RNA–Protein interactions for RNA: ENST00000309285.3

XCR1-201, Transcript of X-C motif chemokine receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XCR1, Length 5,281 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XCR1-201ENST00000309285 GLIPR1L2Q4G1C9 344 aa12.94□□□□□ -0.34
XCR1-201ENST00000309285 IGF1RP08069 1367 aa12.94□□□□□ -0.34
XCR1-201ENST00000309285 TOP2BQ02880 1626 aa12.93□□□□□ -0.34
XCR1-201ENST00000309285 CCNB3Q8WWL7 1395 aa12.93□□□□□ -0.34
XCR1-201ENST00000309285 KIF21BO75037 1637 aa12.92□□□□□ -0.34
XCR1-201ENST00000309285 FGD5Q6ZNL6 1462 aa12.92□□□□□ -0.34
XCR1-201ENST00000309285 CUX1P39880 1505 aa12.92□□□□□ -0.34
XCR1-201ENST00000309285 PDS5BQ9NTI5 1447 aa12.9□□□□□ -0.34
XCR1-201ENST00000309285 CLSPNQ9HAW4 1339 aa12.9□□□□□ -0.34
XCR1-201ENST00000309285 FHAD1B1AJZ9 1412 aa12.9□□□□□ -0.34
XCR1-201ENST00000309285 ZNF326Q5BKZ1 582 aaKnown RBP12.89□□□□□ -0.35
XCR1-201ENST00000309285 CHIC2Q9UKJ5 165 aa12.89□□□□□ -0.35
XCR1-201ENST00000309285 PRXQ9BXM0 1461 aa12.88□□□□□ -0.35
XCR1-201ENST00000309285 CC2D2AQ9P2K1 1620 aa12.87□□□□□ -0.35
XCR1-201ENST00000309285 MIER1Q8N108 512 aa12.87□□□□□ -0.35
XCR1-201ENST00000309285 RAD54L2Q9Y4B4 1467 aa12.86□□□□□ -0.35
XCR1-201ENST00000309285 CHMP7Q8WUX9 453 aaPredicted RBP12.86□□□□□ -0.35
XCR1-201ENST00000309285 ZNF777Q9ULD5 760 aaPredicted RBP12.85□□□□□ -0.35
XCR1-201ENST00000309285 NESP48681 1621 aa12.84□□□□□ -0.35
XCR1-201ENST00000309285 NBR1Q14596 966 aa12.84□□□□□ -0.35
XCR1-201ENST00000309285 FKBP8Q14318 412 aa12.84□□□□□ -0.35
XCR1-201ENST00000309285 FHOD3Q2V2M9 1422 aa12.83□□□□□ -0.36
XCR1-201ENST00000309285 ARAP1Q96P48 1450 aa12.82□□□□□ -0.36
XCR1-201ENST00000309285 ERICH3Q5RHP9 1530 aa12.82□□□□□ -0.36
XCR1-201ENST00000309285 DNAJC5BQ9UF47 199 aa12.81□□□□□ -0.36
XCR1-201ENST00000309285 RRP7BPQ9NSQ0 103 aa12.8□□□□□ -0.36
XCR1-201ENST00000309285 TONSLQ96HA7 1378 aa12.79□□□□□ -0.36
XCR1-201ENST00000309285 SIN3AQ96ST3 1273 aa12.79□□□□□ -0.36
XCR1-201ENST00000309285 SLC24A1O60721 1099 aa12.77□□□□□ -0.36
XCR1-201ENST00000309285 DDX10Q13206 875 aaKnown RBP12.77□□□□□ -0.36
XCR1-201ENST00000309285 HIRIP3Q9BW71 556 aaPredicted RBP12.77□□□□□ -0.36
XCR1-201ENST00000309285 ARHGAP35Q9NRY4 1499 aa12.77□□□□□ -0.37
XCR1-201ENST00000309285 ERCC6Q03468 1493 aa12.77□□□□□ -0.37
XCR1-201ENST00000309285 ANP32AP39687 249 aaKnown RBP12.76□□□□□ -0.37
XCR1-201ENST00000309285 RAB3GAP2Q9H2M9 1393 aa12.75□□□□□ -0.37
XCR1-201ENST00000309285 FMN1Q68DA7 1419 aa12.75□□□□□ -0.37
XCR1-201ENST00000309285 ANP32CO43423 234 aa12.73□□□□□ -0.37
XCR1-201ENST00000309285 SETD5Q9C0A6 1442 aa12.73□□□□□ -0.37
XCR1-201ENST00000309285 POLA1P09884 1462 aaPredicted RBP12.72□□□□□ -0.37
XCR1-201ENST00000309285 DHX57Q6P158 1386 aaKnown RBP12.72□□□□□ -0.37
XCR1-201ENST00000309285 BIVM-ERCC5R4GMW8 1640 aa12.72□□□□□ -0.37
XCR1-201ENST00000309285 TOPBP1Q92547 1522 aa12.72□□□□□ -0.37
XCR1-201ENST00000309285 NPM2Q86SE8 214 aaKnown RBP12.72□□□□□ -0.37
XCR1-201ENST00000309285 GAPVD1Q14C86 1478 aa12.71□□□□□ -0.37
XCR1-201ENST00000309285 RTN4Q9NQC3 1192 aaKnown RBP12.69□□□□□ -0.38
XCR1-201ENST00000309285 PHLDB1Q86UU1 1377 aa12.66□□□□□ -0.38
XCR1-201ENST00000309285 PLPPR3Q6T4P5 718 aa12.66□□□□□ -0.38
XCR1-201ENST00000309285 CFDP1Q9UEE9 299 aaPredicted RBP12.65□□□□□ -0.38
XCR1-201ENST00000309285 DNMBPQ6XZF7 1577 aa12.64□□□□□ -0.39
XCR1-201ENST00000309285 PLEKHD1A6NEE1 506 aa12.64□□□□□ -0.39
XCR1-201ENST00000309285 AQRO60306 1485 aaKnown RBP eCLIP12.64□□□□□ -0.39
XCR1-201ENST00000309285 LRRC9Q6ZRR7 1453 aa12.63□□□□□ -0.39
XCR1-201ENST00000309285 RRBP1Q9P2E9 1410 aaKnown RBP12.62□□□□□ -0.39
XCR1-201ENST00000309285 TSPY4P0CV99 314 aa12.61□□□□□ -0.39
XCR1-201ENST00000309285 TSPY10P0CW01 314 aa12.61□□□□□ -0.39
XCR1-201ENST00000309285 ABCA10Q8WWZ4 1543 aa12.61□□□□□ -0.39
XCR1-201ENST00000309285 ZBTB47Q9UFB7 747 aaPredicted RBP12.61□□□□□ -0.39
XCR1-201ENST00000309285 CASKIN1Q8WXD9 1431 aa12.57□□□□□ -0.4
XCR1-201ENST00000309285 TIMELESSQ9UNS1 1208 aa12.57□□□□□ -0.4
XCR1-201ENST00000309285 LAMC3Q9Y6N6 1575 aa12.56□□□□□ -0.4
XCR1-201ENST00000309285 URB2Q14146 1524 aaKnown RBP12.56□□□□□ -0.4
XCR1-201ENST00000309285 CANXP27824 592 aaKnown RBP12.55□□□□□ -0.4
XCR1-201ENST00000309285 KCNH8Q96L42 1107 aa12.55□□□□□ -0.4
XCR1-201ENST00000309285 FOXD1Q16676 465 aa12.55□□□□□ -0.4
XCR1-201ENST00000309285 JPH4Q96JJ6 628 aa12.54□□□□□ -0.4
XCR1-201ENST00000309285 TIAM1Q13009 1591 aa12.54□□□□□ -0.4
XCR1-201ENST00000309285 EIF4G2P78344 907 aaKnown RBP eCLIP12.54□□□□□ -0.4
XCR1-201ENST00000309285 CHGAP10645 457 aaKnown RBP12.54□□□□□ -0.4
XCR1-201ENST00000309285 PPP1R15AO75807 674 aaPredicted RBP12.53□□□□□ -0.4
XCR1-201ENST00000309285 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.53□□□□□ -0.4
XCR1-201ENST00000309285 FGD6Q6ZV73 1430 aa12.53□□□□□ -0.4
XCR1-201ENST00000309285 FYCO1Q9BQS8 1478 aa12.53□□□□□ -0.4
XCR1-201ENST00000309285 NEFMP07197 916 aa12.52□□□□□ -0.41
XCR1-201ENST00000309285 ESF1Q9H501 851 aaKnown RBP12.51□□□□□ -0.41
XCR1-201ENST00000309285 CARMIL2Q6F5E8 1435 aa12.51□□□□□ -0.41
XCR1-201ENST00000309285 ARXQ96QS3 562 aa12.51□□□□□ -0.41
XCR1-201ENST00000309285 KDM2AQ9Y2K7 1162 aa12.51□□□□□ -0.41
XCR1-201ENST00000309285 EFCAB5A4FU69 1503 aa12.51□□□□□ -0.41
XCR1-201ENST00000309285 IRX6P78412 446 aaPredicted RBP12.5□□□□□ -0.41
XCR1-201ENST00000309285 DEKP35659 375 aaKnown RBP12.5□□□□□ -0.41
XCR1-201ENST00000309285 GRIN2BQ13224 1484 aa12.5□□□□□ -0.41
XCR1-201ENST00000309285 MRC2Q9UBG0 1479 aa12.49□□□□□ -0.41
XCR1-201ENST00000309285 MPHOSPH9Q99550 1183 aa12.49□□□□□ -0.41
XCR1-201ENST00000309285 SUPT16HQ9Y5B9 1047 aaKnown RBP12.49□□□□□ -0.41
XCR1-201ENST00000309285 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.49□□□□□ -0.41
XCR1-201ENST00000309285 MYOM3Q5VTT5 1437 aa12.48□□□□□ -0.41
XCR1-201ENST00000309285 HNRNPUQ00839 825 aaKnown RBP eCLIP12.48□□□□□ -0.41
XCR1-201ENST00000309285 NCOA2Q15596 1464 aa12.47□□□□□ -0.41
XCR1-201ENST00000309285 CCDC18Q5T9S5 1454 aa12.47□□□□□ -0.41
XCR1-201ENST00000309285 PCF11O94913 1555 aaKnown RBP12.47□□□□□ -0.41
XCR1-201ENST00000309285 STAG3Q9UJ98 1225 aa12.47□□□□□ -0.41
XCR1-201ENST00000309285 ANP32BQ92688 251 aaKnown RBP12.46□□□□□ -0.41
XCR1-201ENST00000309285 ZNF644Q9H582 1327 aaPredicted RBP12.45□□□□□ -0.42
XCR1-201ENST00000309285 FAM9BQ8IZU0 186 aa12.45□□□□□ -0.42
XCR1-201ENST00000309285 CUL7Q14999 1698 aa12.44□□□□□ -0.42
XCR1-201ENST00000309285 MAP3K1Q13233 1512 aa12.43□□□□□ -0.42
XCR1-201ENST00000309285 IFT140Q96RY7 1462 aa12.42□□□□□ -0.42
XCR1-201ENST00000309285 PRKCSHP14314 528 aaPredicted RBP12.42□□□□□ -0.42
XCR1-201ENST00000309285 RGL3Q3MIN7 710 aa12.42□□□□□ -0.42
XCR1-201ENST00000309285 L3MBTL2Q969R5 705 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms