RNA–Protein interactions for RNA: ENST00000301071.11

TUBA1A-202, Transcript of tubulin alpha 1a, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBA1A, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1A-202ENST00000301071 ADAMTS12P58397 1594 aa13.88□□□□□ -0.19
TUBA1A-202ENST00000301071 CARMIL1Q5VZK9 1371 aa13.87□□□□□ -0.19
TUBA1A-202ENST00000301071 MAGI1Q96QZ7 1491 aaPredicted RBP13.86□□□□□ -0.19
TUBA1A-202ENST00000301071 RAPGEF2Q9Y4G8 1499 aa13.84□□□□□ -0.19
TUBA1A-202ENST00000301071 FHAD1B1AJZ9 1412 aa13.84□□□□□ -0.19
TUBA1A-202ENST00000301071 EHMT2Q96KQ7 1210 aa13.84□□□□□ -0.19
TUBA1A-202ENST00000301071 GOLGA3Q08378 1498 aa13.82□□□□□ -0.2
TUBA1A-202ENST00000301071 SYNJ2O15056 1496 aa13.8□□□□□ -0.2
TUBA1A-202ENST00000301071 CHD1O14646 1710 aa13.8□□□□□ -0.2
TUBA1A-202ENST00000301071 DIEXFQ68CQ4 756 aaKnown RBP13.8□□□□□ -0.2
TUBA1A-202ENST00000301071 GRIN2AQ12879 1464 aa13.77□□□□□ -0.21
TUBA1A-202ENST00000301071 CHMP7Q8WUX9 453 aaPredicted RBP13.76□□□□□ -0.21
TUBA1A-202ENST00000301071 FBLN2P98095 1184 aa13.75□□□□□ -0.21
TUBA1A-202ENST00000301071 CTTNBP2Q8WZ74 1663 aa13.74□□□□□ -0.21
TUBA1A-202ENST00000301071 UBTFP17480 764 aaKnown RBP13.74□□□□□ -0.21
TUBA1A-202ENST00000301071 CCER1Q8TC90 406 aaPredicted RBP13.72□□□□□ -0.21
TUBA1A-202ENST00000301071 CEP170Q5SW79 1584 aa13.71□□□□□ -0.21
TUBA1A-202ENST00000301071 TNIKQ9UKE5 1360 aa13.71□□□□□ -0.21
TUBA1A-202ENST00000301071 NUP160Q12769 1436 aa13.69□□□□□ -0.22
TUBA1A-202ENST00000301071 IQGAP2Q13576 1575 aa13.65□□□□□ -0.22
TUBA1A-202ENST00000301071 CLSPNQ9HAW4 1339 aa13.65□□□□□ -0.23
TUBA1A-202ENST00000301071 KIAA0586Q9BVV6 1533 aa13.64□□□□□ -0.23
TUBA1A-202ENST00000301071 CEP162Q5TB80 1403 aa13.61□□□□□ -0.23
TUBA1A-202ENST00000301071 CLASP1Q7Z460 1538 aa13.61□□□□□ -0.23
TUBA1A-202ENST00000301071 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.6□□□□□ -0.23
TUBA1A-202ENST00000301071 RANGAP1P46060 587 aaPredicted RBP13.6□□□□□ -0.23
TUBA1A-202ENST00000301071 ZNF316A6NFI3 1004 aaPredicted RBP13.58□□□□□ -0.23
TUBA1A-202ENST00000301071 ERICH6Q7L0X2 663 aa13.58□□□□□ -0.23
TUBA1A-202ENST00000301071 CLIP1P30622 1438 aa13.58□□□□□ -0.24
TUBA1A-202ENST00000301071 UGGT2Q9NYU1 1516 aa13.57□□□□□ -0.24
TUBA1A-202ENST00000301071 OSCARQ8IYS5 282 aa13.57□□□□□ -0.24
TUBA1A-202ENST00000301071 SHROOM2Q13796 1616 aa13.56□□□□□ -0.24
TUBA1A-202ENST00000301071 SAMD9Q5K651 1589 aa13.56□□□□□ -0.24
TUBA1A-202ENST00000301071 ARHGAP35Q9NRY4 1499 aa13.55□□□□□ -0.24
TUBA1A-202ENST00000301071 JPH4Q96JJ6 628 aa13.55□□□□□ -0.24
TUBA1A-202ENST00000301071 EFCAB5A4FU69 1503 aa13.54□□□□□ -0.24
TUBA1A-202ENST00000301071 DISP1Q96F81 1524 aa13.52□□□□□ -0.24
TUBA1A-202ENST00000301071 KIAA0556O60303 1618 aa13.52□□□□□ -0.25
TUBA1A-202ENST00000301071 APLP2Q06481 763 aa13.51□□□□□ -0.25
TUBA1A-202ENST00000301071 ARAP1Q96P48 1450 aa13.51□□□□□ -0.25
TUBA1A-202ENST00000301071 PRKCSHP14314 528 aaPredicted RBP13.51□□□□□ -0.25
TUBA1A-202ENST00000301071 P3H3Q8IVL6 736 aa13.5□□□□□ -0.25
TUBA1A-202ENST00000301071 PRG4Q92954 1404 aaPredicted RBP13.49□□□□□ -0.25
TUBA1A-202ENST00000301071 ERCC6L2Q5T890 1561 aa13.49□□□□□ -0.25
TUBA1A-202ENST00000301071 FHOD3Q2V2M9 1422 aa13.49□□□□□ -0.25
TUBA1A-202ENST00000301071 CARMIL2Q6F5E8 1435 aa13.46□□□□□ -0.25
TUBA1A-202ENST00000301071 VPS8Q8N3P4 1428 aa13.42□□□□□ -0.26
TUBA1A-202ENST00000301071 FMN1Q68DA7 1419 aa13.39□□□□□ -0.27
TUBA1A-202ENST00000301071 PCF11O94913 1555 aaKnown RBP13.39□□□□□ -0.27
TUBA1A-202ENST00000301071 ARHGEF11O15085 1522 aa13.38□□□□□ -0.27
TUBA1A-202ENST00000301071 YTHDC1Q96MU7 727 aaKnown RBP13.38□□□□□ -0.27
TUBA1A-202ENST00000301071 ANP32EQ9BTT0 268 aa13.37□□□□□ -0.27
TUBA1A-202ENST00000301071 DAXXQ9UER7 740 aaPredicted RBP13.37□□□□□ -0.27
TUBA1A-202ENST00000301071 PTPRGP23470 1445 aa13.37□□□□□ -0.27
TUBA1A-202ENST00000301071 RIMBP3CA6NJZ7 1639 aa13.37□□□□□ -0.27
TUBA1A-202ENST00000301071 RIMBP3BA6NNM3 1639 aa13.37□□□□□ -0.27
TUBA1A-202ENST00000301071 RIMBP3Q9UFD9 1639 aa13.37□□□□□ -0.27
TUBA1A-202ENST00000301071 LRRIQ1Q96JM4 1722 aa13.36□□□□□ -0.27
TUBA1A-202ENST00000301071 RAPGEF6Q8TEU7 1601 aa13.35□□□□□ -0.27
TUBA1A-202ENST00000301071 CASKIN1Q8WXD9 1431 aa13.35□□□□□ -0.27
TUBA1A-202ENST00000301071 PLB1Q6P1J6 1458 aa13.35□□□□□ -0.27
TUBA1A-202ENST00000301071 ABCA8O94911 1581 aa13.35□□□□□ -0.27
TUBA1A-202ENST00000301071 FYCO1Q9BQS8 1478 aa13.33□□□□□ -0.27
TUBA1A-202ENST00000301071 MIER1Q8N108 512 aa13.33□□□□□ -0.28
TUBA1A-202ENST00000301071 HECW1Q76N89 1606 aa13.31□□□□□ -0.28
TUBA1A-202ENST00000301071 ATP1B4Q9UN42 357 aaPredicted RBP13.3□□□□□ -0.28
TUBA1A-202ENST00000301071 UACAQ9BZF9 1416 aa13.3□□□□□ -0.28
TUBA1A-202ENST00000301071 NUP153P49790 1475 aaKnown RBP13.29□□□□□ -0.28
TUBA1A-202ENST00000301071 BCL11AQ9H165 835 aa13.29□□□□□ -0.28
TUBA1A-202ENST00000301071 CFAP43Q8NDM7 1665 aa13.28□□□□□ -0.28
TUBA1A-202ENST00000301071 ABCC2Q92887 1545 aa13.28□□□□□ -0.28
TUBA1A-202ENST00000301071 ADCY10Q96PN6 1610 aa13.27□□□□□ -0.28
TUBA1A-202ENST00000301071 EPRSP07814 1512 aaKnown RBP13.26□□□□□ -0.29
TUBA1A-202ENST00000301071 UHRF1BP1LA0JNW5 1464 aa13.26□□□□□ -0.29
TUBA1A-202ENST00000301071 TIAM1Q13009 1591 aa13.26□□□□□ -0.29
TUBA1A-202ENST00000301071 CDK13Q14004 1512 aaKnown RBP13.26□□□□□ -0.29
TUBA1A-202ENST00000301071 ARID3CA6NKF2 412 aa13.25□□□□□ -0.29
TUBA1A-202ENST00000301071 SUPT16HQ9Y5B9 1047 aaKnown RBP13.25□□□□□ -0.29
TUBA1A-202ENST00000301071 MAP3K1Q13233 1512 aa13.25□□□□□ -0.29
TUBA1A-202ENST00000301071 CCDC18Q5T9S5 1454 aa13.24□□□□□ -0.29
TUBA1A-202ENST00000301071 CYB5RLQ6IPT4 315 aa13.23□□□□□ -0.29
TUBA1A-202ENST00000301071 ATP10BO94823 1461 aa13.23□□□□□ -0.29
TUBA1A-202ENST00000301071 ZCCHC11Q5TAX3 1644 aaKnown RBP13.22□□□□□ -0.29
TUBA1A-202ENST00000301071 KDM5BQ9UGL1 1544 aa13.21□□□□□ -0.3
TUBA1A-202ENST00000301071 KANK4Q5T7N3 995 aaPredicted RBP13.2□□□□□ -0.3
TUBA1A-202ENST00000301071 TSHZ2Q9NRE2 1034 aa13.2□□□□□ -0.3
TUBA1A-202ENST00000301071 MAGI3Q5TCQ9 1506 aa13.2□□□□□ -0.3
TUBA1A-202ENST00000301071 LRRC9Q6ZRR7 1453 aa13.19□□□□□ -0.3
TUBA1A-202ENST00000301071 HNRNPUL2Q1KMD3 747 aaKnown RBP13.18□□□□□ -0.3
TUBA1A-202ENST00000301071 EHBP1L1Q8N3D4 1523 aa13.15□□□□□ -0.3
TUBA1A-202ENST00000301071 MTUS2Q5JR59 1369 aa13.14□□□□□ -0.31
TUBA1A-202ENST00000301071 AEBP2Q6ZN18 517 aaPredicted RBP13.13□□□□□ -0.31
TUBA1A-202ENST00000301071 CDK11AQ9UQ88 783 aaPredicted RBP13.13□□□□□ -0.31
TUBA1A-202ENST00000301071 TROQ12816 1431 aaPredicted RBP13.13□□□□□ -0.31
TUBA1A-202ENST00000301071 SUPT6HQ7KZ85 1726 aaKnown RBP13.12□□□□□ -0.31
TUBA1A-202ENST00000301071 PLEKHD1A6NEE1 506 aa13.12□□□□□ -0.31
TUBA1A-202ENST00000301071 NPM1P06748 294 aaKnown RBP eCLIP13.11□□□□□ -0.31
TUBA1A-202ENST00000301071 KIF14Q15058 1648 aa13.11□□□□□ -0.31
TUBA1A-202ENST00000301071 ASXL2Q76L83 1435 aa13.1□□□□□ -0.31
TUBA1A-202ENST00000301071 WDR7Q9Y4E6 1490 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms