RNA–Protein interactions for RNA: ENST00000307712.10

SEC23A-201, Transcript of Sec23 homolog A, coat complex II component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC23A, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-201ENST00000307712 RAPGEF2Q9Y4G8 1499 aa18.39■□□□□ 0.53
SEC23A-201ENST00000307712 MYT1LQ9UL68 1186 aa18.38■□□□□ 0.53
SEC23A-201ENST00000307712 RAB3GAP2Q9H2M9 1393 aa18.38■□□□□ 0.53
SEC23A-201ENST00000307712 SENP3-EIF4A1A0A087X0R7 540 aa18.37■□□□□ 0.53
SEC23A-201ENST00000307712 CCER2I3L3R5 266 aa18.36■□□□□ 0.53
SEC23A-201ENST00000307712 EIF4G2P78344 907 aaKnown RBP eCLIP18.34■□□□□ 0.53
SEC23A-201ENST00000307712 B4GALNT3Q6L9W6 998 aa18.34■□□□□ 0.53
SEC23A-201ENST00000307712 KIF27Q86VH2 1401 aa18.33■□□□□ 0.53
SEC23A-201ENST00000307712 RRP7BPQ9NSQ0 103 aa18.33■□□□□ 0.52
SEC23A-201ENST00000307712 ZBTB47Q9UFB7 747 aaPredicted RBP18.33■□□□□ 0.52
SEC23A-201ENST00000307712 SALL2Q9Y467 1007 aaPredicted RBP18.31■□□□□ 0.52
SEC23A-201ENST00000307712 BAZ1BQ9UIG0 1483 aaKnown RBP18.31■□□□□ 0.52
SEC23A-201ENST00000307712 PPP4R2Q9NY27 417 aa18.31■□□□□ 0.52
SEC23A-201ENST00000307712 MTUS2Q5JR59 1369 aa18.3■□□□□ 0.52
SEC23A-201ENST00000307712 SETD5Q9C0A6 1442 aa18.3■□□□□ 0.52
SEC23A-201ENST00000307712 PPP1R15AO75807 674 aaPredicted RBP18.26■□□□□ 0.51
SEC23A-201ENST00000307712 TIMELESSQ9UNS1 1208 aa18.26■□□□□ 0.51
SEC23A-201ENST00000307712 TMC1Q8TDI8 760 aa18.23■□□□□ 0.51
SEC23A-201ENST00000307712 DEKP35659 375 aaKnown RBP18.2■□□□□ 0.5
SEC23A-201ENST00000307712 SMARCA2P51531 1590 aa18.2■□□□□ 0.5
SEC23A-201ENST00000307712 NOP58Q9Y2X3 529 aaKnown RBP18.18■□□□□ 0.5
SEC23A-201ENST00000307712 ZNF777Q9ULD5 760 aaPredicted RBP18.17■□□□□ 0.5
SEC23A-201ENST00000307712 SMARCA4P51532 1647 aa18.15■□□□□ 0.5
SEC23A-201ENST00000307712 HSPA5P11021 654 aaKnown RBP18.14■□□□□ 0.49
SEC23A-201ENST00000307712 EIF5BO60841 1220 aaKnown RBP18.12■□□□□ 0.49
SEC23A-201ENST00000307712 KIF21BO75037 1637 aa18.12■□□□□ 0.49
SEC23A-201ENST00000307712 CARMIL1Q5VZK9 1371 aa18.1■□□□□ 0.49
SEC23A-201ENST00000307712 SLC4A1APQ9BWU0 796 aaKnown RBP18.09■□□□□ 0.49
SEC23A-201ENST00000307712 RTN4Q9NQC3 1192 aaKnown RBP18.08■□□□□ 0.48
SEC23A-201ENST00000307712 CUX2O14529 1486 aa18.07■□□□□ 0.48
SEC23A-201ENST00000307712 FHAD1B1AJZ9 1412 aa18.06■□□□□ 0.48
SEC23A-201ENST00000307712 KDM2AQ9Y2K7 1162 aa18.05■□□□□ 0.48
SEC23A-201ENST00000307712 LAS1LQ9Y4W2 734 aaKnown RBP18.05■□□□□ 0.48
SEC23A-201ENST00000307712 ERICH6BQ5W0A0 696 aa18.03■□□□□ 0.48
SEC23A-201ENST00000307712 FOXD1Q16676 465 aa18.02■□□□□ 0.48
SEC23A-201ENST00000307712 FANCIQ9NVI1 1328 aa18■□□□□ 0.47
SEC23A-201ENST00000307712 ARHGAP35Q9NRY4 1499 aa17.99■□□□□ 0.47
SEC23A-201ENST00000307712 NEFMP07197 916 aa17.97■□□□□ 0.47
SEC23A-201ENST00000307712 ARAP1Q96P48 1450 aa17.95■□□□□ 0.46
SEC23A-201ENST00000307712 SYNJ1O43426 1573 aa17.94■□□□□ 0.46
SEC23A-201ENST00000307712 FBLN2P98095 1184 aa17.94■□□□□ 0.46
SEC23A-201ENST00000307712 RRBP1Q9P2E9 1410 aaKnown RBP17.94■□□□□ 0.46
SEC23A-201ENST00000307712 ATAD2BQ9ULI0 1458 aa17.93■□□□□ 0.46
SEC23A-201ENST00000307712 CANXP27824 592 aaKnown RBP17.92■□□□□ 0.46
SEC23A-201ENST00000307712 L3MBTL2Q969R5 705 aa17.92■□□□□ 0.46
SEC23A-201ENST00000307712 PHLDB1Q86UU1 1377 aa17.9■□□□□ 0.46
SEC23A-201ENST00000307712 FHOD3Q2V2M9 1422 aa17.89■□□□□ 0.45
SEC23A-201ENST00000307712 MSH5O43196 834 aa17.89■□□□□ 0.45
SEC23A-201ENST00000307712 PRKRIP1Q9H875 184 aaPredicted RBP17.88■□□□□ 0.45
SEC23A-201ENST00000307712 MPHOSPH9Q99550 1183 aa17.87■□□□□ 0.45
SEC23A-201ENST00000307712 IPO9Q96P70 1041 aaKnown RBP17.86■□□□□ 0.45
SEC23A-201ENST00000307712 CARD11Q9BXL7 1154 aa17.86■□□□□ 0.45
SEC23A-201ENST00000307712 PPM1GO15355 546 aaPredicted RBP17.85■□□□□ 0.45
SEC23A-201ENST00000307712 ARXQ96QS3 562 aa17.85■□□□□ 0.45
SEC23A-201ENST00000307712 DDRGK1Q96HY6 314 aa17.83■□□□□ 0.44
SEC23A-201ENST00000307712 NUDCQ9Y266 331 aa17.83■□□□□ 0.44
SEC23A-201ENST00000307712 WDR97A6NE52 1622 aa17.82■□□□□ 0.44
SEC23A-201ENST00000307712 FMN1Q68DA7 1419 aa17.81■□□□□ 0.44
SEC23A-201ENST00000307712 RGL3Q3MIN7 710 aa17.79■□□□□ 0.44
SEC23A-201ENST00000307712 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.79■□□□□ 0.44
SEC23A-201ENST00000307712 ZBED9Q6R2W3 1325 aa17.79■□□□□ 0.44
SEC23A-201ENST00000307712 WASHC2AQ641Q2 1341 aa17.78■□□□□ 0.44
SEC23A-201ENST00000307712 WDR43Q15061 677 aaKnown RBP eCLIP17.78■□□□□ 0.44
SEC23A-201ENST00000307712 IGF1RP08069 1367 aa17.78■□□□□ 0.44
SEC23A-201ENST00000307712 PRXQ9BXM0 1461 aa17.78■□□□□ 0.44
SEC23A-201ENST00000307712 CCDC18Q5T9S5 1454 aa17.77■□□□□ 0.44
SEC23A-201ENST00000307712 TSPY4P0CV99 314 aa17.77■□□□□ 0.43
SEC23A-201ENST00000307712 TSPY10P0CW01 314 aa17.77■□□□□ 0.43
SEC23A-201ENST00000307712 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.77■□□□□ 0.43
SEC23A-201ENST00000307712 CCDC184Q52MB2 194 aa17.76■□□□□ 0.43
SEC23A-201ENST00000307712 LRRC9Q6ZRR7 1453 aa17.76■□□□□ 0.43
SEC23A-201ENST00000307712 CFDP1Q9UEE9 299 aaPredicted RBP17.75■□□□□ 0.43
SEC23A-201ENST00000307712 RGS3P49796 1198 aa17.74■□□□□ 0.43
SEC23A-201ENST00000307712 RCAN3Q9UKA8 241 aa17.73■□□□□ 0.43
SEC23A-201ENST00000307712 PAK3O75914 559 aaPredicted RBP17.73■□□□□ 0.43
SEC23A-201ENST00000307712 CC2D1BQ5T0F9 858 aaKnown RBP17.72■□□□□ 0.43
SEC23A-201ENST00000307712 ERICH3Q5RHP9 1530 aa17.71■□□□□ 0.43
SEC23A-201ENST00000307712 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.71■□□□□ 0.43
SEC23A-201ENST00000307712 TCERG1O14776 1098 aaKnown RBP17.71■□□□□ 0.43
SEC23A-201ENST00000307712 UPF2Q9HAU5 1272 aaKnown RBP17.7■□□□□ 0.42
SEC23A-201ENST00000307712 EIF4G1Q04637 1599 aaKnown RBP17.69■□□□□ 0.42
SEC23A-201ENST00000307712 DCAF11Q8TEB1 546 aa17.68■□□□□ 0.42
SEC23A-201ENST00000307712 PKD2Q13563 968 aa17.68■□□□□ 0.42
SEC23A-201ENST00000307712 UACAQ9BZF9 1416 aa17.66■□□□□ 0.42
SEC23A-201ENST00000307712 EXOC6Q8TAG9 804 aa17.66■□□□□ 0.42
SEC23A-201ENST00000307712 FGD6Q6ZV73 1430 aa17.66■□□□□ 0.42
SEC23A-201ENST00000307712 CCDC7Q96M83 1385 aa17.65■□□□□ 0.42
SEC23A-201ENST00000307712 TDRD9Q8NDG6 1382 aaKnown RBP17.64■□□□□ 0.42
SEC23A-201ENST00000307712 PDE4AP27815 886 aa17.64■□□□□ 0.41
SEC23A-201ENST00000307712 KIF7Q2M1P5 1343 aa17.63■□□□□ 0.41
SEC23A-201ENST00000307712 CNTLNQ9NXG0 1405 aa17.62■□□□□ 0.41
SEC23A-201ENST00000307712 SLC4A3P48751 1232 aa17.59■□□□□ 0.41
SEC23A-201ENST00000307712 TOP2BQ02880 1626 aa17.59■□□□□ 0.41
SEC23A-201ENST00000307712 PLIN1O60240 522 aa17.59■□□□□ 0.41
SEC23A-201ENST00000307712 BECN1Q14457 450 aa17.58■□□□□ 0.4
SEC23A-201ENST00000307712 KNSTRNQ9Y448 316 aa17.58■□□□□ 0.4
SEC23A-201ENST00000307712 CADPSQ9ULU8 1353 aa17.58■□□□□ 0.4
SEC23A-201ENST00000307712 RRP1P56182 461 aaKnown RBP17.57■□□□□ 0.4
SEC23A-201ENST00000307712 RALBP1Q15311 655 aa17.57■□□□□ 0.4
SEC23A-201ENST00000307712 AKNAQ7Z591 1439 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms