RNA–Protein interactions for RNA: ENST00000312990.10

CDK4-202, Transcript of cyclin dependent kinase 4, humanhuman

TSL 1 (best) BASIC

Gene CDK4, Length 1,650 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-202ENST00000312990 UBTFP17480 764 aaKnown RBP30.45■■■□□ 2.46
CDK4-202ENST00000312990 TNIKQ9UKE5 1360 aa30.4■■■□□ 2.46
CDK4-202ENST00000312990 IQGAP2Q13576 1575 aa30.35■■■□□ 2.45
CDK4-202ENST00000312990 KIAA0586Q9BVV6 1533 aa30.34■■■□□ 2.45
CDK4-202ENST00000312990 CLASP1Q7Z460 1538 aa30.31■■■□□ 2.44
CDK4-202ENST00000312990 CEP162Q5TB80 1403 aa30.21■■■□□ 2.43
CDK4-202ENST00000312990 OSCARQ8IYS5 282 aa30.2■■■□□ 2.43
CDK4-202ENST00000312990 SHROOM2Q13796 1616 aa30.2■■■□□ 2.43
CDK4-202ENST00000312990 UGGT2Q9NYU1 1516 aa30.18■■■□□ 2.42
CDK4-202ENST00000312990 SAMD9Q5K651 1589 aa30.14■■■□□ 2.42
CDK4-202ENST00000312990 RANGAP1P46060 587 aaPredicted RBP30.14■■■□□ 2.42
CDK4-202ENST00000312990 CLIP1P30622 1438 aa30.12■■■□□ 2.41
CDK4-202ENST00000312990 JPH4Q96JJ6 628 aa30.1■■■□□ 2.41
CDK4-202ENST00000312990 EFCAB5A4FU69 1503 aa30.1■■■□□ 2.41
CDK4-202ENST00000312990 ARHGAP35Q9NRY4 1499 aa30.09■■■□□ 2.41
CDK4-202ENST00000312990 DISP1Q96F81 1524 aa30.07■■■□□ 2.4
CDK4-202ENST00000312990 KIAA0556O60303 1618 aa30.06■■■□□ 2.4
CDK4-202ENST00000312990 PRG4Q92954 1404 aaPredicted RBP30.01■■■□□ 2.39
CDK4-202ENST00000312990 ERCC6L2Q5T890 1561 aa30■■■□□ 2.39
CDK4-202ENST00000312990 ARAP1Q96P48 1450 aa29.98■■■□□ 2.39
CDK4-202ENST00000312990 FHOD3Q2V2M9 1422 aa29.95■■■□□ 2.38
CDK4-202ENST00000312990 CARMIL2Q6F5E8 1435 aa29.94■■■□□ 2.38
CDK4-202ENST00000312990 P3H3Q8IVL6 736 aa29.93■■■□□ 2.38
CDK4-202ENST00000312990 ARHGEF11O15085 1522 aa29.82■■■□□ 2.36
CDK4-202ENST00000312990 RIMBP3CA6NJZ7 1639 aa29.78■■■□□ 2.36
CDK4-202ENST00000312990 RIMBP3BA6NNM3 1639 aa29.78■■■□□ 2.36
CDK4-202ENST00000312990 RIMBP3Q9UFD9 1639 aa29.78■■■□□ 2.36
CDK4-202ENST00000312990 VPS8Q8N3P4 1428 aa29.78■■■□□ 2.36
CDK4-202ENST00000312990 FMN1Q68DA7 1419 aa29.76■■■□□ 2.36
CDK4-202ENST00000312990 PCF11O94913 1555 aaKnown RBP29.73■■■□□ 2.35
CDK4-202ENST00000312990 TTBK1Q5TCY1 1321 aaPredicted RBP29.72■■■□□ 2.35
CDK4-202ENST00000312990 PTPRGP23470 1445 aa29.72■■■□□ 2.35
CDK4-202ENST00000312990 RAPGEF6Q8TEU7 1601 aa29.68■■■□□ 2.34
CDK4-202ENST00000312990 ABCA8O94911 1581 aa29.66■■■□□ 2.34
CDK4-202ENST00000312990 PLB1Q6P1J6 1458 aa29.66■■■□□ 2.34
CDK4-202ENST00000312990 LRRIQ1Q96JM4 1722 aa29.66■■■□□ 2.34
CDK4-202ENST00000312990 CASKIN1Q8WXD9 1431 aa29.64■■■□□ 2.34
CDK4-202ENST00000312990 FYCO1Q9BQS8 1478 aa29.64■■■□□ 2.33
CDK4-202ENST00000312990 HECW1Q76N89 1606 aa29.61■■■□□ 2.33
CDK4-202ENST00000312990 UACAQ9BZF9 1416 aa29.57■■■□□ 2.32
CDK4-202ENST00000312990 NUP153P49790 1475 aaKnown RBP29.55■■■□□ 2.32
CDK4-202ENST00000312990 ABCC2Q92887 1545 aa29.55■■■□□ 2.32
CDK4-202ENST00000312990 ADCY10Q96PN6 1610 aa29.55■■■□□ 2.32
CDK4-202ENST00000312990 UHRF1BP1LA0JNW5 1464 aa29.5■■■□□ 2.31
CDK4-202ENST00000312990 CFAP43Q8NDM7 1665 aa29.5■■■□□ 2.31
CDK4-202ENST00000312990 ATP1B4Q9UN42 357 aaPredicted RBP29.47■■■□□ 2.31
CDK4-202ENST00000312990 EPRSP07814 1512 aaKnown RBP29.47■■■□□ 2.31
CDK4-202ENST00000312990 DNAJC5Q9H3Z4 198 aa29.47■■■□□ 2.31
CDK4-202ENST00000312990 CDK13Q14004 1512 aaKnown RBP29.45■■■□□ 2.31
CDK4-202ENST00000312990 TIAM1Q13009 1591 aa29.44■■■□□ 2.3
CDK4-202ENST00000312990 CCDC18Q5T9S5 1454 aa29.43■■■□□ 2.3
CDK4-202ENST00000312990 CYB5RLQ6IPT4 315 aa29.42■■■□□ 2.3
CDK4-202ENST00000312990 MAP3K1Q13233 1512 aa29.41■■■□□ 2.3
CDK4-202ENST00000312990 ZCCHC11Q5TAX3 1644 aaKnown RBP29.41■■■□□ 2.3
CDK4-202ENST00000312990 ARID3CA6NKF2 412 aa29.4■■■□□ 2.3
CDK4-202ENST00000312990 ATP10BO94823 1461 aa29.39■■■□□ 2.3
CDK4-202ENST00000312990 KDM5BQ9UGL1 1544 aa29.38■■■□□ 2.29
CDK4-202ENST00000312990 APLP2Q06481 763 aa29.31■■■□□ 2.28
CDK4-202ENST00000312990 MAGI3Q5TCQ9 1506 aa29.31■■■□□ 2.28
CDK4-202ENST00000312990 LRRC9Q6ZRR7 1453 aa29.27■■■□□ 2.28
CDK4-202ENST00000312990 KANK4Q5T7N3 995 aaPredicted RBP29.25■■■□□ 2.27
CDK4-202ENST00000312990 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.25■■■□□ 2.27
CDK4-202ENST00000312990 HNRNPUL2Q1KMD3 747 aaKnown RBP29.25■■■□□ 2.27
CDK4-202ENST00000312990 EHBP1L1Q8N3D4 1523 aa29.22■■■□□ 2.27
CDK4-202ENST00000312990 PPARGC1BQ86YN6 1023 aaKnown RBP29.2■■■□□ 2.26
CDK4-202ENST00000312990 MTUS2Q5JR59 1369 aa29.18■■■□□ 2.26
CDK4-202ENST00000312990 CDK11AQ9UQ88 783 aaPredicted RBP29.16■■■□□ 2.26
CDK4-202ENST00000312990 TROQ12816 1431 aaPredicted RBP29.16■■■□□ 2.26
CDK4-202ENST00000312990 SUPT6HQ7KZ85 1726 aaKnown RBP29.15■■■□□ 2.26
CDK4-202ENST00000312990 NPM1P06748 294 aaKnown RBP eCLIP29.15■■■□□ 2.26
CDK4-202ENST00000312990 MAPKBP1O60336 1514 aa29.14■■■□□ 2.26
CDK4-202ENST00000312990 KIF14Q15058 1648 aa29.14■■■□□ 2.26
CDK4-202ENST00000312990 ASXL2Q76L83 1435 aa29.13■■■□□ 2.25
CDK4-202ENST00000312990 PLEKHD1A6NEE1 506 aa29.12■■■□□ 2.25
CDK4-202ENST00000312990 WDR7Q9Y4E6 1490 aa29.12■■■□□ 2.25
CDK4-202ENST00000312990 NCOA2Q15596 1464 aa29.04■■■□□ 2.24
CDK4-202ENST00000312990 TTC37Q6PGP7 1564 aa29■■■□□ 2.23
CDK4-202ENST00000312990 ABCC10Q5T3U5 1492 aa28.99■■■□□ 2.23
CDK4-202ENST00000312990 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.99■■■□□ 2.232e-6■■■■□ 26.7
CDK4-202ENST00000312990 CDC42BPAQ5VT25 1732 aa28.98■■■□□ 2.23
CDK4-202ENST00000312990 KCNH8Q96L42 1107 aa28.96■■■□□ 2.23
CDK4-202ENST00000312990 ABCA9Q8IUA7 1624 aa28.95■■■□□ 2.23
CDK4-202ENST00000312990 PHLDB1Q86UU1 1377 aa28.95■■■□□ 2.23
CDK4-202ENST00000312990 DIP2BQ9P265 1576 aa28.93■■■□□ 2.22
CDK4-202ENST00000312990 MYO5CQ9NQX4 1742 aa28.93■■■□□ 2.22
CDK4-202ENST00000312990 KIF13AQ9H1H9 1805 aa28.92■■■□□ 2.22
CDK4-202ENST00000312990 ITSN2Q9NZM3 1697 aa28.92■■■□□ 2.22
CDK4-202ENST00000312990 CDC42BPBQ9Y5S2 1711 aa28.9■■■□□ 2.22
CDK4-202ENST00000312990 PREX2Q70Z35 1606 aa28.88■■■□□ 2.21
CDK4-202ENST00000312990 MYOM3Q5VTT5 1437 aa28.87■■■□□ 2.21
CDK4-202ENST00000312990 GLI2P10070 1586 aa28.87■■■□□ 2.21
CDK4-202ENST00000312990 GPATCH8Q9UKJ3 1502 aaKnown RBP28.86■■■□□ 2.21
CDK4-202ENST00000312990 CCNB3Q8WWL7 1395 aa28.85■■■□□ 2.21
CDK4-202ENST00000312990 MAP3K4Q9Y6R4 1608 aa28.84■■■□□ 2.21
CDK4-202ENST00000312990 FGD6Q6ZV73 1430 aa28.8■■■□□ 2.2
CDK4-202ENST00000312990 RRBP1Q9P2E9 1410 aaKnown RBP28.78■■■□□ 2.2
CDK4-202ENST00000312990 PTPN23Q9H3S7 1636 aa28.76■■■□□ 2.2
CDK4-202ENST00000312990 ARAP3Q8WWN8 1544 aa28.76■■■□□ 2.19
CDK4-202ENST00000312990 PLCH2O75038 1416 aa28.75■■■□□ 2.19
CDK4-202ENST00000312990 TSPOAP1O95153 1857 aa28.75■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms