RNA–Protein interactions for RNA: ENST00000298910.11

LRRK2-201, Transcript of leucine rich repeat kinase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRK2, Length 9,158 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2-201ENST00000298910 FMN1Q68DA7 1419 aa8.12□□□□□ -1.11
LRRK2-201ENST00000298910 SETD5Q9C0A6 1442 aa8.12□□□□□ -1.11
LRRK2-201ENST00000298910 PEG3Q9GZU2 1588 aa8.12□□□□□ -1.11
LRRK2-201ENST00000298910 BICRAQ9NZM4 1560 aa8.12□□□□□ -1.11
LRRK2-201ENST00000298910 CHIC2Q9UKJ5 165 aa8.12□□□□□ -1.11
LRRK2-201ENST00000298910 HMGXB3Q12766 1538 aa8.12□□□□□ -1.11
LRRK2-201ENST00000298910 CADPSQ9ULU8 1353 aa8.12□□□□□ -1.11
LRRK2-201ENST00000298910 PDS5BQ9NTI5 1447 aa8.11□□□□□ -1.11
LRRK2-201ENST00000298910 CHMP7Q8WUX9 453 aaPredicted RBP8.11□□□□□ -1.11
LRRK2-201ENST00000298910 FKBP8Q14318 412 aa8.1□□□□□ -1.11
LRRK2-201ENST00000298910 TIMELESSQ9UNS1 1208 aa8.1□□□□□ -1.11
LRRK2-201ENST00000298910 HNRNPUQ00839 825 aaKnown RBP eCLIP8.09□□□□□ -1.11
LRRK2-201ENST00000298910 SLC4A1APQ9BWU0 796 aaKnown RBP8.09□□□□□ -1.11
LRRK2-201ENST00000298910 EIF4G2P78344 907 aaKnown RBP eCLIP8.09□□□□□ -1.11
LRRK2-201ENST00000298910 NCAPD3P42695 1498 aa8.09□□□□□ -1.12
LRRK2-201ENST00000298910 RRP7BPQ9NSQ0 103 aa8.08□□□□□ -1.12
LRRK2-201ENST00000298910 KANK4Q5T7N3 995 aaPredicted RBP8.08□□□□□ -1.12
LRRK2-201ENST00000298910 BIVM-ERCC5R4GMW8 1640 aa8.07□□□□□ -1.12
LRRK2-201ENST00000298910 TSPY4P0CV99 314 aa8.07□□□□□ -1.12
LRRK2-201ENST00000298910 TSPY10P0CW01 314 aa8.07□□□□□ -1.12
LRRK2-201ENST00000298910 FANCD2Q9BXW9 1451 aa8.07□□□□□ -1.12
LRRK2-201ENST00000298910 ERCC6Q03468 1493 aa8.07□□□□□ -1.12
LRRK2-201ENST00000298910 RAB3GAP2Q9H2M9 1393 aa8.06□□□□□ -1.12
LRRK2-201ENST00000298910 RTL5Q5HYW3 569 aaPredicted RBP8.06□□□□□ -1.12
LRRK2-201ENST00000298910 FGD5Q6ZNL6 1462 aa8.05□□□□□ -1.12
LRRK2-201ENST00000298910 FAM9BQ8IZU0 186 aa8.03□□□□□ -1.12
LRRK2-201ENST00000298910 CFTRP13569 1480 aa8.03□□□□□ -1.12
LRRK2-201ENST00000298910 HIRIP3Q9BW71 556 aaPredicted RBP8.03□□□□□ -1.12
LRRK2-201ENST00000298910 TMC1Q8TDI8 760 aa8.03□□□□□ -1.12
LRRK2-201ENST00000298910 PLEKHD1A6NEE1 506 aa8.02□□□□□ -1.12
LRRK2-201ENST00000298910 CUX1P39880 1505 aa8.02□□□□□ -1.13
LRRK2-201ENST00000298910 CFDP1Q9UEE9 299 aaPredicted RBP8.02□□□□□ -1.13
LRRK2-201ENST00000298910 SIN3AQ96ST3 1273 aa8.02□□□□□ -1.13
LRRK2-201ENST00000298910 MRS2Q9HD23 443 aa8.01□□□□□ -1.13
LRRK2-201ENST00000298910 CC2D2AQ9P2K1 1620 aa8.01□□□□□ -1.13
LRRK2-201ENST00000298910 CUL7Q14999 1698 aa8.01□□□□□ -1.13
LRRK2-201ENST00000298910 FHOD3Q2V2M9 1422 aa8.01□□□□□ -1.13
LRRK2-201ENST00000298910 ANP32AP39687 249 aaKnown RBP8□□□□□ -1.13
LRRK2-201ENST00000298910 DHX57Q6P158 1386 aaKnown RBP8□□□□□ -1.13
LRRK2-201ENST00000298910 CCDC18Q5T9S5 1454 aa7.99□□□□□ -1.13
LRRK2-201ENST00000298910 SUPT6HQ7KZ85 1726 aaKnown RBP7.99□□□□□ -1.13
LRRK2-201ENST00000298910 EFCAB5A4FU69 1503 aa7.99□□□□□ -1.13
LRRK2-201ENST00000298910 PRXQ9BXM0 1461 aa7.98□□□□□ -1.13
LRRK2-201ENST00000298910 CTTNBP2Q8WZ74 1663 aa7.98□□□□□ -1.13
LRRK2-201ENST00000298910 LRRC9Q6ZRR7 1453 aa7.98□□□□□ -1.13
LRRK2-201ENST00000298910 CCER2I3L3R5 266 aa7.98□□□□□ -1.13
LRRK2-201ENST00000298910 ARAP1Q96P48 1450 aa7.98□□□□□ -1.13
LRRK2-201ENST00000298910 TDRD9Q8NDG6 1382 aaKnown RBP7.98□□□□□ -1.13
LRRK2-201ENST00000298910 GAPVD1Q14C86 1478 aa7.97□□□□□ -1.13
LRRK2-201ENST00000298910 FYCO1Q9BQS8 1478 aa7.97□□□□□ -1.13
LRRK2-201ENST00000298910 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.97□□□□□ -1.13
LRRK2-201ENST00000298910 KDM2AQ9Y2K7 1162 aa7.97□□□□□ -1.13
LRRK2-201ENST00000298910 DNMBPQ6XZF7 1577 aa7.97□□□□□ -1.13
LRRK2-201ENST00000298910 IGF1RP08069 1367 aa7.97□□□□□ -1.13
LRRK2-201ENST00000298910 TIAM1Q13009 1591 aa7.97□□□□□ -1.13
LRRK2-201ENST00000298910 CARMIL2Q6F5E8 1435 aa7.97□□□□□ -1.13
LRRK2-201ENST00000298910 CANXP27824 592 aaKnown RBP7.96□□□□□ -1.14
LRRK2-201ENST00000298910 RRBP1Q9P2E9 1410 aaKnown RBP7.95□□□□□ -1.14
LRRK2-201ENST00000298910 CCDC136Q96JN2 1154 aa7.94□□□□□ -1.14
LRRK2-201ENST00000298910 NPM1P06748 294 aaKnown RBP eCLIP7.94□□□□□ -1.14
LRRK2-201ENST00000298910 SUPT16HQ9Y5B9 1047 aaKnown RBP7.93□□□□□ -1.14
LRRK2-201ENST00000298910 CASKIN1Q8WXD9 1431 aa7.93□□□□□ -1.14
LRRK2-201ENST00000298910 NEFMP07197 916 aa7.93□□□□□ -1.14
LRRK2-201ENST00000298910 LAMC3Q9Y6N6 1575 aa7.92□□□□□ -1.14
LRRK2-201ENST00000298910 RAD54L2Q9Y4B4 1467 aa7.92□□□□□ -1.14
LRRK2-201ENST00000298910 WDR43Q15061 677 aaKnown RBP eCLIP7.92□□□□□ -1.14
LRRK2-201ENST00000298910 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.91□□□□□ -1.14
LRRK2-201ENST00000298910 HECW1Q76N89 1606 aa7.91□□□□□ -1.14
LRRK2-201ENST00000298910 PPP1R15AO75807 674 aaPredicted RBP7.91□□□□□ -1.14
LRRK2-201ENST00000298910 CARD11Q9BXL7 1154 aa7.91□□□□□ -1.14
LRRK2-201ENST00000298910 TOPBP1Q92547 1522 aa7.91□□□□□ -1.14
LRRK2-201ENST00000298910 MPHOSPH9Q99550 1183 aa7.9□□□□□ -1.14
LRRK2-201ENST00000298910 FGD6Q6ZV73 1430 aa7.9□□□□□ -1.14
LRRK2-201ENST00000298910 MAP3K1Q13233 1512 aa7.9□□□□□ -1.14
LRRK2-201ENST00000298910 CDCA8Q53HL2 280 aa7.9□□□□□ -1.14
LRRK2-201ENST00000298910 PCF11O94913 1555 aaKnown RBP7.9□□□□□ -1.15
LRRK2-201ENST00000298910 EHBP1L1Q8N3D4 1523 aa7.9□□□□□ -1.15
LRRK2-201ENST00000298910 ANKRD30AQ9BXX3 1397 aa7.89□□□□□ -1.15
LRRK2-201ENST00000298910 MYOM3Q5VTT5 1437 aa7.88□□□□□ -1.15
LRRK2-201ENST00000298910 CHGAP10645 457 aaKnown RBP7.88□□□□□ -1.15
LRRK2-201ENST00000298910 IRX6P78412 446 aaPredicted RBP7.88□□□□□ -1.15
LRRK2-201ENST00000298910 ZBTB47Q9UFB7 747 aaPredicted RBP7.88□□□□□ -1.15
LRRK2-201ENST00000298910 KCNH8Q96L42 1107 aa7.88□□□□□ -1.15
LRRK2-201ENST00000298910 SALL2Q9Y467 1007 aaPredicted RBP7.88□□□□□ -1.15
LRRK2-201ENST00000298910 SLC24A1O60721 1099 aa7.88□□□□□ -1.15
LRRK2-201ENST00000298910 POLA1P09884 1462 aaPredicted RBP7.87□□□□□ -1.15
LRRK2-201ENST00000298910 KIF21AQ7Z4S6 1674 aa7.87□□□□□ -1.15
LRRK2-201ENST00000298910 HSPA5P11021 654 aaKnown RBP7.87□□□□□ -1.15
LRRK2-201ENST00000298910 CFAP43Q8NDM7 1665 aa7.87□□□□□ -1.15
LRRK2-201ENST00000298910 UACAQ9BZF9 1416 aa7.87□□□□□ -1.15
LRRK2-201ENST00000298910 RGL3Q3MIN7 710 aa7.87□□□□□ -1.15
LRRK2-201ENST00000298910 PHLDB1Q86UU1 1377 aa7.86□□□□□ -1.15
LRRK2-201ENST00000298910 PPP4R2Q9NY27 417 aa7.86□□□□□ -1.15
LRRK2-201ENST00000298910 NPM2Q86SE8 214 aaKnown RBP7.85□□□□□ -1.15
LRRK2-201ENST00000298910 ABCA10Q8WWZ4 1543 aa7.85□□□□□ -1.15
LRRK2-201ENST00000298910 NCOA2Q15596 1464 aa7.85□□□□□ -1.15
LRRK2-201ENST00000298910 ERICH6BQ5W0A0 696 aa7.85□□□□□ -1.15
LRRK2-201ENST00000298910 KNSTRNQ9Y448 316 aa7.85□□□□□ -1.15
LRRK2-201ENST00000298910 AQRO60306 1485 aaKnown RBP eCLIP7.84□□□□□ -1.15
LRRK2-201ENST00000298910 STAG3Q9UJ98 1225 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms