RNA–Protein interactions for RNA: ENST00000309828.4

EIF3F-201, Transcript of eukaryotic translation initiation factor 3 subunit F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EIF3F, Length 1,254 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3F-201ENST00000309828 GRIN2AQ12879 1464 aa22.23■■□□□ 1.15
EIF3F-201ENST00000309828 ARHGAP35Q9NRY4 1499 aa22.22■■□□□ 1.15
EIF3F-201ENST00000309828 EFCAB5A4FU69 1503 aa22.22■■□□□ 1.15
EIF3F-201ENST00000309828 ARAP1Q96P48 1450 aa22.21■■□□□ 1.15
EIF3F-201ENST00000309828 RANGAP1P46060 587 aaPredicted RBP22.18■■□□□ 1.14
EIF3F-201ENST00000309828 CHMP7Q8WUX9 453 aaPredicted RBP22.16■■□□□ 1.14
EIF3F-201ENST00000309828 IQGAP2Q13576 1575 aa22.15■■□□□ 1.14
EIF3F-201ENST00000309828 KIAA0586Q9BVV6 1533 aa22.14■■□□□ 1.13
EIF3F-201ENST00000309828 SAMD9Q5K651 1589 aa22.11■■□□□ 1.13
EIF3F-201ENST00000309828 NUP160Q12769 1436 aa22.1■■□□□ 1.13
EIF3F-201ENST00000309828 UGGT2Q9NYU1 1516 aa22.07■■□□□ 1.12
EIF3F-201ENST00000309828 CEP170Q5SW79 1584 aa22.06■■□□□ 1.12
EIF3F-201ENST00000309828 FBLN2P98095 1184 aa22.03■■□□□ 1.12
EIF3F-201ENST00000309828 FHOD3Q2V2M9 1422 aa22■■□□□ 1.11
EIF3F-201ENST00000309828 FMN1Q68DA7 1419 aa22■■□□□ 1.11
EIF3F-201ENST00000309828 APLP2Q06481 763 aa21.99■■□□□ 1.11
EIF3F-201ENST00000309828 CHD1O14646 1710 aa21.99■■□□□ 1.11
EIF3F-201ENST00000309828 TRIM26Q12899 539 aaPredicted RBP21.96■■□□□ 1.11
EIF3F-201ENST00000309828 P3H3Q8IVL6 736 aa21.94■■□□□ 1.1
EIF3F-201ENST00000309828 MAP3K1Q13233 1512 aa21.94■■□□□ 1.1
EIF3F-201ENST00000309828 KIAA0556O60303 1618 aa21.92■■□□□ 1.1
EIF3F-201ENST00000309828 FYCO1Q9BQS8 1478 aa21.92■■□□□ 1.1
EIF3F-201ENST00000309828 CASKIN1Q8WXD9 1431 aa21.92■■□□□ 1.1
EIF3F-201ENST00000309828 DISP1Q96F81 1524 aa21.9■■□□□ 1.1
EIF3F-201ENST00000309828 PCF11O94913 1555 aaKnown RBP21.9■■□□□ 1.1
EIF3F-201ENST00000309828 JPH4Q96JJ6 628 aa21.87■■□□□ 1.09
EIF3F-201ENST00000309828 CARMIL2Q6F5E8 1435 aa21.87■■□□□ 1.09
EIF3F-201ENST00000309828 PPARGC1BQ86YN6 1023 aaKnown RBP21.84■■□□□ 1.09
EIF3F-201ENST00000309828 TIAM1Q13009 1591 aa21.83■■□□□ 1.09
EIF3F-201ENST00000309828 CFAP43Q8NDM7 1665 aa21.82■■□□□ 1.08
EIF3F-201ENST00000309828 SHROOM2Q13796 1616 aa21.81■■□□□ 1.08
EIF3F-201ENST00000309828 PCGF6Q9BYE7 350 aa21.81■■□□□ 1.08
EIF3F-201ENST00000309828 CLASP1Q7Z460 1538 aa21.8■■□□□ 1.08
EIF3F-201ENST00000309828 HECW1Q76N89 1606 aa21.77■■□□□ 1.08
EIF3F-201ENST00000309828 PRG4Q92954 1404 aaPredicted RBP21.74■■□□□ 1.07
EIF3F-201ENST00000309828 CCDC18Q5T9S5 1454 aa21.74■■□□□ 1.07
EIF3F-201ENST00000309828 LRRC9Q6ZRR7 1453 aa21.73■■□□□ 1.07
EIF3F-201ENST00000309828 KANK4Q5T7N3 995 aaPredicted RBP21.72■■□□□ 1.07
EIF3F-201ENST00000309828 OSCARQ8IYS5 282 aa21.71■■□□□ 1.07
EIF3F-201ENST00000309828 ATP1B4Q9UN42 357 aaPredicted RBP21.71■■□□□ 1.07
EIF3F-201ENST00000309828 RAPGEF6Q8TEU7 1601 aa21.69■■□□□ 1.06
EIF3F-201ENST00000309828 TTBK1Q5TCY1 1321 aaPredicted RBP21.68■■□□□ 1.06
EIF3F-201ENST00000309828 LRRIQ1Q96JM4 1722 aa21.66■■□□□ 1.06
EIF3F-201ENST00000309828 EPRSP07814 1512 aaKnown RBP21.65■■□□□ 1.06
EIF3F-201ENST00000309828 ABCA8O94911 1581 aa21.62■■□□□ 1.05
EIF3F-201ENST00000309828 NUP153P49790 1475 aaKnown RBP21.62■■□□□ 1.05
EIF3F-201ENST00000309828 PTPRGP23470 1445 aa21.62■■□□□ 1.05
EIF3F-201ENST00000309828 EHBP1L1Q8N3D4 1523 aa21.6■■□□□ 1.05
EIF3F-201ENST00000309828 MTUS2Q5JR59 1369 aa21.59■■□□□ 1.05
EIF3F-201ENST00000309828 PLB1Q6P1J6 1458 aa21.58■■□□□ 1.05
EIF3F-201ENST00000309828 RRBP1Q9P2E9 1410 aaKnown RBP21.55■■□□□ 1.04
EIF3F-201ENST00000309828 ERCC6L2Q5T890 1561 aa21.55■■□□□ 1.04
EIF3F-201ENST00000309828 CDK13Q14004 1512 aaKnown RBP21.55■■□□□ 1.04
EIF3F-201ENST00000309828 CDK11AQ9UQ88 783 aaPredicted RBP21.52■■□□□ 1.04
EIF3F-201ENST00000309828 SUPT6HQ7KZ85 1726 aaKnown RBP21.52■■□□□ 1.03
EIF3F-201ENST00000309828 UACAQ9BZF9 1416 aa21.51■■□□□ 1.03
EIF3F-201ENST00000309828 MAGI3Q5TCQ9 1506 aa21.5■■□□□ 1.03
EIF3F-201ENST00000309828 PHLDB1Q86UU1 1377 aa21.48■■□□□ 1.03
EIF3F-201ENST00000309828 CCNB3Q8WWL7 1395 aa21.48■■□□□ 1.03
EIF3F-201ENST00000309828 ARHGEF11O15085 1522 aa21.47■■□□□ 1.03
EIF3F-201ENST00000309828 NCOA2Q15596 1464 aa21.46■■□□□ 1.03
EIF3F-201ENST00000309828 ABCC2Q92887 1545 aa21.46■■□□□ 1.03
EIF3F-201ENST00000309828 UHRF1BP1LA0JNW5 1464 aa21.45■■□□□ 1.03
EIF3F-201ENST00000309828 ATP10BO94823 1461 aa21.45■■□□□ 1.02
EIF3F-201ENST00000309828 TROQ12816 1431 aaPredicted RBP21.43■■□□□ 1.02
EIF3F-201ENST00000309828 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.42■■□□□ 1.02
EIF3F-201ENST00000309828 HNRNPUL2Q1KMD3 747 aaKnown RBP21.42■■□□□ 1.02
EIF3F-201ENST00000309828 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.41■■□□□ 1.02
EIF3F-201ENST00000309828 MYOM3Q5VTT5 1437 aa21.4■■□□□ 1.02
EIF3F-201ENST00000309828 ARID3CA6NKF2 412 aa21.4■■□□□ 1.02
EIF3F-201ENST00000309828 ADCY10Q96PN6 1610 aa21.39■■□□□ 1.01
EIF3F-201ENST00000309828 FGD6Q6ZV73 1430 aa21.38■■□□□ 1.01
EIF3F-201ENST00000309828 RIMBP3CA6NJZ7 1639 aa21.37■■□□□ 1.01
EIF3F-201ENST00000309828 RIMBP3BA6NNM3 1639 aa21.37■■□□□ 1.01
EIF3F-201ENST00000309828 RIMBP3Q9UFD9 1639 aa21.37■■□□□ 1.01
EIF3F-201ENST00000309828 PLEKHD1A6NEE1 506 aa21.36■■□□□ 1.01
EIF3F-201ENST00000309828 MIA2Q96PC5 1412 aa21.33■■□□□ 1.01
EIF3F-201ENST00000309828 KDM5BQ9UGL1 1544 aa21.33■■□□□ 1
EIF3F-201ENST00000309828 KIF14Q15058 1648 aa21.31■■□□□ 1
EIF3F-201ENST00000309828 TCOF1Q13428 1488 aaKnown RBP21.29■■□□□ 1
EIF3F-201ENST00000309828 ZCCHC11Q5TAX3 1644 aaKnown RBP21.28■■□□□ 1
EIF3F-201ENST00000309828 PTPN23Q9H3S7 1636 aa21.27■■□□□ 1
EIF3F-201ENST00000309828 ITSN2Q9NZM3 1697 aa21.27■■□□□ 1
EIF3F-201ENST00000309828 FAM50AQ14320 339 aaKnown RBP21.26■□□□□ 0.99
EIF3F-201ENST00000309828 ABCC10Q5T3U5 1492 aa21.24■□□□□ 0.99
EIF3F-201ENST00000309828 GPATCH8Q9UKJ3 1502 aaKnown RBP21.21■□□□□ 0.99
EIF3F-201ENST00000309828 CYB5RLQ6IPT4 315 aa21.18■□□□□ 0.98
EIF3F-201ENST00000309828 HRCP23327 699 aa21.16■□□□□ 0.98
EIF3F-201ENST00000309828 CDC42BPAQ5VT25 1732 aa21.15■□□□□ 0.98
EIF3F-201ENST00000309828 ITGAEP38570 1179 aa21.14■□□□□ 0.97
EIF3F-201ENST00000309828 CFDP1Q9UEE9 299 aaPredicted RBP21.14■□□□□ 0.97
EIF3F-201ENST00000309828 NPM1P06748 294 aaKnown RBP eCLIP21.12■□□□□ 0.97
EIF3F-201ENST00000309828 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.12■□□□□ 0.97
EIF3F-201ENST00000309828 WDR7Q9Y4E6 1490 aa21.12■□□□□ 0.97
EIF3F-201ENST00000309828 PREX2Q70Z35 1606 aa21.11■□□□□ 0.97
EIF3F-201ENST00000309828 CAMSAP2Q08AD1 1489 aa21.1■□□□□ 0.97
EIF3F-201ENST00000309828 ZEB1P37275 1124 aaPredicted RBP21.1■□□□□ 0.97
EIF3F-201ENST00000309828 SETD5Q9C0A6 1442 aa21.09■□□□□ 0.97
EIF3F-201ENST00000309828 DNMT1P26358 1616 aaKnown RBP21.08■□□□□ 0.97
EIF3F-201ENST00000309828 TTC37Q6PGP7 1564 aa21.08■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms