RNA–Protein interactions for RNA: ENST00000299540.6

AMD1P4-201, Transcript of adenosylmethionine decarboxylase 1 pseudogene 4, humanhuman

BASIC

Gene AMD1P4, Length 1,345 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMD1P4-201ENST00000299540 CLASP1Q7Z460 1538 aa20.64■□□□□ 0.89
AMD1P4-201ENST00000299540 KIAA0586Q9BVV6 1533 aa20.56■□□□□ 0.88
AMD1P4-201ENST00000299540 GOLGA3Q08378 1498 aa20.51■□□□□ 0.87
AMD1P4-201ENST00000299540 SHROOM2Q13796 1616 aa20.5■□□□□ 0.87
AMD1P4-201ENST00000299540 DNAJC5Q9H3Z4 198 aa20.49■□□□□ 0.87
AMD1P4-201ENST00000299540 CTTNBP2Q8WZ74 1663 aa20.47■□□□□ 0.87
AMD1P4-201ENST00000299540 JPH4Q96JJ6 628 aa20.46■□□□□ 0.87
AMD1P4-201ENST00000299540 IQGAP2Q13576 1575 aa20.45■□□□□ 0.86
AMD1P4-201ENST00000299540 UGGT2Q9NYU1 1516 aa20.41■□□□□ 0.86
AMD1P4-201ENST00000299540 ERCC6L2Q5T890 1561 aa20.39■□□□□ 0.85
AMD1P4-201ENST00000299540 LOC105371045A0A1W2PR82 267 aa20.38■□□□□ 0.85
AMD1P4-201ENST00000299540 EHMT2Q96KQ7 1210 aa20.38■□□□□ 0.85
AMD1P4-201ENST00000299540 TNIKQ9UKE5 1360 aa20.37■□□□□ 0.85
AMD1P4-201ENST00000299540 ARHGEF11O15085 1522 aa20.36■□□□□ 0.85
AMD1P4-201ENST00000299540 DISP1Q96F81 1524 aa20.36■□□□□ 0.85
AMD1P4-201ENST00000299540 PRG4Q92954 1404 aaPredicted RBP20.36■□□□□ 0.85
AMD1P4-201ENST00000299540 UBTFP17480 764 aaKnown RBP20.36■□□□□ 0.85
AMD1P4-201ENST00000299540 RIMBP3CA6NJZ7 1639 aa20.33■□□□□ 0.85
AMD1P4-201ENST00000299540 RIMBP3BA6NNM3 1639 aa20.33■□□□□ 0.85
AMD1P4-201ENST00000299540 RIMBP3Q9UFD9 1639 aa20.33■□□□□ 0.85
AMD1P4-201ENST00000299540 SAMD9Q5K651 1589 aa20.28■□□□□ 0.84
AMD1P4-201ENST00000299540 KIAA0556O60303 1618 aa20.27■□□□□ 0.84
AMD1P4-201ENST00000299540 ARAP1Q96P48 1450 aa20.25■□□□□ 0.83
AMD1P4-201ENST00000299540 CARMIL2Q6F5E8 1435 aa20.24■□□□□ 0.83
AMD1P4-201ENST00000299540 ARHGAP35Q9NRY4 1499 aa20.23■□□□□ 0.83
AMD1P4-201ENST00000299540 EFCAB5A4FU69 1503 aa20.21■□□□□ 0.83
AMD1P4-201ENST00000299540 PTPRGP23470 1445 aa20.16■□□□□ 0.82
AMD1P4-201ENST00000299540 CLIP1P30622 1438 aa20.16■□□□□ 0.82
AMD1P4-201ENST00000299540 CEP162Q5TB80 1403 aa20.16■□□□□ 0.82
AMD1P4-201ENST00000299540 RANGAP1P46060 587 aaPredicted RBP20.15■□□□□ 0.82
AMD1P4-201ENST00000299540 P3H3Q8IVL6 736 aa20.15■□□□□ 0.82
AMD1P4-201ENST00000299540 FHOD3Q2V2M9 1422 aa20.15■□□□□ 0.82
AMD1P4-201ENST00000299540 CYB5RLQ6IPT4 315 aa20.11■□□□□ 0.81
AMD1P4-201ENST00000299540 FOXD1Q16676 465 aa20.08■□□□□ 0.81
AMD1P4-201ENST00000299540 ABCA8O94911 1581 aa20.07■□□□□ 0.8
AMD1P4-201ENST00000299540 UACAQ9BZF9 1416 aa20.06■□□□□ 0.8
AMD1P4-201ENST00000299540 UHRF1BP1LA0JNW5 1464 aa20.05■□□□□ 0.8
AMD1P4-201ENST00000299540 PLB1Q6P1J6 1458 aa20.05■□□□□ 0.8
AMD1P4-201ENST00000299540 ADCY10Q96PN6 1610 aa20.03■□□□□ 0.8
AMD1P4-201ENST00000299540 TTBK1Q5TCY1 1321 aaPredicted RBP20.02■□□□□ 0.8
AMD1P4-201ENST00000299540 ABCC2Q92887 1545 aa20.02■□□□□ 0.79
AMD1P4-201ENST00000299540 FMN1Q68DA7 1419 aa20■□□□□ 0.79
AMD1P4-201ENST00000299540 RAPGEF6Q8TEU7 1601 aa19.97■□□□□ 0.79
AMD1P4-201ENST00000299540 KDM5BQ9UGL1 1544 aa19.96■□□□□ 0.79
AMD1P4-201ENST00000299540 NUP153P49790 1475 aaKnown RBP19.95■□□□□ 0.78
AMD1P4-201ENST00000299540 CASKIN1Q8WXD9 1431 aa19.93■□□□□ 0.78
AMD1P4-201ENST00000299540 ATP10BO94823 1461 aa19.91■□□□□ 0.78
AMD1P4-201ENST00000299540 VPS8Q8N3P4 1428 aa19.91■□□□□ 0.78
AMD1P4-201ENST00000299540 PCF11O94913 1555 aaKnown RBP19.9■□□□□ 0.78
AMD1P4-201ENST00000299540 FYCO1Q9BQS8 1478 aa19.88■□□□□ 0.77
AMD1P4-201ENST00000299540 LRRIQ1Q96JM4 1722 aa19.87■□□□□ 0.77
AMD1P4-201ENST00000299540 ZCCHC11Q5TAX3 1644 aaKnown RBP19.86■□□□□ 0.77
AMD1P4-201ENST00000299540 HECW1Q76N89 1606 aa19.86■□□□□ 0.77
AMD1P4-201ENST00000299540 EPRSP07814 1512 aaKnown RBP19.85■□□□□ 0.77
AMD1P4-201ENST00000299540 MAPKBP1O60336 1514 aa19.84■□□□□ 0.77
AMD1P4-201ENST00000299540 CDK13Q14004 1512 aaKnown RBP19.82■□□□□ 0.76
AMD1P4-201ENST00000299540 ARID3CA6NKF2 412 aa19.79■□□□□ 0.76
AMD1P4-201ENST00000299540 NPM1P06748 294 aaKnown RBP eCLIP19.79■□□□□ 0.76
AMD1P4-201ENST00000299540 ASXL2Q76L83 1435 aa19.79■□□□□ 0.76
AMD1P4-201ENST00000299540 CCDC18Q5T9S5 1454 aa19.76■□□□□ 0.75
AMD1P4-201ENST00000299540 ATP1B4Q9UN42 357 aaPredicted RBP19.75■□□□□ 0.75
AMD1P4-201ENST00000299540 MAP3K1Q13233 1512 aa19.73■□□□□ 0.75
AMD1P4-201ENST00000299540 WDR7Q9Y4E6 1490 aa19.73■□□□□ 0.75
AMD1P4-201ENST00000299540 MAGI3Q5TCQ9 1506 aa19.73■□□□□ 0.75
AMD1P4-201ENST00000299540 ABCC10Q5T3U5 1492 aa19.71■□□□□ 0.75
AMD1P4-201ENST00000299540 TIAM1Q13009 1591 aa19.69■□□□□ 0.74
AMD1P4-201ENST00000299540 CFAP43Q8NDM7 1665 aa19.69■□□□□ 0.74
AMD1P4-201ENST00000299540 PLEKHD1A6NEE1 506 aa19.69■□□□□ 0.74
AMD1P4-201ENST00000299540 TROQ12816 1431 aaPredicted RBP19.67■□□□□ 0.74
AMD1P4-201ENST00000299540 DIP2BQ9P265 1576 aa19.67■□□□□ 0.74
AMD1P4-201ENST00000299540 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.67■□□□□ 0.74
AMD1P4-201ENST00000299540 HNRNPUL2Q1KMD3 747 aaKnown RBP19.67■□□□□ 0.74
AMD1P4-201ENST00000299540 GLI2P10070 1586 aa19.66■□□□□ 0.74
AMD1P4-201ENST00000299540 KIF13AQ9H1H9 1805 aa19.65■□□□□ 0.74
AMD1P4-201ENST00000299540 CDK11AQ9UQ88 783 aaPredicted RBP19.64■□□□□ 0.73
AMD1P4-201ENST00000299540 KANK4Q5T7N3 995 aaPredicted RBP19.63■□□□□ 0.73
AMD1P4-201ENST00000299540 LRRC9Q6ZRR7 1453 aa19.61■□□□□ 0.73
AMD1P4-201ENST00000299540 KCNH8Q96L42 1107 aa19.6■□□□□ 0.73
AMD1P4-201ENST00000299540 KIF14Q15058 1648 aa19.59■□□□□ 0.73
AMD1P4-201ENST00000299540 FAM69CQ0P6D2 419 aa19.59■□□□□ 0.73
AMD1P4-201ENST00000299540 ABCA9Q8IUA7 1624 aa19.58■□□□□ 0.73
AMD1P4-201ENST00000299540 EHBP1L1Q8N3D4 1523 aa19.58■□□□□ 0.73
AMD1P4-201ENST00000299540 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.58■□□□□ 0.73
AMD1P4-201ENST00000299540 MTUS2Q5JR59 1369 aa19.57■□□□□ 0.72
AMD1P4-201ENST00000299540 MAP3K4Q9Y6R4 1608 aa19.56■□□□□ 0.72
AMD1P4-201ENST00000299540 TTC37Q6PGP7 1564 aa19.54■□□□□ 0.72
AMD1P4-201ENST00000299540 PLPPR3Q6T4P5 718 aa19.54■□□□□ 0.72
AMD1P4-201ENST00000299540 PPRC1Q5VV67 1664 aaKnown RBP19.52■□□□□ 0.72
AMD1P4-201ENST00000299540 APLP2Q06481 763 aa19.51■□□□□ 0.71
AMD1P4-201ENST00000299540 TRHP20396 242 aaPredicted RBP19.51■□□□□ 0.71
AMD1P4-201ENST00000299540 CD109Q6YHK3 1445 aa19.5■□□□□ 0.71
AMD1P4-201ENST00000299540 NCOA2Q15596 1464 aa19.5■□□□□ 0.71
AMD1P4-201ENST00000299540 PLCH2O75038 1416 aa19.48■□□□□ 0.71
AMD1P4-201ENST00000299540 SUPT6HQ7KZ85 1726 aaKnown RBP19.48■□□□□ 0.71
AMD1P4-201ENST00000299540 GPATCH8Q9UKJ3 1502 aaKnown RBP19.48■□□□□ 0.71
AMD1P4-201ENST00000299540 ARAP3Q8WWN8 1544 aa19.46■□□□□ 0.71
AMD1P4-201ENST00000299540 CDC42BPAQ5VT25 1732 aa19.45■□□□□ 0.7
AMD1P4-201ENST00000299540 CDC42BPBQ9Y5S2 1711 aa19.43■□□□□ 0.7
AMD1P4-201ENST00000299540 MYO5CQ9NQX4 1742 aa19.42■□□□□ 0.7
AMD1P4-201ENST00000299540 TSPOAP1O95153 1857 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms