RNA–Protein interactions for RNA: ENST00000296875.3

GDF9-201, Transcript of growth differentiation factor 9, humanhuman

TSL 5 BASIC

Gene GDF9, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDF9-201ENST00000296875 GRIN2BQ13224 1484 aa22.07■■□□□ 1.12
GDF9-201ENST00000296875 ADAMTS12P58397 1594 aa22■■□□□ 1.11
GDF9-201ENST00000296875 TTBK1Q5TCY1 1321 aaPredicted RBP21.97■■□□□ 1.11
GDF9-201ENST00000296875 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.97■■□□□ 1.11
GDF9-201ENST00000296875 ARAP1Q96P48 1450 aa21.97■■□□□ 1.11
GDF9-201ENST00000296875 SNAPC4Q5SXM2 1469 aa21.96■■□□□ 1.11
GDF9-201ENST00000296875 FHAD1B1AJZ9 1412 aa21.95■■□□□ 1.11
GDF9-201ENST00000296875 MAGI1Q96QZ7 1491 aaPredicted RBP21.93■■□□□ 1.1
GDF9-201ENST00000296875 RANGAP1P46060 587 aaPredicted RBP21.87■■□□□ 1.09
GDF9-201ENST00000296875 ARHGAP35Q9NRY4 1499 aa21.85■■□□□ 1.09
GDF9-201ENST00000296875 CTTNBP2Q8WZ74 1663 aa21.84■■□□□ 1.09
GDF9-201ENST00000296875 SYNJ2O15056 1496 aa21.84■■□□□ 1.09
GDF9-201ENST00000296875 MAP3K1Q13233 1512 aa21.83■■□□□ 1.09
GDF9-201ENST00000296875 GRIN2AQ12879 1464 aa21.81■■□□□ 1.08
GDF9-201ENST00000296875 EFCAB5A4FU69 1503 aa21.75■■□□□ 1.07
GDF9-201ENST00000296875 CHD1O14646 1710 aa21.74■■□□□ 1.07
GDF9-201ENST00000296875 HNRNPUL2Q1KMD3 747 aaKnown RBP21.72■■□□□ 1.07
GDF9-201ENST00000296875 CHMP7Q8WUX9 453 aaPredicted RBP21.72■■□□□ 1.07
GDF9-201ENST00000296875 CLSPNQ9HAW4 1339 aa21.72■■□□□ 1.07
GDF9-201ENST00000296875 RRBP1Q9P2E9 1410 aaKnown RBP21.72■■□□□ 1.07
GDF9-201ENST00000296875 CEP170Q5SW79 1584 aa21.71■■□□□ 1.07
GDF9-201ENST00000296875 NUP160Q12769 1436 aa21.7■■□□□ 1.06
GDF9-201ENST00000296875 IQGAP2Q13576 1575 aa21.67■■□□□ 1.06
GDF9-201ENST00000296875 KIAA0586Q9BVV6 1533 aa21.66■■□□□ 1.06
GDF9-201ENST00000296875 TIAM1Q13009 1591 aa21.66■■□□□ 1.06
GDF9-201ENST00000296875 FBLN2P98095 1184 aa21.66■■□□□ 1.06
GDF9-201ENST00000296875 OSCARQ8IYS5 282 aa21.65■■□□□ 1.06
GDF9-201ENST00000296875 CCNB3Q8WWL7 1395 aa21.61■■□□□ 1.05
GDF9-201ENST00000296875 SAMD9Q5K651 1589 aa21.61■■□□□ 1.05
GDF9-201ENST00000296875 KANK4Q5T7N3 995 aaPredicted RBP21.61■■□□□ 1.05
GDF9-201ENST00000296875 FYCO1Q9BQS8 1478 aa21.59■■□□□ 1.05
GDF9-201ENST00000296875 UGGT2Q9NYU1 1516 aa21.58■■□□□ 1.05
GDF9-201ENST00000296875 CFAP43Q8NDM7 1665 aa21.58■■□□□ 1.05
GDF9-201ENST00000296875 FMN1Q68DA7 1419 aa21.56■■□□□ 1.04
GDF9-201ENST00000296875 LRRC9Q6ZRR7 1453 aa21.55■■□□□ 1.04
GDF9-201ENST00000296875 CASKIN1Q8WXD9 1431 aa21.52■■□□□ 1.04
GDF9-201ENST00000296875 PCF11O94913 1555 aaKnown RBP21.51■■□□□ 1.03
GDF9-201ENST00000296875 ZNF316A6NFI3 1004 aaPredicted RBP21.51■■□□□ 1.03
GDF9-201ENST00000296875 DISP1Q96F81 1524 aa21.5■■□□□ 1.03
GDF9-201ENST00000296875 FHOD3Q2V2M9 1422 aa21.49■■□□□ 1.03
GDF9-201ENST00000296875 DIEXFQ68CQ4 756 aaKnown RBP21.49■■□□□ 1.03
GDF9-201ENST00000296875 CLASP1Q7Z460 1538 aa21.49■■□□□ 1.03
GDF9-201ENST00000296875 P3H3Q8IVL6 736 aa21.47■■□□□ 1.03
GDF9-201ENST00000296875 SHROOM2Q13796 1616 aa21.47■■□□□ 1.03
GDF9-201ENST00000296875 KIAA0556O60303 1618 aa21.46■■□□□ 1.03
GDF9-201ENST00000296875 JPH4Q96JJ6 628 aa21.46■■□□□ 1.03
GDF9-201ENST00000296875 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.43■■□□□ 1.02
GDF9-201ENST00000296875 DHX57Q6P158 1386 aaKnown RBP21.42■■□□□ 1.02
GDF9-201ENST00000296875 PRG4Q92954 1404 aaPredicted RBP21.35■■□□□ 1.01
GDF9-201ENST00000296875 ATP1B4Q9UN42 357 aaPredicted RBP21.33■■□□□ 1.01
GDF9-201ENST00000296875 CARMIL2Q6F5E8 1435 aa21.33■■□□□ 1.01
GDF9-201ENST00000296875 ERCC6L2Q5T890 1561 aa21.32■■□□□ 1
GDF9-201ENST00000296875 RIMBP3CA6NJZ7 1639 aa21.32■■□□□ 1
GDF9-201ENST00000296875 RIMBP3BA6NNM3 1639 aa21.32■■□□□ 1
GDF9-201ENST00000296875 RIMBP3Q9UFD9 1639 aa21.32■■□□□ 1
GDF9-201ENST00000296875 PHLDB1Q86UU1 1377 aa21.31■■□□□ 1
GDF9-201ENST00000296875 SETD5Q9C0A6 1442 aa21.31■■□□□ 1
GDF9-201ENST00000296875 CCDC18Q5T9S5 1454 aa21.3■■□□□ 1
GDF9-201ENST00000296875 LRRIQ1Q96JM4 1722 aa21.29■■□□□ 1
GDF9-201ENST00000296875 ARHGEF11O15085 1522 aa21.29■■□□□ 1
GDF9-201ENST00000296875 MTUS2Q5JR59 1369 aa21.29■■□□□ 1
GDF9-201ENST00000296875 CENPBP07199 599 aaPredicted RBP21.28■■□□□ 1
GDF9-201ENST00000296875 RAB3GAP2Q9H2M9 1393 aa21.26■□□□□ 0.99
GDF9-201ENST00000296875 EHBP1L1Q8N3D4 1523 aa21.26■□□□□ 0.99
GDF9-201ENST00000296875 FAM50AQ14320 339 aaKnown RBP21.24■□□□□ 0.99
GDF9-201ENST00000296875 ITGAEP38570 1179 aa21.23■□□□□ 0.99
GDF9-201ENST00000296875 HECW1Q76N89 1606 aa21.23■□□□□ 0.99
GDF9-201ENST00000296875 SUPT6HQ7KZ85 1726 aaKnown RBP21.22■□□□□ 0.99
GDF9-201ENST00000296875 FGD6Q6ZV73 1430 aa21.21■□□□□ 0.99
GDF9-201ENST00000296875 RAPGEF6Q8TEU7 1601 aa21.21■□□□□ 0.99
GDF9-201ENST00000296875 ABCA8O94911 1581 aa21.2■□□□□ 0.98
GDF9-201ENST00000296875 PLB1Q6P1J6 1458 aa21.19■□□□□ 0.98
GDF9-201ENST00000296875 PTPRGP23470 1445 aa21.17■□□□□ 0.98
GDF9-201ENST00000296875 TIMELESSQ9UNS1 1208 aa21.17■□□□□ 0.98
GDF9-201ENST00000296875 NUP153P49790 1475 aaKnown RBP21.17■□□□□ 0.98
GDF9-201ENST00000296875 MYOM3Q5VTT5 1437 aa21.14■□□□□ 0.98
GDF9-201ENST00000296875 EPRSP07814 1512 aaKnown RBP21.13■□□□□ 0.97
GDF9-201ENST00000296875 CYB5RLQ6IPT4 315 aa21.13■□□□□ 0.97
GDF9-201ENST00000296875 NCOA2Q15596 1464 aa21.12■□□□□ 0.97
GDF9-201ENST00000296875 CDK13Q14004 1512 aaKnown RBP21.1■□□□□ 0.97
GDF9-201ENST00000296875 ACIN1Q9UKV3 1341 aaKnown RBP21.1■□□□□ 0.97
GDF9-201ENST00000296875 MAPKBP1O60336 1514 aa21.08■□□□□ 0.97
GDF9-201ENST00000296875 MAGI3Q5TCQ9 1506 aa21.07■□□□□ 0.96
GDF9-201ENST00000296875 UACAQ9BZF9 1416 aa21.07■□□□□ 0.96
GDF9-201ENST00000296875 HFM1A2PYH4 1435 aa21.05■□□□□ 0.96
GDF9-201ENST00000296875 ABCC2Q92887 1545 aa21.04■□□□□ 0.96
GDF9-201ENST00000296875 MIA2Q96PC5 1412 aa21.03■□□□□ 0.96
GDF9-201ENST00000296875 PTPN23Q9H3S7 1636 aa21.03■□□□□ 0.96
GDF9-201ENST00000296875 ATP10BO94823 1461 aa21.02■□□□□ 0.96
GDF9-201ENST00000296875 UHRF1BP1LA0JNW5 1464 aa21.02■□□□□ 0.96
GDF9-201ENST00000296875 TCOF1Q13428 1488 aaKnown RBP21.02■□□□□ 0.96
GDF9-201ENST00000296875 ARID3CA6NKF2 412 aa21■□□□□ 0.95
GDF9-201ENST00000296875 AKNAQ7Z591 1439 aa20.99■□□□□ 0.95
GDF9-201ENST00000296875 CDK11AQ9UQ88 783 aaPredicted RBP20.98■□□□□ 0.95
GDF9-201ENST00000296875 ADCY10Q96PN6 1610 aa20.98■□□□□ 0.95
GDF9-201ENST00000296875 KDM5BQ9UGL1 1544 aa20.94■□□□□ 0.94
GDF9-201ENST00000296875 MIER1Q8N108 512 aa20.92■□□□□ 0.94
GDF9-201ENST00000296875 SCAF1Q9H7N4 1312 aaKnown RBP20.92■□□□□ 0.94
GDF9-201ENST00000296875 ZCCHC11Q5TAX3 1644 aaKnown RBP20.92■□□□□ 0.94
GDF9-201ENST00000296875 TROQ12816 1431 aaPredicted RBP20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms