RNA–Protein interactions for RNA: ENST00000299130.7

BCCIP-202, Transcript of BRCA2 and CDKN1A interacting protein, humanhuman

TSL 1 (best) BASIC

Gene BCCIP, Length 2,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCCIP-202ENST00000299130 LRRC9Q6ZRR7 1453 aa19.96■□□□□ 0.79
BCCIP-202ENST00000299130 PHLDB1Q86UU1 1377 aa19.94■□□□□ 0.78
BCCIP-202ENST00000299130 DNMBPQ6XZF7 1577 aa19.94■□□□□ 0.78
BCCIP-202ENST00000299130 RAB3GAP2Q9H2M9 1393 aa19.94■□□□□ 0.78
BCCIP-202ENST00000299130 TOPBP1Q92547 1522 aa19.93■□□□□ 0.78
BCCIP-202ENST00000299130 POLA1P09884 1462 aaPredicted RBP19.93■□□□□ 0.78
BCCIP-202ENST00000299130 PCF11O94913 1555 aaKnown RBP19.92■□□□□ 0.78
BCCIP-202ENST00000299130 ABCA10Q8WWZ4 1543 aa19.91■□□□□ 0.78
BCCIP-202ENST00000299130 FHOD3Q2V2M9 1422 aa19.9■□□□□ 0.78
BCCIP-202ENST00000299130 ATP1B4Q9UN42 357 aaPredicted RBP19.9■□□□□ 0.78
BCCIP-202ENST00000299130 FHAD1B1AJZ9 1412 aa19.88■□□□□ 0.77
BCCIP-202ENST00000299130 MAPKBP1O60336 1514 aa19.88■□□□□ 0.77
BCCIP-202ENST00000299130 CFAP43Q8NDM7 1665 aa19.87■□□□□ 0.77
BCCIP-202ENST00000299130 FAM50AQ14320 339 aaKnown RBP19.85■□□□□ 0.77
BCCIP-202ENST00000299130 SETD5Q9C0A6 1442 aa19.84■□□□□ 0.77
BCCIP-202ENST00000299130 URB2Q14146 1524 aaKnown RBP19.8■□□□□ 0.76
BCCIP-202ENST00000299130 CUL7Q14999 1698 aa19.79■□□□□ 0.76
BCCIP-202ENST00000299130 CTTNBP2Q8WZ74 1663 aa19.77■□□□□ 0.76
BCCIP-202ENST00000299130 FYCO1Q9BQS8 1478 aa19.77■□□□□ 0.76
BCCIP-202ENST00000299130 EFCAB5A4FU69 1503 aa19.77■□□□□ 0.75
BCCIP-202ENST00000299130 CASKIN1Q8WXD9 1431 aa19.76■□□□□ 0.75
BCCIP-202ENST00000299130 SIN3AQ96ST3 1273 aa19.76■□□□□ 0.75
BCCIP-202ENST00000299130 WDR97A6NE52 1622 aa19.75■□□□□ 0.75
BCCIP-202ENST00000299130 TDRD9Q8NDG6 1382 aaKnown RBP19.75■□□□□ 0.75
BCCIP-202ENST00000299130 DNAJC5BQ9UF47 199 aa19.74■□□□□ 0.75
BCCIP-202ENST00000299130 AQRO60306 1485 aaKnown RBP eCLIP19.72■□□□□ 0.752e-6■■□□□ 14.4
BCCIP-202ENST00000299130 LAMC3Q9Y6N6 1575 aa19.71■□□□□ 0.75
BCCIP-202ENST00000299130 SNAPC4Q5SXM2 1469 aa19.69■□□□□ 0.74
BCCIP-202ENST00000299130 ABCA5Q8WWZ7 1642 aa19.68■□□□□ 0.74
BCCIP-202ENST00000299130 FMN1Q68DA7 1419 aa19.66■□□□□ 0.74
BCCIP-202ENST00000299130 GAPVD1Q14C86 1478 aa19.65■□□□□ 0.74
BCCIP-202ENST00000299130 LRRIQ1Q96JM4 1722 aa19.65■□□□□ 0.74
BCCIP-202ENST00000299130 FGD6Q6ZV73 1430 aa19.63■□□□□ 0.73
BCCIP-202ENST00000299130 SAMD9Q5K651 1589 aa19.63■□□□□ 0.73
BCCIP-202ENST00000299130 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.62■□□□□ 0.73
BCCIP-202ENST00000299130 KCNH8Q96L42 1107 aa19.62■□□□□ 0.73
BCCIP-202ENST00000299130 MTUS2Q5JR59 1369 aa19.6■□□□□ 0.73
BCCIP-202ENST00000299130 PTPRKQ15262 1439 aa19.6■□□□□ 0.73
BCCIP-202ENST00000299130 KIF21AQ7Z4S6 1674 aa19.59■□□□□ 0.73
BCCIP-202ENST00000299130 PDS5BQ9NTI5 1447 aa19.58■□□□□ 0.73
BCCIP-202ENST00000299130 GRIN2BQ13224 1484 aa19.57■□□□□ 0.72
BCCIP-202ENST00000299130 HIRIP3Q9BW71 556 aaPredicted RBP19.55■□□□□ 0.72
BCCIP-202ENST00000299130 DDX10Q13206 875 aaKnown RBP19.54■□□□□ 0.72
BCCIP-202ENST00000299130 NCOA2Q15596 1464 aa19.54■□□□□ 0.72
BCCIP-202ENST00000299130 PPP1R15AO75807 674 aaPredicted RBP19.53■□□□□ 0.72
BCCIP-202ENST00000299130 TARBP1Q13395 1621 aaKnown RBP19.53■□□□□ 0.72
BCCIP-202ENST00000299130 CCDC18Q5T9S5 1454 aa19.52■□□□□ 0.72
BCCIP-202ENST00000299130 TIMELESSQ9UNS1 1208 aa19.5■□□□□ 0.71
BCCIP-202ENST00000299130 MYOM3Q5VTT5 1437 aa19.5■□□□□ 0.71
BCCIP-202ENST00000299130 MAGI3Q5TCQ9 1506 aa19.49■□□□□ 0.71
BCCIP-202ENST00000299130 HFM1A2PYH4 1435 aa19.49■□□□□ 0.71
BCCIP-202ENST00000299130 PTPN23Q9H3S7 1636 aa19.49■□□□□ 0.71
BCCIP-202ENST00000299130 SUPT16HQ9Y5B9 1047 aaKnown RBP19.47■□□□□ 0.71
BCCIP-202ENST00000299130 NAIPQ13075 1403 aa19.46■□□□□ 0.71
BCCIP-202ENST00000299130 SUPT6HQ7KZ85 1726 aaKnown RBP19.46■□□□□ 0.71
BCCIP-202ENST00000299130 THOC2Q8NI27 1593 aaKnown RBP19.46■□□□□ 0.71
BCCIP-202ENST00000299130 EHBP1L1Q8N3D4 1523 aa19.45■□□□□ 0.7
BCCIP-202ENST00000299130 UACAQ9BZF9 1416 aa19.44■□□□□ 0.7
BCCIP-202ENST00000299130 PBRM1Q86U86 1689 aa19.43■□□□□ 0.7
BCCIP-202ENST00000299130 UGGT2Q9NYU1 1516 aa19.43■□□□□ 0.7
BCCIP-202ENST00000299130 ARHGEF11O15085 1522 aa19.42■□□□□ 0.7
BCCIP-202ENST00000299130 TONSLQ96HA7 1378 aa19.41■□□□□ 0.7
BCCIP-202ENST00000299130 ARID3CA6NKF2 412 aa19.39■□□□□ 0.69
BCCIP-202ENST00000299130 RRP7BPQ9NSQ0 103 aa19.39■□□□□ 0.69
BCCIP-202ENST00000299130 CHIC2Q9UKJ5 165 aa19.39■□□□□ 0.69
BCCIP-202ENST00000299130 IQGAP2Q13576 1575 aa19.37■□□□□ 0.69
BCCIP-202ENST00000299130 ADAMTS12P58397 1594 aa19.36■□□□□ 0.69
BCCIP-202ENST00000299130 CDK13Q14004 1512 aaKnown RBP19.36■□□□□ 0.69
BCCIP-202ENST00000299130 EPRSP07814 1512 aaKnown RBP19.35■□□□□ 0.69
BCCIP-202ENST00000299130 HECW1Q76N89 1606 aa19.35■□□□□ 0.69
BCCIP-202ENST00000299130 KDM5BQ9UGL1 1544 aa19.33■□□□□ 0.69
BCCIP-202ENST00000299130 TCOF1Q13428 1488 aaKnown RBP19.33■□□□□ 0.69
BCCIP-202ENST00000299130 KDM6BO15054 1643 aa19.32■□□□□ 0.68
BCCIP-202ENST00000299130 DENND4BO75064 1496 aaPredicted RBP19.32■□□□□ 0.68
BCCIP-202ENST00000299130 MRC2Q9UBG0 1479 aa19.31■□□□□ 0.68
BCCIP-202ENST00000299130 ZNF608Q9ULD9 1512 aaPredicted RBP19.3■□□□□ 0.68
BCCIP-202ENST00000299130 WDR62O43379 1518 aa19.29■□□□□ 0.68
BCCIP-202ENST00000299130 MYT1Q01538 1121 aa19.28■□□□□ 0.68
BCCIP-202ENST00000299130 GCC2Q8IWJ2 1684 aa19.27■□□□□ 0.68
BCCIP-202ENST00000299130 ANP32CO43423 234 aa19.27■□□□□ 0.68
BCCIP-202ENST00000299130 TRIM52Q96A61 297 aa19.26■□□□□ 0.67
BCCIP-202ENST00000299130 CCER2I3L3R5 266 aa19.24■□□□□ 0.67
BCCIP-202ENST00000299130 MIA2Q96PC5 1412 aa19.22■□□□□ 0.67
BCCIP-202ENST00000299130 FOXD1Q16676 465 aa19.22■□□□□ 0.67
BCCIP-202ENST00000299130 DISP1Q96F81 1524 aa19.2■□□□□ 0.66
BCCIP-202ENST00000299130 AKNAQ7Z591 1439 aa19.2■□□□□ 0.66
BCCIP-202ENST00000299130 MPHOSPH9Q99550 1183 aa19.2■□□□□ 0.66
BCCIP-202ENST00000299130 BCANQ96GW7 911 aa19.19■□□□□ 0.66
BCCIP-202ENST00000299130 IFT140Q96RY7 1462 aa19.18■□□□□ 0.66
BCCIP-202ENST00000299130 ZNF644Q9H582 1327 aaPredicted RBP19.18■□□□□ 0.66
BCCIP-202ENST00000299130 KIAA0556O60303 1618 aa19.18■□□□□ 0.66
BCCIP-202ENST00000299130 HSPA5P11021 654 aaKnown RBP19.17■□□□□ 0.66
BCCIP-202ENST00000299130 FKBP8Q14318 412 aa19.17■□□□□ 0.66
BCCIP-202ENST00000299130 KIAA0586Q9BVV6 1533 aa19.16■□□□□ 0.66
BCCIP-202ENST00000299130 NUP153P49790 1475 aaKnown RBP19.16■□□□□ 0.66
BCCIP-202ENST00000299130 DAPK1P53355 1430 aa19.14■□□□□ 0.65
BCCIP-202ENST00000299130 TSHZ2Q9NRE2 1034 aa19.14■□□□□ 0.65
BCCIP-202ENST00000299130 WASHC2AQ641Q2 1341 aa19.13■□□□□ 0.65
BCCIP-202ENST00000299130 L3MBTL2Q969R5 705 aa19.13■□□□□ 0.65
BCCIP-202ENST00000299130 ABCC5O15440 1437 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms