RNA–Protein interactions for RNA: ENST00000311191.10

LRCH1-201, Transcript of leucine rich repeats and calponin homology domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LRCH1, Length 4,710 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1-201ENST00000311191 RAPGEF2Q9Y4G8 1499 aa25.48■■□□□ 1.67
LRCH1-201ENST00000311191 FGD5Q6ZNL6 1462 aa25.47■■□□□ 1.67
LRCH1-201ENST00000311191 GRIN2BQ13224 1484 aa25.47■■□□□ 1.67
LRCH1-201ENST00000311191 POLR3GLQ9BT43 218 aa25.47■■□□□ 1.67
LRCH1-201ENST00000311191 TNIKQ9UKE5 1360 aa25.46■■□□□ 1.67
LRCH1-201ENST00000311191 NESP48681 1621 aa25.45■■□□□ 1.66
LRCH1-201ENST00000311191 FMN1Q68DA7 1419 aa25.4■■□□□ 1.66
LRCH1-201ENST00000311191 PTPRGP23470 1445 aa25.4■■□□□ 1.66
LRCH1-201ENST00000311191 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.38■■□□□ 1.653e-6■□□□□ 10.9
LRCH1-201ENST00000311191 CCNB3Q8WWL7 1395 aa25.38■■□□□ 1.65
LRCH1-201ENST00000311191 EFCAB2Q5VUJ9 269 aa25.38■■□□□ 1.65
LRCH1-201ENST00000311191 UNC13AQ9UPW8 1703 aa25.34■■□□□ 1.65
LRCH1-201ENST00000311191 PPP1R15AO75807 674 aaPredicted RBP25.31■■□□□ 1.64
LRCH1-201ENST00000311191 ZNF326Q5BKZ1 582 aaKnown RBP25.27■■□□□ 1.64
LRCH1-201ENST00000311191 AQRO60306 1485 aaKnown RBP eCLIP25.27■■□□□ 1.643e-6■■■■□ 24.7
LRCH1-201ENST00000311191 CEP162Q5TB80 1403 aa25.27■■□□□ 1.64
LRCH1-201ENST00000311191 HDGFP51858 240 aaKnown RBP25.26■■□□□ 1.63
LRCH1-201ENST00000311191 TOPBP1Q92547 1522 aa25.26■■□□□ 1.63
LRCH1-201ENST00000311191 RAD54L2Q9Y4B4 1467 aa25.24■■□□□ 1.63
LRCH1-201ENST00000311191 PEG3Q9GZU2 1588 aa25.24■■□□□ 1.63
LRCH1-201ENST00000311191 PELP1Q8IZL8 1130 aaKnown RBP25.23■■□□□ 1.63
LRCH1-201ENST00000311191 CHIC2Q9UKJ5 165 aa25.23■■□□□ 1.63
LRCH1-201ENST00000311191 DNMBPQ6XZF7 1577 aa25.23■■□□□ 1.63
LRCH1-201ENST00000311191 KANK1Q14678 1352 aa25.22■■□□□ 1.63
LRCH1-201ENST00000311191 NEUROD1Q13562 356 aa25.18■■□□□ 1.62
LRCH1-201ENST00000311191 RSPH4AQ5TD94 716 aa25.15■■□□□ 1.62
LRCH1-201ENST00000311191 C14orf37Q86TY3 774 aa25.1■■□□□ 1.61
LRCH1-201ENST00000311191 FAM69CQ0P6D2 419 aa25.09■■□□□ 1.61
LRCH1-201ENST00000311191 POLA1P09884 1462 aaPredicted RBP25.06■■□□□ 1.6
LRCH1-201ENST00000311191 IGF1RP08069 1367 aa25.06■■□□□ 1.6
LRCH1-201ENST00000311191 MLECQ14165 292 aa25.04■■□□□ 1.6
LRCH1-201ENST00000311191 CCDC18Q5T9S5 1454 aa25.02■■□□□ 1.6
LRCH1-201ENST00000311191 NEFMP07197 916 aa25.01■■□□□ 1.59
LRCH1-201ENST00000311191 SNAPC4Q5SXM2 1469 aa25■■□□□ 1.59
LRCH1-201ENST00000311191 MAGI1Q96QZ7 1491 aaPredicted RBP24.97■■□□□ 1.59
LRCH1-201ENST00000311191 PRG4Q92954 1404 aaPredicted RBP24.97■■□□□ 1.59
LRCH1-201ENST00000311191 TONSLQ96HA7 1378 aa24.93■■□□□ 1.58
LRCH1-201ENST00000311191 RRP7BPQ9NSQ0 103 aa24.93■■□□□ 1.58
LRCH1-201ENST00000311191 SPAG9O60271 1321 aaKnown RBP24.9■■□□□ 1.58
LRCH1-201ENST00000311191 SYNJ2O15056 1496 aa24.9■■□□□ 1.58
LRCH1-201ENST00000311191 GGT6Q6P531 493 aa24.87■■□□□ 1.57
LRCH1-201ENST00000311191 SYNJ1O43426 1573 aa24.87■■□□□ 1.57
LRCH1-201ENST00000311191 FHOD3Q2V2M9 1422 aa24.86■■□□□ 1.57
LRCH1-201ENST00000311191 ARHGAP35Q9NRY4 1499 aa24.85■■□□□ 1.57
LRCH1-201ENST00000311191 ABCA10Q8WWZ4 1543 aa24.85■■□□□ 1.57
LRCH1-201ENST00000311191 VPS8Q8N3P4 1428 aa24.84■■□□□ 1.57
LRCH1-201ENST00000311191 TOP2BQ02880 1626 aa24.82■■□□□ 1.56
LRCH1-201ENST00000311191 CUX1P39880 1505 aa24.79■■□□□ 1.56
LRCH1-201ENST00000311191 ANKRD30AQ9BXX3 1397 aa24.78■■□□□ 1.56
LRCH1-201ENST00000311191 HAP1P54257 671 aaPredicted RBP24.76■■□□□ 1.55
LRCH1-201ENST00000311191 KIAA0586Q9BVV6 1533 aa24.75■■□□□ 1.55
LRCH1-201ENST00000311191 EID1Q9Y6B2 187 aa24.74■■□□□ 1.55
LRCH1-201ENST00000311191 URB2Q14146 1524 aaKnown RBP24.74■■□□□ 1.55
LRCH1-201ENST00000311191 SLC24A1O60721 1099 aa24.71■■□□□ 1.55
LRCH1-201ENST00000311191 CENPBP07199 599 aaPredicted RBP24.71■■□□□ 1.55
LRCH1-201ENST00000311191 SCAF1Q9H7N4 1312 aaKnown RBP24.7■■□□□ 1.54
LRCH1-201ENST00000311191 CNGB1Q14028 1251 aaPredicted RBP24.69■■□□□ 1.54
LRCH1-201ENST00000311191 ERICH3Q5RHP9 1530 aa24.69■■□□□ 1.54
LRCH1-201ENST00000311191 KIF3BO15066 747 aa24.67■■□□□ 1.54
LRCH1-201ENST00000311191 NEFLP07196 543 aa24.66■■□□□ 1.54
LRCH1-201ENST00000311191 WASHC2CQ9Y4E1 1318 aa24.66■■□□□ 1.54
LRCH1-201ENST00000311191 KDM2AQ9Y2K7 1162 aa24.63■■□□□ 1.53
LRCH1-201ENST00000311191 GRIN2AQ12879 1464 aa24.62■■□□□ 1.53
LRCH1-201ENST00000311191 CDCA8Q53HL2 280 aa24.62■■□□□ 1.53
LRCH1-201ENST00000311191 POGZQ7Z3K3 1410 aa24.59■■□□□ 1.53
LRCH1-201ENST00000311191 POGKQ9P215 609 aa24.59■■□□□ 1.53
LRCH1-201ENST00000311191 UACAQ9BZF9 1416 aa24.57■■□□□ 1.52
LRCH1-201ENST00000311191 HNRNPMP52272 730 aaKnown RBP eCLIP24.57■■□□□ 1.525e-7■■■□□ 17.2
LRCH1-201ENST00000311191 CUL7Q14999 1698 aa24.57■■□□□ 1.52
LRCH1-201ENST00000311191 EFCAB5A4FU69 1503 aa24.55■■□□□ 1.52
LRCH1-201ENST00000311191 RGL3Q3MIN7 710 aa24.54■■□□□ 1.52
LRCH1-201ENST00000311191 WDR62O43379 1518 aa24.5■■□□□ 1.51
LRCH1-201ENST00000311191 PRDM2Q13029 1718 aa24.5■■□□□ 1.51
LRCH1-201ENST00000311191 ZNF608Q9ULD9 1512 aaPredicted RBP24.48■■□□□ 1.51
LRCH1-201ENST00000311191 PLEKHH2Q8IVE3 1493 aa24.48■■□□□ 1.51
LRCH1-201ENST00000311191 RUSC2Q8N2Y8 1516 aa24.47■■□□□ 1.51
LRCH1-201ENST00000311191 ANP32CO43423 234 aa24.46■■□□□ 1.51
LRCH1-201ENST00000311191 IQGAP2Q13576 1575 aa24.44■■□□□ 1.5
LRCH1-201ENST00000311191 NUP155O75694 1391 aa24.4■■□□□ 1.5
LRCH1-201ENST00000311191 CASKIN1Q8WXD9 1431 aa24.38■■□□□ 1.49
LRCH1-201ENST00000311191 PLB1Q6P1J6 1458 aa24.38■■□□□ 1.49
LRCH1-201ENST00000311191 KIF21BO75037 1637 aa24.37■■□□□ 1.49
LRCH1-201ENST00000311191 PRXQ9BXM0 1461 aa24.36■■□□□ 1.49
LRCH1-201ENST00000311191 MYOM3Q5VTT5 1437 aa24.36■■□□□ 1.49
LRCH1-201ENST00000311191 NPM2Q86SE8 214 aaKnown RBP24.35■■□□□ 1.49
LRCH1-201ENST00000311191 ARHGAP5Q13017 1502 aa24.34■■□□□ 1.49
LRCH1-201ENST00000311191 WDR97A6NE52 1622 aa24.33■■□□□ 1.48
LRCH1-201ENST00000311191 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.32■■□□□ 1.48
LRCH1-201ENST00000311191 LMOD2Q6P5Q4 547 aa24.32■■□□□ 1.48
LRCH1-201ENST00000311191 SENP3Q9H4L4 574 aaPredicted RBP24.31■■□□□ 1.48
LRCH1-201ENST00000311191 HRCP23327 699 aa24.3■■□□□ 1.48
LRCH1-201ENST00000311191 TEX14Q8IWB6 1497 aa24.29■■□□□ 1.48
LRCH1-201ENST00000311191 PKD2Q13563 968 aa24.29■■□□□ 1.48
LRCH1-201ENST00000311191 TMC1Q8TDI8 760 aa24.29■■□□□ 1.48
LRCH1-201ENST00000311191 CD109Q6YHK3 1445 aa24.29■■□□□ 1.48
LRCH1-201ENST00000311191 KIF21AQ7Z4S6 1674 aa24.29■■□□□ 1.48
LRCH1-201ENST00000311191 FYCO1Q9BQS8 1478 aa24.28■■□□□ 1.48
LRCH1-201ENST00000311191 KANK4Q5T7N3 995 aaPredicted RBP24.28■■□□□ 1.48
LRCH1-201ENST00000311191 EIF4G2P78344 907 aaKnown RBP eCLIP24.27■■□□□ 1.481e-6■■■□□ 16.6
LRCH1-201ENST00000311191 ZBTB7CA1YPR0 619 aa24.27■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms