RNA–Protein interactions for RNA: ENST00000298428.13

SEC61A2-201, Transcript of Sec61 translocon alpha 2 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61A2, Length 1,893 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2-201ENST00000298428 ARHGAP35Q9NRY4 1499 aa29.2■■■□□ 2.27
SEC61A2-201ENST00000298428 CHMP7Q8WUX9 453 aaPredicted RBP29.18■■■□□ 2.26
SEC61A2-201ENST00000298428 ARAP1Q96P48 1450 aa29.18■■■□□ 2.26
SEC61A2-201ENST00000298428 VPS8Q8N3P4 1428 aa29.16■■■□□ 2.26
SEC61A2-201ENST00000298428 FBLN2P98095 1184 aa29.12■■■□□ 2.25
SEC61A2-201ENST00000298428 EFCAB5A4FU69 1503 aa29.1■■■□□ 2.25
SEC61A2-201ENST00000298428 IQGAP2Q13576 1575 aa29.09■■■□□ 2.25
SEC61A2-201ENST00000298428 KIAA0586Q9BVV6 1533 aa29.05■■■□□ 2.24
SEC61A2-201ENST00000298428 CEP170Q5SW79 1584 aa29.04■■■□□ 2.24
SEC61A2-201ENST00000298428 SAMD9Q5K651 1589 aa29.01■■■□□ 2.23
SEC61A2-201ENST00000298428 NUP160Q12769 1436 aa29.01■■■□□ 2.23
SEC61A2-201ENST00000298428 P3H3Q8IVL6 736 aa28.98■■■□□ 2.23
SEC61A2-201ENST00000298428 CHD1O14646 1710 aa28.97■■■□□ 2.23
SEC61A2-201ENST00000298428 FHOD3Q2V2M9 1422 aa28.97■■■□□ 2.23
SEC61A2-201ENST00000298428 UGGT2Q9NYU1 1516 aa28.94■■■□□ 2.22
SEC61A2-201ENST00000298428 PPARGC1BQ86YN6 1023 aaKnown RBP28.9■■■□□ 2.22
SEC61A2-201ENST00000298428 APLP2Q06481 763 aa28.87■■■□□ 2.21
SEC61A2-201ENST00000298428 FMN1Q68DA7 1419 aa28.84■■■□□ 2.21
SEC61A2-201ENST00000298428 DISP1Q96F81 1524 aa28.81■■■□□ 2.2
SEC61A2-201ENST00000298428 KIAA0556O60303 1618 aa28.8■■■□□ 2.2
SEC61A2-201ENST00000298428 PCF11O94913 1555 aaKnown RBP28.8■■■□□ 2.2
SEC61A2-201ENST00000298428 JPH4Q96JJ6 628 aa28.77■■■□□ 2.2
SEC61A2-201ENST00000298428 TRIM26Q12899 539 aaPredicted RBP28.76■■■□□ 2.2
SEC61A2-201ENST00000298428 FYCO1Q9BQS8 1478 aa28.75■■■□□ 2.19
SEC61A2-201ENST00000298428 CASKIN1Q8WXD9 1431 aa28.75■■■□□ 2.19
SEC61A2-201ENST00000298428 TTBK1Q5TCY1 1321 aaPredicted RBP28.73■■■□□ 2.19
SEC61A2-201ENST00000298428 PCGF6Q9BYE7 350 aa28.71■■■□□ 2.19
SEC61A2-201ENST00000298428 CARMIL2Q6F5E8 1435 aa28.7■■■□□ 2.18
SEC61A2-201ENST00000298428 ATP1B4Q9UN42 357 aaPredicted RBP28.67■■■□□ 2.18
SEC61A2-201ENST00000298428 MAP3K1Q13233 1512 aa28.67■■■□□ 2.18
SEC61A2-201ENST00000298428 TIAM1Q13009 1591 aa28.65■■■□□ 2.18
SEC61A2-201ENST00000298428 CLASP1Q7Z460 1538 aa28.64■■■□□ 2.17
SEC61A2-201ENST00000298428 SHROOM2Q13796 1616 aa28.63■■■□□ 2.17
SEC61A2-201ENST00000298428 PRG4Q92954 1404 aaPredicted RBP28.61■■■□□ 2.17
SEC61A2-201ENST00000298428 CFAP43Q8NDM7 1665 aa28.61■■■□□ 2.17
SEC61A2-201ENST00000298428 KANK4Q5T7N3 995 aaPredicted RBP28.6■■■□□ 2.17
SEC61A2-201ENST00000298428 HECW1Q76N89 1606 aa28.56■■■□□ 2.16
SEC61A2-201ENST00000298428 LRRIQ1Q96JM4 1722 aa28.52■■■□□ 2.16
SEC61A2-201ENST00000298428 LRRC9Q6ZRR7 1453 aa28.52■■■□□ 2.16
SEC61A2-201ENST00000298428 RAPGEF6Q8TEU7 1601 aa28.49■■■□□ 2.15
SEC61A2-201ENST00000298428 CCDC18Q5T9S5 1454 aa28.48■■■□□ 2.15
SEC61A2-201ENST00000298428 EPRSP07814 1512 aaKnown RBP28.44■■■□□ 2.14
SEC61A2-201ENST00000298428 ERCC6L2Q5T890 1561 aa28.44■■■□□ 2.14
SEC61A2-201ENST00000298428 PLB1Q6P1J6 1458 aa28.44■■■□□ 2.14
SEC61A2-201ENST00000298428 OSCARQ8IYS5 282 aa28.44■■■□□ 2.14
SEC61A2-201ENST00000298428 NUP153P49790 1475 aaKnown RBP28.42■■■□□ 2.14
SEC61A2-201ENST00000298428 PTPRGP23470 1445 aa28.42■■■□□ 2.14
SEC61A2-201ENST00000298428 CDK13Q14004 1512 aaKnown RBP28.39■■■□□ 2.13
SEC61A2-201ENST00000298428 ABCA8O94911 1581 aa28.38■■■□□ 2.13
SEC61A2-201ENST00000298428 MTUS2Q5JR59 1369 aa28.37■■■□□ 2.13
SEC61A2-201ENST00000298428 ARID3CA6NKF2 412 aa28.35■■■□□ 2.13
SEC61A2-201ENST00000298428 EHBP1L1Q8N3D4 1523 aa28.33■■■□□ 2.13
SEC61A2-201ENST00000298428 MAGI3Q5TCQ9 1506 aa28.3■■■□□ 2.12
SEC61A2-201ENST00000298428 UACAQ9BZF9 1416 aa28.26■■■□□ 2.11
SEC61A2-201ENST00000298428 PHLDB1Q86UU1 1377 aa28.25■■■□□ 2.11
SEC61A2-201ENST00000298428 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.25■■■□□ 2.11
SEC61A2-201ENST00000298428 HNRNPUL2Q1KMD3 747 aaKnown RBP28.25■■■□□ 2.11
SEC61A2-201ENST00000298428 RRBP1Q9P2E9 1410 aaKnown RBP28.24■■■□□ 2.11
SEC61A2-201ENST00000298428 SUPT6HQ7KZ85 1726 aaKnown RBP28.24■■■□□ 2.11
SEC61A2-201ENST00000298428 CDK11AQ9UQ88 783 aaPredicted RBP28.21■■■□□ 2.11
SEC61A2-201ENST00000298428 NCOA2Q15596 1464 aa28.2■■■□□ 2.11
SEC61A2-201ENST00000298428 ABCC2Q92887 1545 aa28.19■■■□□ 2.1
SEC61A2-201ENST00000298428 ATP10BO94823 1461 aa28.18■■■□□ 2.1
SEC61A2-201ENST00000298428 CCNB3Q8WWL7 1395 aa28.18■■■□□ 2.1
SEC61A2-201ENST00000298428 ARHGEF11O15085 1522 aa28.15■■■□□ 2.1
SEC61A2-201ENST00000298428 TROQ12816 1431 aaPredicted RBP28.13■■■□□ 2.09
SEC61A2-201ENST00000298428 UHRF1BP1LA0JNW5 1464 aa28.11■■■□□ 2.09
SEC61A2-201ENST00000298428 MYOM3Q5VTT5 1437 aa28.08■■■□□ 2.09
SEC61A2-201ENST00000298428 FGD6Q6ZV73 1430 aa28.07■■■□□ 2.08
SEC61A2-201ENST00000298428 PLEKHD1A6NEE1 506 aa28.06■■■□□ 2.08
SEC61A2-201ENST00000298428 ADCY10Q96PN6 1610 aa28.04■■■□□ 2.08
SEC61A2-201ENST00000298428 KDM5BQ9UGL1 1544 aa28.01■■■□□ 2.07
SEC61A2-201ENST00000298428 FAM50AQ14320 339 aaKnown RBP28■■■□□ 2.07
SEC61A2-201ENST00000298428 KIF14Q15058 1648 aa27.99■■■□□ 2.07
SEC61A2-201ENST00000298428 ZCCHC11Q5TAX3 1644 aaKnown RBP27.99■■■□□ 2.07
SEC61A2-201ENST00000298428 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.98■■■□□ 2.07
SEC61A2-201ENST00000298428 MIA2Q96PC5 1412 aa27.93■■■□□ 2.06
SEC61A2-201ENST00000298428 PTPN23Q9H3S7 1636 aa27.93■■■□□ 2.06
SEC61A2-201ENST00000298428 ITGAEP38570 1179 aa27.91■■■□□ 2.06
SEC61A2-201ENST00000298428 TCOF1Q13428 1488 aaKnown RBP27.89■■■□□ 2.05
SEC61A2-201ENST00000298428 ABCC10Q5T3U5 1492 aa27.89■■■□□ 2.05
SEC61A2-201ENST00000298428 ITSN2Q9NZM3 1697 aa27.88■■■□□ 2.05
SEC61A2-201ENST00000298428 GPATCH8Q9UKJ3 1502 aaKnown RBP27.86■■■□□ 2.05
SEC61A2-201ENST00000298428 RIMBP3CA6NJZ7 1639 aa27.85■■■□□ 2.05
SEC61A2-201ENST00000298428 RIMBP3BA6NNM3 1639 aa27.85■■■□□ 2.05
SEC61A2-201ENST00000298428 RIMBP3Q9UFD9 1639 aa27.85■■■□□ 2.05
SEC61A2-201ENST00000298428 CDC42BPAQ5VT25 1732 aa27.8■■■□□ 2.04
SEC61A2-201ENST00000298428 CFDP1Q9UEE9 299 aaPredicted RBP27.8■■■□□ 2.04
SEC61A2-201ENST00000298428 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.77■■■□□ 2.04
SEC61A2-201ENST00000298428 KCNH8Q96L42 1107 aa27.76■■■□□ 2.04
SEC61A2-201ENST00000298428 WDR7Q9Y4E6 1490 aa27.76■■■□□ 2.03
SEC61A2-201ENST00000298428 TTC37Q6PGP7 1564 aa27.76■■■□□ 2.03
SEC61A2-201ENST00000298428 NPM1P06748 294 aaKnown RBP eCLIP27.76■■■□□ 2.03
SEC61A2-201ENST00000298428 CAMSAP2Q08AD1 1489 aa27.73■■■□□ 2.03
SEC61A2-201ENST00000298428 ZNF644Q9H582 1327 aaPredicted RBP27.72■■■□□ 2.03
SEC61A2-201ENST00000298428 PREX2Q70Z35 1606 aa27.72■■■□□ 2.03
SEC61A2-201ENST00000298428 HRCP23327 699 aa27.72■■■□□ 2.03
SEC61A2-201ENST00000298428 PTPRKQ15262 1439 aa27.71■■■□□ 2.03
SEC61A2-201ENST00000298428 ASXL2Q76L83 1435 aa27.71■■■□□ 2.03
SEC61A2-201ENST00000298428 CYB5RLQ6IPT4 315 aa27.71■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms