RNA–Protein interactions for RNA: ENST00000303545.3

RNF139-201, Transcript of ring finger protein 139, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF139, Length 2,637 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139-201ENST00000303545 PDS5BQ9NTI5 1447 aa27.64■■■□□ 2.02
RNF139-201ENST00000303545 DHX57Q6P158 1386 aaKnown RBP27.64■■■□□ 2.01
RNF139-201ENST00000303545 PCF11O94913 1555 aaKnown RBP27.62■■■□□ 2.01
RNF139-201ENST00000303545 CUL7Q14999 1698 aa27.59■■■□□ 2.01
RNF139-201ENST00000303545 WDR97A6NE52 1622 aa27.58■■■□□ 2.01
RNF139-201ENST00000303545 LRRC9Q6ZRR7 1453 aa27.58■■■□□ 2.01
RNF139-201ENST00000303545 FHAD1B1AJZ9 1412 aa27.57■■■□□ 2
RNF139-201ENST00000303545 PHLDB1Q86UU1 1377 aa27.55■■■□□ 2
RNF139-201ENST00000303545 GAPVD1Q14C86 1478 aa27.55■■■□□ 2
RNF139-201ENST00000303545 FAM50AQ14320 339 aaKnown RBP27.54■■■□□ 2
RNF139-201ENST00000303545 CTTNBP2Q8WZ74 1663 aa27.53■■■□□ 2
RNF139-201ENST00000303545 SCAF1Q9H7N4 1312 aaKnown RBP27.52■■■□□ 2
RNF139-201ENST00000303545 ABCA5Q8WWZ7 1642 aa27.5■■□□□ 1.99
RNF139-201ENST00000303545 MAP3K1Q13233 1512 aa27.49■■□□□ 1.99
RNF139-201ENST00000303545 CFAP43Q8NDM7 1665 aa27.45■■□□□ 1.98
RNF139-201ENST00000303545 EFCAB5A4FU69 1503 aa27.43■■□□□ 1.98
RNF139-201ENST00000303545 NEUROD1Q13562 356 aa27.42■■□□□ 1.98
RNF139-201ENST00000303545 RAB3GAP2Q9H2M9 1393 aa27.42■■□□□ 1.98
RNF139-201ENST00000303545 FYCO1Q9BQS8 1478 aa27.4■■□□□ 1.98
RNF139-201ENST00000303545 CASKIN1Q8WXD9 1431 aa27.39■■□□□ 1.98
RNF139-201ENST00000303545 CLSPNQ9HAW4 1339 aa27.38■■□□□ 1.97
RNF139-201ENST00000303545 TARBP1Q13395 1621 aaKnown RBP27.38■■□□□ 1.97
RNF139-201ENST00000303545 AQRO60306 1485 aaKnown RBP eCLIP27.37■■□□□ 1.975e-7■■■■□ 19.7
RNF139-201ENST00000303545 MIER1Q8N108 512 aa27.37■■□□□ 1.97
RNF139-201ENST00000303545 YTHDC1Q96MU7 727 aaKnown RBP27.35■■□□□ 1.97
RNF139-201ENST00000303545 ACIN1Q9UKV3 1341 aaKnown RBP27.35■■□□□ 1.97
RNF139-201ENST00000303545 FMN1Q68DA7 1419 aa27.32■■□□□ 1.96
RNF139-201ENST00000303545 SNAPC4Q5SXM2 1469 aa27.3■■□□□ 1.96
RNF139-201ENST00000303545 SETD5Q9C0A6 1442 aa27.29■■□□□ 1.96
RNF139-201ENST00000303545 SAMD9Q5K651 1589 aa27.26■■□□□ 1.95
RNF139-201ENST00000303545 MTUS2Q5JR59 1369 aa27.26■■□□□ 1.95
RNF139-201ENST00000303545 PBRM1Q86U86 1689 aa27.25■■□□□ 1.95
RNF139-201ENST00000303545 LRRIQ1Q96JM4 1722 aa27.25■■□□□ 1.95
RNF139-201ENST00000303545 MRC2Q9UBG0 1479 aa27.24■■□□□ 1.95
RNF139-201ENST00000303545 ARID3CA6NKF2 412 aa27.22■■□□□ 1.95
RNF139-201ENST00000303545 CENPBP07199 599 aaPredicted RBP27.22■■□□□ 1.95
RNF139-201ENST00000303545 MAPKBP1O60336 1514 aa27.2■■□□□ 1.95
RNF139-201ENST00000303545 SIN3AQ96ST3 1273 aa27.19■■□□□ 1.94
RNF139-201ENST00000303545 ZNF608Q9ULD9 1512 aaPredicted RBP27.18■■□□□ 1.94
RNF139-201ENST00000303545 GRIN2BQ13224 1484 aa27.15■■□□□ 1.94
RNF139-201ENST00000303545 FGD6Q6ZV73 1430 aa27.14■■□□□ 1.94
RNF139-201ENST00000303545 ADAMTS12P58397 1594 aa27.11■■□□□ 1.93
RNF139-201ENST00000303545 GTF3C3Q9Y5Q9 886 aa27.09■■□□□ 1.93
RNF139-201ENST00000303545 NCOA2Q15596 1464 aa27.08■■□□□ 1.93
RNF139-201ENST00000303545 IQGAP2Q13576 1575 aa27.07■■□□□ 1.92
RNF139-201ENST00000303545 PTPRKQ15262 1439 aa27.05■■□□□ 1.92
RNF139-201ENST00000303545 MAGI3Q5TCQ9 1506 aa27.04■■□□□ 1.92
RNF139-201ENST00000303545 IFT140Q96RY7 1462 aa27.01■■□□□ 1.91
RNF139-201ENST00000303545 ERCC6Q03468 1493 aa27.01■■□□□ 1.91
RNF139-201ENST00000303545 MYOM3Q5VTT5 1437 aa27■■□□□ 1.91
RNF139-201ENST00000303545 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.99■■□□□ 1.91
RNF139-201ENST00000303545 SUPT6HQ7KZ85 1726 aaKnown RBP26.99■■□□□ 1.91
RNF139-201ENST00000303545 WDR62O43379 1518 aa26.99■■□□□ 1.91
RNF139-201ENST00000303545 CDK13Q14004 1512 aaKnown RBP26.98■■□□□ 1.91
RNF139-201ENST00000303545 CHIC2Q9UKJ5 165 aa26.97■■□□□ 1.91
RNF139-201ENST00000303545 EHBP1L1Q8N3D4 1523 aa26.96■■□□□ 1.91
RNF139-201ENST00000303545 THOC2Q8NI27 1593 aaKnown RBP26.95■■□□□ 1.9
RNF139-201ENST00000303545 FBLN2P98095 1184 aa26.93■■□□□ 1.9
RNF139-201ENST00000303545 HECW1Q76N89 1606 aa26.92■■□□□ 1.9
RNF139-201ENST00000303545 CCDC18Q5T9S5 1454 aa26.92■■□□□ 1.9
RNF139-201ENST00000303545 EPRSP07814 1512 aaKnown RBP26.92■■□□□ 1.9
RNF139-201ENST00000303545 RRP7BPQ9NSQ0 103 aa26.91■■□□□ 1.9
RNF139-201ENST00000303545 EIF4G3O43432 1585 aaKnown RBP26.91■■□□□ 1.9
RNF139-201ENST00000303545 UGGT2Q9NYU1 1516 aa26.9■■□□□ 1.9
RNF139-201ENST00000303545 PELP1Q8IZL8 1130 aaKnown RBP26.9■■□□□ 1.9
RNF139-201ENST00000303545 PTPN23Q9H3S7 1636 aa26.89■■□□□ 1.9
RNF139-201ENST00000303545 HIRIP3Q9BW71 556 aaPredicted RBP26.88■■□□□ 1.89
RNF139-201ENST00000303545 HFM1A2PYH4 1435 aa26.85■■□□□ 1.89
RNF139-201ENST00000303545 NAIPQ13075 1403 aa26.84■■□□□ 1.89
RNF139-201ENST00000303545 CHMP7Q8WUX9 453 aaPredicted RBP26.83■■□□□ 1.89
RNF139-201ENST00000303545 GRIN2AQ12879 1464 aa26.83■■□□□ 1.89
RNF139-201ENST00000303545 ARHGEF11O15085 1522 aa26.82■■□□□ 1.88
RNF139-201ENST00000303545 DISP1Q96F81 1524 aa26.81■■□□□ 1.88
RNF139-201ENST00000303545 KIAA0586Q9BVV6 1533 aa26.81■■□□□ 1.88
RNF139-201ENST00000303545 KIAA0556O60303 1618 aa26.78■■□□□ 1.88
RNF139-201ENST00000303545 UACAQ9BZF9 1416 aa26.76■■□□□ 1.87
RNF139-201ENST00000303545 PPP1R15AO75807 674 aaPredicted RBP26.76■■□□□ 1.87
RNF139-201ENST00000303545 TRIM52Q96A61 297 aa26.74■■□□□ 1.87
RNF139-201ENST00000303545 DDX10Q13206 875 aaKnown RBP26.73■■□□□ 1.87
RNF139-201ENST00000303545 TONSLQ96HA7 1378 aa26.72■■□□□ 1.87
RNF139-201ENST00000303545 NUP153P49790 1475 aaKnown RBP26.7■■□□□ 1.87
RNF139-201ENST00000303545 ZNF644Q9H582 1327 aaPredicted RBP26.7■■□□□ 1.87
RNF139-201ENST00000303545 KCNH8Q96L42 1107 aa26.69■■□□□ 1.86
RNF139-201ENST00000303545 CEP170Q5SW79 1584 aa26.69■■□□□ 1.86
RNF139-201ENST00000303545 TCOF1Q13428 1488 aaKnown RBP26.69■■□□□ 1.86
RNF139-201ENST00000303545 KDM6BO15054 1643 aa26.68■■□□□ 1.86
RNF139-201ENST00000303545 TIMELESSQ9UNS1 1208 aa26.67■■□□□ 1.86
RNF139-201ENST00000303545 RAPGEF6Q8TEU7 1601 aa26.66■■□□□ 1.86
RNF139-201ENST00000303545 MAGI1Q96QZ7 1491 aaPredicted RBP26.65■■□□□ 1.86
RNF139-201ENST00000303545 SYNJ2O15056 1496 aa26.64■■□□□ 1.86
RNF139-201ENST00000303545 PLB1Q6P1J6 1458 aa26.63■■□□□ 1.85
RNF139-201ENST00000303545 FOXD1Q16676 465 aa26.63■■□□□ 1.85
RNF139-201ENST00000303545 MIA2Q96PC5 1412 aa26.61■■□□□ 1.85
RNF139-201ENST00000303545 PRG4Q92954 1404 aaPredicted RBP26.61■■□□□ 1.85
RNF139-201ENST00000303545 JPH4Q96JJ6 628 aa26.6■■□□□ 1.85
RNF139-201ENST00000303545 CDK11AQ9UQ88 783 aaPredicted RBP26.57■■□□□ 1.84
RNF139-201ENST00000303545 GCC2Q8IWJ2 1684 aa26.57■■□□□ 1.84
RNF139-201ENST00000303545 ZNF777Q9ULD5 760 aaPredicted RBP26.56■■□□□ 1.84
RNF139-201ENST00000303545 DENND4BO75064 1496 aaPredicted RBP26.55■■□□□ 1.84
RNF139-201ENST00000303545 MPHOSPH9Q99550 1183 aa26.53■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms