RNA–Protein interactions for RNA: ENST00000302946.12

SLFNL1-201, Transcript of schlafen like 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SLFNL1, Length 1,951 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLFNL1-201ENST00000302946 ZEB1P37275 1124 aaPredicted RBP25.42■■□□□ 1.66
SLFNL1-201ENST00000302946 CTTNBP2Q8WZ74 1663 aa25.42■■□□□ 1.66
SLFNL1-201ENST00000302946 SYNJ2O15056 1496 aa25.4■■□□□ 1.66
SLFNL1-201ENST00000302946 GRIN2AQ12879 1464 aa25.36■■□□□ 1.65
SLFNL1-201ENST00000302946 VPS8Q8N3P4 1428 aa25.35■■□□□ 1.65
SLFNL1-201ENST00000302946 RANGAP1P46060 587 aaPredicted RBP25.32■■□□□ 1.64
SLFNL1-201ENST00000302946 CHMP7Q8WUX9 453 aaPredicted RBP25.31■■□□□ 1.64
SLFNL1-201ENST00000302946 ARHGAP35Q9NRY4 1499 aa25.3■■□□□ 1.64
SLFNL1-201ENST00000302946 EFCAB5A4FU69 1503 aa25.3■■□□□ 1.64
SLFNL1-201ENST00000302946 ARAP1Q96P48 1450 aa25.27■■□□□ 1.64
SLFNL1-201ENST00000302946 TTBK1Q5TCY1 1321 aaPredicted RBP25.26■■□□□ 1.63
SLFNL1-201ENST00000302946 IQGAP2Q13576 1575 aa25.25■■□□□ 1.63
SLFNL1-201ENST00000302946 KIAA0586Q9BVV6 1533 aa25.23■■□□□ 1.63
SLFNL1-201ENST00000302946 FBLN2P98095 1184 aa25.2■■□□□ 1.62
SLFNL1-201ENST00000302946 NUP160Q12769 1436 aa25.2■■□□□ 1.62
SLFNL1-201ENST00000302946 SAMD9Q5K651 1589 aa25.17■■□□□ 1.62
SLFNL1-201ENST00000302946 CEP170Q5SW79 1584 aa25.16■■□□□ 1.62
SLFNL1-201ENST00000302946 UGGT2Q9NYU1 1516 aa25.14■■□□□ 1.62
SLFNL1-201ENST00000302946 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.1■■□□□ 1.61
SLFNL1-201ENST00000302946 CHD1O14646 1710 aa25.09■■□□□ 1.61
SLFNL1-201ENST00000302946 FHOD3Q2V2M9 1422 aa25.08■■□□□ 1.61
SLFNL1-201ENST00000302946 FMN1Q68DA7 1419 aa25.06■■□□□ 1.6
SLFNL1-201ENST00000302946 APLP2Q06481 763 aa25.06■■□□□ 1.6
SLFNL1-201ENST00000302946 P3H3Q8IVL6 736 aa25.04■■□□□ 1.6
SLFNL1-201ENST00000302946 CCER1Q8TC90 406 aaPredicted RBP25.02■■□□□ 1.6
SLFNL1-201ENST00000302946 KIAA0556O60303 1618 aa24.98■■□□□ 1.59
SLFNL1-201ENST00000302946 DISP1Q96F81 1524 aa24.96■■□□□ 1.59
SLFNL1-201ENST00000302946 FYCO1Q9BQS8 1478 aa24.96■■□□□ 1.59
SLFNL1-201ENST00000302946 CARMIL2Q6F5E8 1435 aa24.96■■□□□ 1.59
SLFNL1-201ENST00000302946 CASKIN1Q8WXD9 1431 aa24.96■■□□□ 1.59
SLFNL1-201ENST00000302946 JPH4Q96JJ6 628 aa24.95■■□□□ 1.58
SLFNL1-201ENST00000302946 PCF11O94913 1555 aaKnown RBP24.94■■□□□ 1.58
SLFNL1-201ENST00000302946 MAP3K1Q13233 1512 aa24.94■■□□□ 1.58
SLFNL1-201ENST00000302946 CLASP1Q7Z460 1538 aa24.86■■□□□ 1.57
SLFNL1-201ENST00000302946 SHROOM2Q13796 1616 aa24.86■■□□□ 1.57
SLFNL1-201ENST00000302946 TIAM1Q13009 1591 aa24.84■■□□□ 1.57
SLFNL1-201ENST00000302946 PRG4Q92954 1404 aaPredicted RBP24.81■■□□□ 1.56
SLFNL1-201ENST00000302946 CFAP43Q8NDM7 1665 aa24.81■■□□□ 1.56
SLFNL1-201ENST00000302946 HECW1Q76N89 1606 aa24.8■■□□□ 1.56
SLFNL1-201ENST00000302946 KANK4Q5T7N3 995 aaPredicted RBP24.8■■□□□ 1.56
SLFNL1-201ENST00000302946 HNRNPUL2Q1KMD3 747 aaKnown RBP24.78■■□□□ 1.56
SLFNL1-201ENST00000302946 ATP1B4Q9UN42 357 aaPredicted RBP24.78■■□□□ 1.56
SLFNL1-201ENST00000302946 CCDC18Q5T9S5 1454 aa24.77■■□□□ 1.56
SLFNL1-201ENST00000302946 LRRC9Q6ZRR7 1453 aa24.73■■□□□ 1.55
SLFNL1-201ENST00000302946 RAPGEF6Q8TEU7 1601 aa24.72■■□□□ 1.55
SLFNL1-201ENST00000302946 RRBP1Q9P2E9 1410 aaKnown RBP24.72■■□□□ 1.55
SLFNL1-201ENST00000302946 OSCARQ8IYS5 282 aa24.69■■□□□ 1.54
SLFNL1-201ENST00000302946 EPRSP07814 1512 aaKnown RBP24.67■■□□□ 1.54
SLFNL1-201ENST00000302946 PTPRGP23470 1445 aa24.67■■□□□ 1.54
SLFNL1-201ENST00000302946 LRRIQ1Q96JM4 1722 aa24.65■■□□□ 1.54
SLFNL1-201ENST00000302946 NUP153P49790 1475 aaKnown RBP24.63■■□□□ 1.53
SLFNL1-201ENST00000302946 ABCA8O94911 1581 aa24.63■■□□□ 1.53
SLFNL1-201ENST00000302946 PLB1Q6P1J6 1458 aa24.62■■□□□ 1.53
SLFNL1-201ENST00000302946 MTUS2Q5JR59 1369 aa24.61■■□□□ 1.53
SLFNL1-201ENST00000302946 EHBP1L1Q8N3D4 1523 aa24.61■■□□□ 1.53
SLFNL1-201ENST00000302946 ERCC6L2Q5T890 1561 aa24.58■■□□□ 1.53
SLFNL1-201ENST00000302946 CDK13Q14004 1512 aaKnown RBP24.56■■□□□ 1.52
SLFNL1-201ENST00000302946 CCNB3Q8WWL7 1395 aa24.56■■□□□ 1.52
SLFNL1-201ENST00000302946 CDK11AQ9UQ88 783 aaPredicted RBP24.54■■□□□ 1.52
SLFNL1-201ENST00000302946 UACAQ9BZF9 1416 aa24.54■■□□□ 1.52
SLFNL1-201ENST00000302946 SUPT6HQ7KZ85 1726 aaKnown RBP24.5■■□□□ 1.51
SLFNL1-201ENST00000302946 MAGI3Q5TCQ9 1506 aa24.48■■□□□ 1.51
SLFNL1-201ENST00000302946 ABCC2Q92887 1545 aa24.48■■□□□ 1.51
SLFNL1-201ENST00000302946 UHRF1BP1LA0JNW5 1464 aa24.45■■□□□ 1.51
SLFNL1-201ENST00000302946 ARID3CA6NKF2 412 aa24.45■■□□□ 1.5
SLFNL1-201ENST00000302946 PHLDB1Q86UU1 1377 aa24.45■■□□□ 1.5
SLFNL1-201ENST00000302946 NCOA2Q15596 1464 aa24.45■■□□□ 1.5
SLFNL1-201ENST00000302946 ATP10BO94823 1461 aa24.44■■□□□ 1.5
SLFNL1-201ENST00000302946 DHX57Q6P158 1386 aaKnown RBP24.44■■□□□ 1.5
SLFNL1-201ENST00000302946 ARHGEF11O15085 1522 aa24.42■■□□□ 1.5
SLFNL1-201ENST00000302946 TROQ12816 1431 aaPredicted RBP24.42■■□□□ 1.5
SLFNL1-201ENST00000302946 CLSPNQ9HAW4 1339 aa24.39■■□□□ 1.49
SLFNL1-201ENST00000302946 PLEKHD1A6NEE1 506 aa24.36■■□□□ 1.49
SLFNL1-201ENST00000302946 MYOM3Q5VTT5 1437 aa24.36■■□□□ 1.49
SLFNL1-201ENST00000302946 ADCY10Q96PN6 1610 aa24.34■■□□□ 1.49
SLFNL1-201ENST00000302946 FGD6Q6ZV73 1430 aa24.34■■□□□ 1.49
SLFNL1-201ENST00000302946 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.34■■□□□ 1.49
SLFNL1-201ENST00000302946 KDM5BQ9UGL1 1544 aa24.32■■□□□ 1.48
SLFNL1-201ENST00000302946 ZNF316A6NFI3 1004 aaPredicted RBP24.29■■□□□ 1.48
SLFNL1-201ENST00000302946 KIF14Q15058 1648 aa24.29■■□□□ 1.48
SLFNL1-201ENST00000302946 DIEXFQ68CQ4 756 aaKnown RBP24.29■■□□□ 1.48
SLFNL1-201ENST00000302946 MIA2Q96PC5 1412 aa24.28■■□□□ 1.48
SLFNL1-201ENST00000302946 ZCCHC11Q5TAX3 1644 aaKnown RBP24.26■■□□□ 1.47
SLFNL1-201ENST00000302946 ITGAEP38570 1179 aa24.25■■□□□ 1.47
SLFNL1-201ENST00000302946 FAM50AQ14320 339 aaKnown RBP24.23■■□□□ 1.47
SLFNL1-201ENST00000302946 RAB3GAP2Q9H2M9 1393 aa24.23■■□□□ 1.47
SLFNL1-201ENST00000302946 ITSN2Q9NZM3 1697 aa24.22■■□□□ 1.47
SLFNL1-201ENST00000302946 TCOF1Q13428 1488 aaKnown RBP24.21■■□□□ 1.47
SLFNL1-201ENST00000302946 PTPN23Q9H3S7 1636 aa24.21■■□□□ 1.47
SLFNL1-201ENST00000302946 ABCC10Q5T3U5 1492 aa24.19■■□□□ 1.46
SLFNL1-201ENST00000302946 SETD5Q9C0A6 1442 aa24.18■■□□□ 1.46
SLFNL1-201ENST00000302946 GPATCH8Q9UKJ3 1502 aaKnown RBP24.15■■□□□ 1.46
SLFNL1-201ENST00000302946 MAPKBP1O60336 1514 aa24.15■■□□□ 1.46
SLFNL1-201ENST00000302946 RIMBP3CA6NJZ7 1639 aa24.14■■□□□ 1.45
SLFNL1-201ENST00000302946 RIMBP3BA6NNM3 1639 aa24.14■■□□□ 1.45
SLFNL1-201ENST00000302946 RIMBP3Q9UFD9 1639 aa24.14■■□□□ 1.45
SLFNL1-201ENST00000302946 NPM1P06748 294 aaKnown RBP eCLIP24.13■■□□□ 1.45
SLFNL1-201ENST00000302946 CFDP1Q9UEE9 299 aaPredicted RBP24.11■■□□□ 1.45
SLFNL1-201ENST00000302946 WDR7Q9Y4E6 1490 aa24.1■■□□□ 1.45
SLFNL1-201ENST00000302946 CDC42BPAQ5VT25 1732 aa24.08■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms