RNA–Protein interactions for RNA: ENST00000310614.11

MRPL48-201, Transcript of mitochondrial ribosomal protein L48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL48, Length 1,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL48-201ENST00000310614 CHD1O14646 1710 aa20.47■□□□□ 0.87
MRPL48-201ENST00000310614 NUP160Q12769 1436 aa20.45■□□□□ 0.86
MRPL48-201ENST00000310614 CEP162Q5TB80 1403 aa20.45■□□□□ 0.86
MRPL48-201ENST00000310614 KIAA0586Q9BVV6 1533 aa20.43■□□□□ 0.86
MRPL48-201ENST00000310614 CEP170Q5SW79 1584 aa20.42■□□□□ 0.86
MRPL48-201ENST00000310614 RANGAP1P46060 587 aaPredicted RBP20.42■□□□□ 0.86
MRPL48-201ENST00000310614 IQGAP2Q13576 1575 aa20.41■□□□□ 0.86
MRPL48-201ENST00000310614 CLIP1P30622 1438 aa20.41■□□□□ 0.86
MRPL48-201ENST00000310614 EFCAB5A4FU69 1503 aa20.33■□□□□ 0.84
MRPL48-201ENST00000310614 OSCARQ8IYS5 282 aa20.32■□□□□ 0.84
MRPL48-201ENST00000310614 UGGT2Q9NYU1 1516 aa20.3■□□□□ 0.84
MRPL48-201ENST00000310614 ARHGAP35Q9NRY4 1499 aa20.28■□□□□ 0.84
MRPL48-201ENST00000310614 JPH4Q96JJ6 628 aa20.27■□□□□ 0.84
MRPL48-201ENST00000310614 CLASP1Q7Z460 1538 aa20.27■□□□□ 0.84
MRPL48-201ENST00000310614 SAMD9Q5K651 1589 aa20.25■□□□□ 0.83
MRPL48-201ENST00000310614 CARMIL2Q6F5E8 1435 aa20.25■□□□□ 0.83
MRPL48-201ENST00000310614 P3H3Q8IVL6 736 aa20.22■□□□□ 0.83
MRPL48-201ENST00000310614 ARAP1Q96P48 1450 aa20.21■□□□□ 0.83
MRPL48-201ENST00000310614 KIAA0556O60303 1618 aa20.2■□□□□ 0.82
MRPL48-201ENST00000310614 SHROOM2Q13796 1616 aa20.2■□□□□ 0.82
MRPL48-201ENST00000310614 FHOD3Q2V2M9 1422 aa20.19■□□□□ 0.82
MRPL48-201ENST00000310614 PRG4Q92954 1404 aaPredicted RBP20.19■□□□□ 0.82
MRPL48-201ENST00000310614 DISP1Q96F81 1524 aa20.19■□□□□ 0.82
MRPL48-201ENST00000310614 VPS8Q8N3P4 1428 aa20.18■□□□□ 0.82
MRPL48-201ENST00000310614 FMN1Q68DA7 1419 aa20.16■□□□□ 0.82
MRPL48-201ENST00000310614 TTBK1Q5TCY1 1321 aaPredicted RBP20.06■□□□□ 0.8
MRPL48-201ENST00000310614 APLP2Q06481 763 aa20.05■□□□□ 0.8
MRPL48-201ENST00000310614 PTPRGP23470 1445 aa20.05■□□□□ 0.8
MRPL48-201ENST00000310614 FYCO1Q9BQS8 1478 aa20.03■□□□□ 0.8
MRPL48-201ENST00000310614 CASKIN1Q8WXD9 1431 aa20.03■□□□□ 0.8
MRPL48-201ENST00000310614 ERCC6L2Q5T890 1561 aa20.02■□□□□ 0.8
MRPL48-201ENST00000310614 ATP1B4Q9UN42 357 aaPredicted RBP20.01■□□□□ 0.79
MRPL48-201ENST00000310614 PCF11O94913 1555 aaKnown RBP20.01■□□□□ 0.79
MRPL48-201ENST00000310614 HECW1Q76N89 1606 aa19.97■□□□□ 0.79
MRPL48-201ENST00000310614 RAPGEF6Q8TEU7 1601 aa19.96■□□□□ 0.79
MRPL48-201ENST00000310614 ARHGEF11O15085 1522 aa19.94■□□□□ 0.78
MRPL48-201ENST00000310614 PLB1Q6P1J6 1458 aa19.93■□□□□ 0.78
MRPL48-201ENST00000310614 UACAQ9BZF9 1416 aa19.93■□□□□ 0.78
MRPL48-201ENST00000310614 ABCA8O94911 1581 aa19.92■□□□□ 0.78
MRPL48-201ENST00000310614 CCDC18Q5T9S5 1454 aa19.92■□□□□ 0.78
MRPL48-201ENST00000310614 MAP3K1Q13233 1512 aa19.9■□□□□ 0.78
MRPL48-201ENST00000310614 HRCP23327 699 aa19.87■□□□□ 0.77
MRPL48-201ENST00000310614 NUP153P49790 1475 aaKnown RBP19.87■□□□□ 0.77
MRPL48-201ENST00000310614 ABCC2Q92887 1545 aa19.87■□□□□ 0.77
MRPL48-201ENST00000310614 TIAM1Q13009 1591 aa19.86■□□□□ 0.77
MRPL48-201ENST00000310614 EPRSP07814 1512 aaKnown RBP19.86■□□□□ 0.77
MRPL48-201ENST00000310614 RIMBP3CA6NJZ7 1639 aa19.86■□□□□ 0.77
MRPL48-201ENST00000310614 RIMBP3BA6NNM3 1639 aa19.86■□□□□ 0.77
MRPL48-201ENST00000310614 RIMBP3Q9UFD9 1639 aa19.86■□□□□ 0.77
MRPL48-201ENST00000310614 UHRF1BP1LA0JNW5 1464 aa19.85■□□□□ 0.77
MRPL48-201ENST00000310614 CFAP43Q8NDM7 1665 aa19.85■□□□□ 0.77
MRPL48-201ENST00000310614 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.84■□□□□ 0.77
MRPL48-201ENST00000310614 HNRNPUL2Q1KMD3 747 aaKnown RBP19.84■□□□□ 0.77
MRPL48-201ENST00000310614 ARID3CA6NKF2 412 aa19.82■□□□□ 0.76
MRPL48-201ENST00000310614 CDK11AQ9UQ88 783 aaPredicted RBP19.82■□□□□ 0.76
MRPL48-201ENST00000310614 CDK13Q14004 1512 aaKnown RBP19.8■□□□□ 0.76
MRPL48-201ENST00000310614 MTUS2Q5JR59 1369 aa19.78■□□□□ 0.76
MRPL48-201ENST00000310614 PPARGC1BQ86YN6 1023 aaKnown RBP19.78■□□□□ 0.76
MRPL48-201ENST00000310614 LRRC9Q6ZRR7 1453 aa19.78■□□□□ 0.76
MRPL48-201ENST00000310614 LRRIQ1Q96JM4 1722 aa19.77■□□□□ 0.76
MRPL48-201ENST00000310614 ATP10BO94823 1461 aa19.77■□□□□ 0.75
MRPL48-201ENST00000310614 ADCY10Q96PN6 1610 aa19.76■□□□□ 0.75
MRPL48-201ENST00000310614 NPM1P06748 294 aaKnown RBP eCLIP19.75■□□□□ 0.75
MRPL48-201ENST00000310614 KANK4Q5T7N3 995 aaPredicted RBP19.75■□□□□ 0.75
MRPL48-201ENST00000310614 CYB5RLQ6IPT4 315 aa19.75■□□□□ 0.75
MRPL48-201ENST00000310614 EHBP1L1Q8N3D4 1523 aa19.75■□□□□ 0.75
MRPL48-201ENST00000310614 KDM5BQ9UGL1 1544 aa19.74■□□□□ 0.75
MRPL48-201ENST00000310614 PLEKHD1A6NEE1 506 aa19.72■□□□□ 0.75
MRPL48-201ENST00000310614 ZCCHC11Q5TAX3 1644 aaKnown RBP19.7■□□□□ 0.74
MRPL48-201ENST00000310614 PCGF6Q9BYE7 350 aa19.7■□□□□ 0.74
MRPL48-201ENST00000310614 TROQ12816 1431 aaPredicted RBP19.69■□□□□ 0.74
MRPL48-201ENST00000310614 MAGI3Q5TCQ9 1506 aa19.66■□□□□ 0.74
MRPL48-201ENST00000310614 SUPT6HQ7KZ85 1726 aaKnown RBP19.66■□□□□ 0.74
MRPL48-201ENST00000310614 DNAJC5Q9H3Z4 198 aa19.63■□□□□ 0.73
MRPL48-201ENST00000310614 KIF14Q15058 1648 aa19.61■□□□□ 0.73
MRPL48-201ENST00000310614 NCOA2Q15596 1464 aa19.61■□□□□ 0.73
MRPL48-201ENST00000310614 SENP3Q9H4L4 574 aaPredicted RBP19.61■□□□□ 0.73
MRPL48-201ENST00000310614 WDR7Q9Y4E6 1490 aa19.59■□□□□ 0.73
MRPL48-201ENST00000310614 ASXL2Q76L83 1435 aa19.58■□□□□ 0.73
MRPL48-201ENST00000310614 PHF23Q9BUL5 403 aaPredicted RBP19.58■□□□□ 0.73
MRPL48-201ENST00000310614 TRIM26Q12899 539 aaPredicted RBP19.56■□□□□ 0.72
MRPL48-201ENST00000310614 CCNB3Q8WWL7 1395 aa19.55■□□□□ 0.72
MRPL48-201ENST00000310614 KCNH8Q96L42 1107 aa19.55■□□□□ 0.72
MRPL48-201ENST00000310614 PHLDB1Q86UU1 1377 aa19.54■□□□□ 0.72
MRPL48-201ENST00000310614 MAPKBP1O60336 1514 aa19.54■□□□□ 0.72
MRPL48-201ENST00000310614 MYOM3Q5VTT5 1437 aa19.52■□□□□ 0.72
MRPL48-201ENST00000310614 ABCC10Q5T3U5 1492 aa19.48■□□□□ 0.71
MRPL48-201ENST00000310614 ITSN2Q9NZM3 1697 aa19.48■□□□□ 0.71
MRPL48-201ENST00000310614 RRBP1Q9P2E9 1410 aaKnown RBP19.48■□□□□ 0.71
MRPL48-201ENST00000310614 FGD6Q6ZV73 1430 aa19.47■□□□□ 0.71
MRPL48-201ENST00000310614 MIA2Q96PC5 1412 aa19.47■□□□□ 0.71
MRPL48-201ENST00000310614 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.47■□□□□ 0.71
MRPL48-201ENST00000310614 CFDP1Q9UEE9 299 aaPredicted RBP19.45■□□□□ 0.7
MRPL48-201ENST00000310614 GPATCH8Q9UKJ3 1502 aaKnown RBP19.45■□□□□ 0.7
MRPL48-201ENST00000310614 TTC37Q6PGP7 1564 aa19.44■□□□□ 0.7
MRPL48-201ENST00000310614 FAM50AQ14320 339 aaKnown RBP19.41■□□□□ 0.7
MRPL48-201ENST00000310614 ABCA9Q8IUA7 1624 aa19.41■□□□□ 0.7
MRPL48-201ENST00000310614 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.4■□□□□ 0.7
MRPL48-201ENST00000310614 MYO5CQ9NQX4 1742 aa19.4■□□□□ 0.7
MRPL48-201ENST00000310614 PTPN23Q9H3S7 1636 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms