RNA–Protein interactions for RNA: ENST00000313566.10

AP4S1-202, Transcript of adaptor related protein complex 4 subunit sigma 1, humanhuman

TSL 3 BASIC

Gene AP4S1, Length 839 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1-202ENST00000313566 SHROOM2Q13796 1616 aa28.8■■■□□ 2.2
AP4S1-202ENST00000313566 CSRNP3Q8WYN3 585 aa28.79■■■□□ 2.2
AP4S1-202ENST00000313566 JPH4Q96JJ6 628 aa28.77■■■□□ 2.2
AP4S1-202ENST00000313566 PRXQ9BXM0 1461 aa28.76■■■□□ 2.19
AP4S1-202ENST00000313566 ARAP1Q96P48 1450 aa28.71■■■□□ 2.19
AP4S1-202ENST00000313566 CYB5RLQ6IPT4 315 aa28.7■■■□□ 2.18
AP4S1-202ENST00000313566 PRG4Q92954 1404 aaPredicted RBP28.67■■■□□ 2.18
AP4S1-202ENST00000313566 IQGAP2Q13576 1575 aa28.62■■■□□ 2.17
AP4S1-202ENST00000313566 ERCC6L2Q5T890 1561 aa28.59■■■□□ 2.17
AP4S1-202ENST00000313566 FAM9AQ8IZU1 332 aaPredicted RBP28.58■■■□□ 2.17
AP4S1-202ENST00000313566 CTTNBP2Q8WZ74 1663 aa28.53■■■□□ 2.16
AP4S1-202ENST00000313566 CARMIL2Q6F5E8 1435 aa28.52■■■□□ 2.16
AP4S1-202ENST00000313566 UGGT2Q9NYU1 1516 aa28.49■■■□□ 2.15
AP4S1-202ENST00000313566 KIF21BO75037 1637 aa28.49■■■□□ 2.15
AP4S1-202ENST00000313566 TNIKQ9UKE5 1360 aa28.39■■■□□ 2.14
AP4S1-202ENST00000313566 DISP1Q96F81 1524 aa28.39■■■□□ 2.14
AP4S1-202ENST00000313566 GOLGA3Q08378 1498 aa28.38■■■□□ 2.13
AP4S1-202ENST00000313566 PTPRGP23470 1445 aa28.36■■■□□ 2.13
AP4S1-202ENST00000313566 KIAA0556O60303 1618 aa28.32■■■□□ 2.12
AP4S1-202ENST00000313566 UBTFP17480 764 aaKnown RBP28.26■■■□□ 2.11
AP4S1-202ENST00000313566 NPM1P06748 294 aaKnown RBP eCLIP28.2■■■□□ 2.1
AP4S1-202ENST00000313566 ADCY10Q96PN6 1610 aa28.18■■■□□ 2.1
AP4S1-202ENST00000313566 UACAQ9BZF9 1416 aa28.18■■■□□ 2.1
AP4S1-202ENST00000313566 TTBK1Q5TCY1 1321 aaPredicted RBP28.18■■■□□ 2.1
AP4S1-202ENST00000313566 SAMD9Q5K651 1589 aa28.17■■■□□ 2.1
AP4S1-202ENST00000313566 UHRF1BP1LA0JNW5 1464 aa28.17■■■□□ 2.1
AP4S1-202ENST00000313566 EHMT2Q96KQ7 1210 aa28.13■■■□□ 2.09
AP4S1-202ENST00000313566 EFCAB5A4FU69 1503 aa28.11■■■□□ 2.09
AP4S1-202ENST00000313566 ABCC2Q92887 1545 aa28.1■■■□□ 2.09
AP4S1-202ENST00000313566 TRHP20396 242 aaPredicted RBP28.08■■■□□ 2.09
AP4S1-202ENST00000313566 P3H3Q8IVL6 736 aa28.08■■■□□ 2.09
AP4S1-202ENST00000313566 MAPKBP1O60336 1514 aa28.05■■■□□ 2.08
AP4S1-202ENST00000313566 RANGAP1P46060 587 aaPredicted RBP28.05■■■□□ 2.08
AP4S1-202ENST00000313566 ABCA8O94911 1581 aa28.03■■■□□ 2.08
AP4S1-202ENST00000313566 PLB1Q6P1J6 1458 aa28.02■■■□□ 2.08
AP4S1-202ENST00000313566 KDM5BQ9UGL1 1544 aa28.01■■■□□ 2.07
AP4S1-202ENST00000313566 FHOD3Q2V2M9 1422 aa27.96■■■□□ 2.07
AP4S1-202ENST00000313566 ARHGAP35Q9NRY4 1499 aa27.93■■■□□ 2.06
AP4S1-202ENST00000313566 ABCC10Q5T3U5 1492 aa27.9■■■□□ 2.06
AP4S1-202ENST00000313566 ZCCHC11Q5TAX3 1644 aaKnown RBP27.89■■■□□ 2.06
AP4S1-202ENST00000313566 RAPGEF6Q8TEU7 1601 aa27.89■■■□□ 2.05
AP4S1-202ENST00000313566 ASXL2Q76L83 1435 aa27.88■■■□□ 2.05
AP4S1-202ENST00000313566 FMN1Q68DA7 1419 aa27.87■■■□□ 2.05
AP4S1-202ENST00000313566 KIF13AQ9H1H9 1805 aa27.84■■■□□ 2.05
AP4S1-202ENST00000313566 FAM69CQ0P6D2 419 aa27.83■■■□□ 2.05
AP4S1-202ENST00000313566 CLIP1P30622 1438 aa27.82■■■□□ 2.04
AP4S1-202ENST00000313566 DIP2BQ9P265 1576 aa27.82■■■□□ 2.04
AP4S1-202ENST00000313566 ATP10BO94823 1461 aa27.81■■■□□ 2.04
AP4S1-202ENST00000313566 NUP153P49790 1475 aaKnown RBP27.78■■■□□ 2.04
AP4S1-202ENST00000313566 WDR7Q9Y4E6 1490 aa27.76■■■□□ 2.04
AP4S1-202ENST00000313566 LOC105371045A0A1W2PR82 267 aa27.75■■■□□ 2.03
AP4S1-202ENST00000313566 GLI2P10070 1586 aa27.74■■■□□ 2.03
AP4S1-202ENST00000313566 EPRSP07814 1512 aaKnown RBP27.72■■■□□ 2.03
AP4S1-202ENST00000313566 CEP162Q5TB80 1403 aa27.69■■■□□ 2.02
AP4S1-202ENST00000313566 ARID3CA6NKF2 412 aa27.69■■■□□ 2.02
AP4S1-202ENST00000313566 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.69■■■□□ 2.02
AP4S1-202ENST00000313566 HNRNPUL2Q1KMD3 747 aaKnown RBP27.69■■■□□ 2.02
AP4S1-202ENST00000313566 HECW1Q76N89 1606 aa27.67■■■□□ 2.02
AP4S1-202ENST00000313566 PLEKHD1A6NEE1 506 aa27.64■■■□□ 2.02
AP4S1-202ENST00000313566 CASKIN1Q8WXD9 1431 aa27.64■■■□□ 2.02
AP4S1-202ENST00000313566 KCNH8Q96L42 1107 aa27.62■■■□□ 2.01
AP4S1-202ENST00000313566 ATP1B4Q9UN42 357 aaPredicted RBP27.62■■■□□ 2.01
AP4S1-202ENST00000313566 CDK11AQ9UQ88 783 aaPredicted RBP27.59■■■□□ 2.01
AP4S1-202ENST00000313566 MAP3K4Q9Y6R4 1608 aa27.58■■■□□ 2.01
AP4S1-202ENST00000313566 FYCO1Q9BQS8 1478 aa27.57■■■□□ 2
AP4S1-202ENST00000313566 TSPOAP1O95153 1857 aa27.56■■■□□ 2
AP4S1-202ENST00000313566 PCF11O94913 1555 aaKnown RBP27.54■■■□□ 2
AP4S1-202ENST00000313566 CDK13Q14004 1512 aaKnown RBP27.54■■■□□ 2
AP4S1-202ENST00000313566 CFAP43Q8NDM7 1665 aa27.54■■■□□ 2
AP4S1-202ENST00000313566 CCDC18Q5T9S5 1454 aa27.53■■■□□ 2
AP4S1-202ENST00000313566 CD109Q6YHK3 1445 aa27.51■■□□□ 1.99
AP4S1-202ENST00000313566 TEX14Q8IWB6 1497 aa27.51■■□□□ 1.99
AP4S1-202ENST00000313566 ABCA9Q8IUA7 1624 aa27.49■■□□□ 1.99
AP4S1-202ENST00000313566 PPRC1Q5VV67 1664 aaKnown RBP27.48■■□□□ 1.99
AP4S1-202ENST00000313566 MAGI3Q5TCQ9 1506 aa27.47■■□□□ 1.99
AP4S1-202ENST00000313566 LRRIQ1Q96JM4 1722 aa27.46■■□□□ 1.99
AP4S1-202ENST00000313566 TROQ12816 1431 aaPredicted RBP27.41■■□□□ 1.98
AP4S1-202ENST00000313566 VPS8Q8N3P4 1428 aa27.38■■□□□ 1.97
AP4S1-202ENST00000313566 PHLDB1Q86UU1 1377 aa27.37■■□□□ 1.97
AP4S1-202ENST00000313566 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.36■■□□□ 1.97
AP4S1-202ENST00000313566 KDM6BO15054 1643 aa27.35■■□□□ 1.97
AP4S1-202ENST00000313566 KIF14Q15058 1648 aa27.32■■□□□ 1.96
AP4S1-202ENST00000313566 NEO1Q92859 1461 aa27.3■■□□□ 1.96
AP4S1-202ENST00000313566 TTC37Q6PGP7 1564 aa27.28■■□□□ 1.96
AP4S1-202ENST00000313566 PLCH2O75038 1416 aa27.26■■□□□ 1.95
AP4S1-202ENST00000313566 ARAP3Q8WWN8 1544 aa27.25■■□□□ 1.95
AP4S1-202ENST00000313566 MTUS2Q5JR59 1369 aa27.23■■□□□ 1.95
AP4S1-202ENST00000313566 COL17A1Q9UMD9 1497 aaPredicted RBP27.23■■□□□ 1.95
AP4S1-202ENST00000313566 CFAP74Q9C0B2 1584 aa27.22■■□□□ 1.95
AP4S1-202ENST00000313566 MYO5CQ9NQX4 1742 aa27.21■■□□□ 1.95
AP4S1-202ENST00000313566 FANCAO15360 1455 aa27.21■■□□□ 1.95
AP4S1-202ENST00000313566 MAP3K1Q13233 1512 aa27.21■■□□□ 1.95
AP4S1-202ENST00000313566 EFCAB2Q5VUJ9 269 aa27.19■■□□□ 1.94
AP4S1-202ENST00000313566 TIAM1Q13009 1591 aa27.17■■□□□ 1.94
AP4S1-202ENST00000313566 AKNAQ7Z591 1439 aa27.16■■□□□ 1.94
AP4S1-202ENST00000313566 EHBP1L1Q8N3D4 1523 aa27.16■■□□□ 1.94
AP4S1-202ENST00000313566 APLP2Q06481 763 aa27.13■■□□□ 1.93
AP4S1-202ENST00000313566 ARHGAP5Q13017 1502 aa27.1■■□□□ 1.93
AP4S1-202ENST00000313566 PREX2Q70Z35 1606 aa27.09■■□□□ 1.93
AP4S1-202ENST00000313566 CDC42BPBQ9Y5S2 1711 aa27.08■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms