa14.31□□□□□ -0.12
PROM2-202ENST00000317668 STAG3Q9UJ98 1225 aa14.31□□□□□ -0.12
PROM2-202ENST00000317668 FMN1Q68DA7 1419 aa14.31□□□□□ -0.12
PROM2-202ENST00000317668 EIF4G2P78344 907 aaKnown RBP eCLIP14.3□□□□□ -0.12
PROM2-202ENST00000317668 CCDC184Q52MB2 194 aa14.29□□□□□ -0.12
PROM2-202ENST00000317668 GGT6Q6P531 493 aa14.28□□□□□ -0.12
PROM2-202ENST00000317668 IFT140Q96RY7 1462 aa14.27□□□□□ -0.12
PROM2-202ENST00000317668 TMC1Q8TDI8 760 aa14.26□□□□□ -0.13
PROM2-202ENST00000317668 PRG4Q92954 1404 aaPredicted RBP14.24□□□□□ -0.13
PROM2-202ENST00000317668 HSPA5P11021 654 aaKnown RBP14.24□□□□□ -0.13
PROM2-202ENST00000317668 DEKP35659 375 aaKnown RBP14.23□□□□□ -0.13
PROM2-202ENST00000317668 ABCA10Q8WWZ4 1543 aa14.22□□□□□ -0.13
PROM2-202ENST00000317668 DAXXQ9UER7 740 aaPredicted RBP14.2□□□□□ -0.14
PROM2-202ENST00000317668 PPP4R2Q9NY27 417 aa14.2□□□□□ -0.14
PROM2-202ENST00000317668 EFCAB2Q5VUJ9 269 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms