RNA–Protein interactions for RNA: ENST00000299267.8

GABRB3-201, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 1 (best) BASIC

Gene GABRB3, Length 4,494 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-201ENST00000299267 NEFLP07196 543 aa14.39□□□□□ -0.11
GABRB3-201ENST00000299267 KDM2AQ9Y2K7 1162 aa14.37□□□□□ -0.11
GABRB3-201ENST00000299267 NESP48681 1621 aa14.36□□□□□ -0.11
GABRB3-201ENST00000299267 ESF1Q9H501 851 aaKnown RBP14.35□□□□□ -0.11
GABRB3-201ENST00000299267 RAPGEF2Q9Y4G8 1499 aa14.35□□□□□ -0.11
GABRB3-201ENST00000299267 BICRAQ9NZM4 1560 aa14.33□□□□□ -0.12
GABRB3-201ENST00000299267 RAD54L2Q9Y4B4 1467 aa14.33□□□□□ -0.12
GABRB3-201ENST00000299267 TONSLQ96HA7 1378 aa14.33□□□□□ -0.12
GABRB3-201ENST00000299267 STAG3Q9UJ98 1225 aa14.3□□□□□ -0.12
GABRB3-201ENST00000299267 CC2D2AQ9P2K1 1620 aa14.28□□□□□ -0.12
GABRB3-201ENST00000299267 RGL3Q3MIN7 710 aa14.28□□□□□ -0.12
GABRB3-201ENST00000299267 JPH4Q96JJ6 628 aa14.27□□□□□ -0.12
GABRB3-201ENST00000299267 DDX10Q13206 875 aaKnown RBP14.27□□□□□ -0.12
GABRB3-201ENST00000299267 FHOD3Q2V2M9 1422 aa14.26□□□□□ -0.13
GABRB3-201ENST00000299267 FGD5Q6ZNL6 1462 aa14.25□□□□□ -0.13
GABRB3-201ENST00000299267 ANP32CO43423 234 aa14.25□□□□□ -0.13
GABRB3-201ENST00000299267 SIN3AQ96ST3 1273 aa14.25□□□□□ -0.13
GABRB3-201ENST00000299267 VPS8Q8N3P4 1428 aa14.24□□□□□ -0.13
GABRB3-201ENST00000299267 IGF1RP08069 1367 aa14.23□□□□□ -0.13
GABRB3-201ENST00000299267 AQRO60306 1485 aaKnown RBP eCLIP14.23□□□□□ -0.13
GABRB3-201ENST00000299267 FHAD1B1AJZ9 1412 aa14.22□□□□□ -0.13
GABRB3-201ENST00000299267 TRHP20396 242 aaPredicted RBP14.19□□□□□ -0.14
GABRB3-201ENST00000299267 CCNB3Q8WWL7 1395 aa14.19□□□□□ -0.14
GABRB3-201ENST00000299267 CFTRP13569 1480 aa14.17□□□□□ -0.14
GABRB3-201ENST00000299267 ARID4BQ4LE39 1312 aaPredicted RBP14.16□□□□□ -0.14
GABRB3-201ENST00000299267 FOXD1Q16676 465 aa14.15□□□□□ -0.14
GABRB3-201ENST00000299267 CARMIL2Q6F5E8 1435 aa14.14□□□□□ -0.15
GABRB3-201ENST00000299267 GAPVD1Q14C86 1478 aa14.14□□□□□ -0.15
GABRB3-201ENST00000299267 MLECQ14165 292 aa14.13□□□□□ -0.15
GABRB3-201ENST00000299267 CYB5RLQ6IPT4 315 aa14.13□□□□□ -0.15
GABRB3-201ENST00000299267 SYNJ1O43426 1573 aa14.1□□□□□ -0.15
GABRB3-201ENST00000299267 FMN1Q68DA7 1419 aa14.08□□□□□ -0.15
GABRB3-201ENST00000299267 HNRNPMP52272 730 aaKnown RBP eCLIP14.08□□□□□ -0.15
GABRB3-201ENST00000299267 SALL2Q9Y467 1007 aaPredicted RBP14.08□□□□□ -0.16
GABRB3-201ENST00000299267 UNC13AQ9UPW8 1703 aa14.07□□□□□ -0.16
GABRB3-201ENST00000299267 SENP3-EIF4A1A0A087X0R7 540 aa14.07□□□□□ -0.16
GABRB3-201ENST00000299267 GGT6Q6P531 493 aa14.06□□□□□ -0.16
GABRB3-201ENST00000299267 PLEKHG5O94827 1062 aa14.05□□□□□ -0.16
GABRB3-201ENST00000299267 OSCARQ8IYS5 282 aa14.05□□□□□ -0.16
GABRB3-201ENST00000299267 FAM9BQ8IZU0 186 aa14.04□□□□□ -0.16
GABRB3-201ENST00000299267 MIER1Q8N108 512 aa14.04□□□□□ -0.16
GABRB3-201ENST00000299267 HMGXB3Q12766 1538 aa14.04□□□□□ -0.16
GABRB3-201ENST00000299267 ARHGAP35Q9NRY4 1499 aa14.03□□□□□ -0.16
GABRB3-201ENST00000299267 SLC24A1O60721 1099 aa14.03□□□□□ -0.16
GABRB3-201ENST00000299267 CUX1P39880 1505 aa14.02□□□□□ -0.16
GABRB3-201ENST00000299267 GTF3C3Q9Y5Q9 886 aa14.02□□□□□ -0.16
GABRB3-201ENST00000299267 EIF4G2P78344 907 aaKnown RBP eCLIP14.01□□□□□ -0.17
GABRB3-201ENST00000299267 PTPRGP23470 1445 aa14.01□□□□□ -0.17
GABRB3-201ENST00000299267 PPP1R15AO75807 674 aaPredicted RBP14□□□□□ -0.17
GABRB3-201ENST00000299267 TOPBP1Q92547 1522 aa14□□□□□ -0.17
GABRB3-201ENST00000299267 POLA1P09884 1462 aaPredicted RBP14□□□□□ -0.17
GABRB3-201ENST00000299267 EFCAB2Q5VUJ9 269 aa13.99□□□□□ -0.17
GABRB3-201ENST00000299267 PKD2Q13563 968 aa13.98□□□□□ -0.17
GABRB3-201ENST00000299267 ERICH6Q7L0X2 663 aa13.98□□□□□ -0.17
GABRB3-201ENST00000299267 BCL11AQ9H165 835 aa13.97□□□□□ -0.17
GABRB3-201ENST00000299267 DCAF11Q8TEB1 546 aa13.97□□□□□ -0.17
GABRB3-201ENST00000299267 RAB3GAP2Q9H2M9 1393 aa13.97□□□□□ -0.17
GABRB3-201ENST00000299267 ZNF644Q9H582 1327 aaPredicted RBP13.96□□□□□ -0.17
GABRB3-201ENST00000299267 HNRNPUQ00839 825 aaKnown RBP eCLIP13.96□□□□□ -0.18
GABRB3-201ENST00000299267 CARD11Q9BXL7 1154 aa13.95□□□□□ -0.18
GABRB3-201ENST00000299267 SETD5Q9C0A6 1442 aa13.95□□□□□ -0.18
GABRB3-201ENST00000299267 TMC1Q8TDI8 760 aa13.94□□□□□ -0.18
GABRB3-201ENST00000299267 KIF3BO15066 747 aa13.93□□□□□ -0.18
GABRB3-201ENST00000299267 MRC2Q9UBG0 1479 aa13.92□□□□□ -0.18
GABRB3-201ENST00000299267 MPHOSPH9Q99550 1183 aa13.92□□□□□ -0.18
GABRB3-201ENST00000299267 NUP155O75694 1391 aa13.91□□□□□ -0.18
GABRB3-201ENST00000299267 MRS2Q9HD23 443 aa13.9□□□□□ -0.18
GABRB3-201ENST00000299267 GRIN2BQ13224 1484 aa13.9□□□□□ -0.18
GABRB3-201ENST00000299267 SAFB2Q14151 953 aaKnown RBP eCLIP13.88□□□□□ -0.19
GABRB3-201ENST00000299267 ARAP1Q96P48 1450 aa13.88□□□□□ -0.19
GABRB3-201ENST00000299267 TOP2BQ02880 1626 aa13.88□□□□□ -0.19
GABRB3-201ENST00000299267 SPAG9O60271 1321 aaKnown RBP13.86□□□□□ -0.19
GABRB3-201ENST00000299267 NUTM2DQ5VT03 806 aaPredicted RBP13.86□□□□□ -0.19
GABRB3-201ENST00000299267 C14orf37Q86TY3 774 aa13.86□□□□□ -0.19
GABRB3-201ENST00000299267 KIF21BO75037 1637 aa13.86□□□□□ -0.19
GABRB3-201ENST00000299267 SCAF1Q9H7N4 1312 aaKnown RBP13.86□□□□□ -0.19
GABRB3-201ENST00000299267 ACIN1Q9UKV3 1341 aaKnown RBP13.86□□□□□ -0.19
GABRB3-201ENST00000299267 CLSPNQ9HAW4 1339 aa13.85□□□□□ -0.19
GABRB3-201ENST00000299267 NEFMP07197 916 aa13.85□□□□□ -0.19
GABRB3-201ENST00000299267 PRXQ9BXM0 1461 aa13.85□□□□□ -0.19
GABRB3-201ENST00000299267 CCDC18Q5T9S5 1454 aa13.84□□□□□ -0.19
GABRB3-201ENST00000299267 SNAPC4Q5SXM2 1469 aa13.83□□□□□ -0.2
GABRB3-201ENST00000299267 PHLDB1Q86UU1 1377 aa13.83□□□□□ -0.2
GABRB3-201ENST00000299267 ANKRD30AQ9BXX3 1397 aa13.83□□□□□ -0.2
GABRB3-201ENST00000299267 ZBTB7CA1YPR0 619 aa13.82□□□□□ -0.2
GABRB3-201ENST00000299267 PRG4Q92954 1404 aaPredicted RBP13.81□□□□□ -0.2
GABRB3-201ENST00000299267 STK26Q9P289 416 aa13.81□□□□□ -0.2
GABRB3-201ENST00000299267 IFT140Q96RY7 1462 aa13.81□□□□□ -0.2
GABRB3-201ENST00000299267 L3MBTL2Q969R5 705 aa13.81□□□□□ -0.2
GABRB3-201ENST00000299267 CANXP27824 592 aaKnown RBP13.8□□□□□ -0.2
GABRB3-201ENST00000299267 TNNT2P45379 298 aaPredicted RBP13.8□□□□□ -0.2
GABRB3-201ENST00000299267 PEG3Q9GZU2 1588 aa13.8□□□□□ -0.2
GABRB3-201ENST00000299267 FAM69CQ0P6D2 419 aa13.8□□□□□ -0.2
GABRB3-201ENST00000299267 URB2Q14146 1524 aaKnown RBP13.79□□□□□ -0.2
GABRB3-201ENST00000299267 DNMBPQ6XZF7 1577 aa13.79□□□□□ -0.2
GABRB3-201ENST00000299267 POGKQ9P215 609 aa13.79□□□□□ -0.2
GABRB3-201ENST00000299267 ZNF608Q9ULD9 1512 aaPredicted RBP13.79□□□□□ -0.2
GABRB3-201ENST00000299267 KANK1Q14678 1352 aa13.79□□□□□ -0.2
GABRB3-201ENST00000299267 PPM1GO15355 546 aaPredicted RBP13.78□□□□□ -0.2
GABRB3-201ENST00000299267 AFAP1Q8N556 730 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms