RNA–Protein interactions for RNA: ENST00000296343.9

RUBCN-202, Transcript of RUN and cysteine rich domain containing beclin 1 interacting protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RUBCN, Length 2,919 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUBCN-202ENST00000296343 DIEXFQ68CQ4 756 aaKnown RBP19.63■□□□□ 0.73
RUBCN-202ENST00000296343 MRC2Q9UBG0 1479 aa19.62■□□□□ 0.73
RUBCN-202ENST00000296343 AQRO60306 1485 aaKnown RBP eCLIP19.6■□□□□ 0.734e-6■■■■□ 19.9
RUBCN-202ENST00000296343 ABCA10Q8WWZ4 1543 aa19.57■□□□□ 0.72
RUBCN-202ENST00000296343 WDR62O43379 1518 aa19.54■□□□□ 0.72
RUBCN-202ENST00000296343 GAPVD1Q14C86 1478 aa19.54■□□□□ 0.72
RUBCN-202ENST00000296343 CCNB3Q8WWL7 1395 aa19.53■□□□□ 0.72
RUBCN-202ENST00000296343 YTHDC1Q96MU7 727 aaKnown RBP19.52■□□□□ 0.72
RUBCN-202ENST00000296343 PHLDB1Q86UU1 1377 aa19.49■□□□□ 0.71
RUBCN-202ENST00000296343 NEUROD1Q13562 356 aa19.48■□□□□ 0.71
RUBCN-202ENST00000296343 ZNF316A6NFI3 1004 aaPredicted RBP19.47■□□□□ 0.71
RUBCN-202ENST00000296343 ZNF608Q9ULD9 1512 aaPredicted RBP19.43■□□□□ 0.7
RUBCN-202ENST00000296343 DHX57Q6P158 1386 aaKnown RBP19.41■□□□□ 0.7
RUBCN-202ENST00000296343 CHIC2Q9UKJ5 165 aa19.4■□□□□ 0.7
RUBCN-202ENST00000296343 FHAD1B1AJZ9 1412 aa19.4■□□□□ 0.7
RUBCN-202ENST00000296343 MTUS2Q5JR59 1369 aa19.39■□□□□ 0.7
RUBCN-202ENST00000296343 PCF11O94913 1555 aaKnown RBP19.39■□□□□ 0.69
RUBCN-202ENST00000296343 LRRC9Q6ZRR7 1453 aa19.39■□□□□ 0.69
RUBCN-202ENST00000296343 SIN3AQ96ST3 1273 aa19.38■□□□□ 0.69
RUBCN-202ENST00000296343 RAB3GAP2Q9H2M9 1393 aa19.37■□□□□ 0.69
RUBCN-202ENST00000296343 TIAM1Q13009 1591 aa19.36■□□□□ 0.69
RUBCN-202ENST00000296343 RRBP1Q9P2E9 1410 aaKnown RBP19.35■□□□□ 0.69
RUBCN-202ENST00000296343 CHMP7Q8WUX9 453 aaPredicted RBP19.34■□□□□ 0.69
RUBCN-202ENST00000296343 MIER1Q8N108 512 aa19.32■□□□□ 0.68
RUBCN-202ENST00000296343 HIRIP3Q9BW71 556 aaPredicted RBP19.32■□□□□ 0.68
RUBCN-202ENST00000296343 RRP7BPQ9NSQ0 103 aa19.28■□□□□ 0.68
RUBCN-202ENST00000296343 ABCA5Q8WWZ7 1642 aa19.26■□□□□ 0.67
RUBCN-202ENST00000296343 IFT140Q96RY7 1462 aa19.26■□□□□ 0.67
RUBCN-202ENST00000296343 FMN1Q68DA7 1419 aa19.26■□□□□ 0.67
RUBCN-202ENST00000296343 CUL7Q14999 1698 aa19.25■□□□□ 0.67
RUBCN-202ENST00000296343 CASKIN1Q8WXD9 1431 aa19.24■□□□□ 0.67
RUBCN-202ENST00000296343 TARBP1Q13395 1621 aaKnown RBP19.24■□□□□ 0.67
RUBCN-202ENST00000296343 SCAF1Q9H7N4 1312 aaKnown RBP19.22■□□□□ 0.67
RUBCN-202ENST00000296343 WDR97A6NE52 1622 aa19.2■□□□□ 0.66
RUBCN-202ENST00000296343 SETD5Q9C0A6 1442 aa19.19■□□□□ 0.66
RUBCN-202ENST00000296343 ZNF777Q9ULD5 760 aaPredicted RBP19.19■□□□□ 0.66
RUBCN-202ENST00000296343 CTTNBP2Q8WZ74 1663 aa19.19■□□□□ 0.66
RUBCN-202ENST00000296343 FYCO1Q9BQS8 1478 aa19.19■□□□□ 0.66
RUBCN-202ENST00000296343 SNAPC4Q5SXM2 1469 aa19.18■□□□□ 0.66
RUBCN-202ENST00000296343 GRIN2BQ13224 1484 aa19.18■□□□□ 0.66
RUBCN-202ENST00000296343 TRIM52Q96A61 297 aa19.17■□□□□ 0.66
RUBCN-202ENST00000296343 EFCAB5A4FU69 1503 aa19.15■□□□□ 0.66
RUBCN-202ENST00000296343 CDK13Q14004 1512 aaKnown RBP19.14■□□□□ 0.65
RUBCN-202ENST00000296343 ZNF644Q9H582 1327 aaPredicted RBP19.14■□□□□ 0.65
RUBCN-202ENST00000296343 FOXD1Q16676 465 aa19.13■□□□□ 0.65
RUBCN-202ENST00000296343 EIF4G3O43432 1585 aaKnown RBP19.12■□□□□ 0.65
RUBCN-202ENST00000296343 FGD6Q6ZV73 1430 aa19.12■□□□□ 0.65
RUBCN-202ENST00000296343 PTPRKQ15262 1439 aa19.11■□□□□ 0.65
RUBCN-202ENST00000296343 NCOA2Q15596 1464 aa19.11■□□□□ 0.65
RUBCN-202ENST00000296343 PBRM1Q86U86 1689 aa19.09■□□□□ 0.65
RUBCN-202ENST00000296343 ACIN1Q9UKV3 1341 aaKnown RBP19.08■□□□□ 0.64
RUBCN-202ENST00000296343 JPH4Q96JJ6 628 aa19.07■□□□□ 0.64
RUBCN-202ENST00000296343 IQGAP2Q13576 1575 aa19.07■□□□□ 0.64
RUBCN-202ENST00000296343 MAP3K1Q13233 1512 aa19.06■□□□□ 0.64
RUBCN-202ENST00000296343 MAGI3Q5TCQ9 1506 aa19.05■□□□□ 0.64
RUBCN-202ENST00000296343 ADAMTS12P58397 1594 aa19.05■□□□□ 0.64
RUBCN-202ENST00000296343 GTF3C3Q9Y5Q9 886 aa19.04■□□□□ 0.64
RUBCN-202ENST00000296343 CFAP43Q8NDM7 1665 aa19.04■□□□□ 0.64
RUBCN-202ENST00000296343 CENPBP07199 599 aaPredicted RBP19.03■□□□□ 0.64
RUBCN-202ENST00000296343 CLSPNQ9HAW4 1339 aa19.03■□□□□ 0.64
RUBCN-202ENST00000296343 SAMD9Q5K651 1589 aa19.02■□□□□ 0.64
RUBCN-202ENST00000296343 DDX10Q13206 875 aaKnown RBP19.02■□□□□ 0.64
RUBCN-202ENST00000296343 LRRIQ1Q96JM4 1722 aa19.02■□□□□ 0.63
RUBCN-202ENST00000296343 MAPKBP1O60336 1514 aa19.01■□□□□ 0.63
RUBCN-202ENST00000296343 MYOM3Q5VTT5 1437 aa19.01■□□□□ 0.63
RUBCN-202ENST00000296343 EPRSP07814 1512 aaKnown RBP19■□□□□ 0.63
RUBCN-202ENST00000296343 GRIN2AQ12879 1464 aa19■□□□□ 0.63
RUBCN-202ENST00000296343 KCNH8Q96L42 1107 aa18.98■□□□□ 0.63
RUBCN-202ENST00000296343 PLB1Q6P1J6 1458 aa18.98■□□□□ 0.63
RUBCN-202ENST00000296343 PRG4Q92954 1404 aaPredicted RBP18.95■□□□□ 0.62
RUBCN-202ENST00000296343 CCDC18Q5T9S5 1454 aa18.95■□□□□ 0.62
RUBCN-202ENST00000296343 KIAA0586Q9BVV6 1533 aa18.94■□□□□ 0.62
RUBCN-202ENST00000296343 CFDP1Q9UEE9 299 aaPredicted RBP18.94■□□□□ 0.62
RUBCN-202ENST00000296343 DISP1Q96F81 1524 aa18.94■□□□□ 0.62
RUBCN-202ENST00000296343 CDK11AQ9UQ88 783 aaPredicted RBP18.94■□□□□ 0.62
RUBCN-202ENST00000296343 TONSLQ96HA7 1378 aa18.92■□□□□ 0.62
RUBCN-202ENST00000296343 CNGB1Q14028 1251 aaPredicted RBP18.91■□□□□ 0.62
RUBCN-202ENST00000296343 NAIPQ13075 1403 aa18.89■□□□□ 0.61
RUBCN-202ENST00000296343 MAGI1Q96QZ7 1491 aaPredicted RBP18.88■□□□□ 0.61
RUBCN-202ENST00000296343 SUPT6HQ7KZ85 1726 aaKnown RBP18.87■□□□□ 0.61
RUBCN-202ENST00000296343 PPP1R15AO75807 674 aaPredicted RBP18.87■□□□□ 0.61
RUBCN-202ENST00000296343 NUP153P49790 1475 aaKnown RBP18.87■□□□□ 0.61
RUBCN-202ENST00000296343 EHBP1L1Q8N3D4 1523 aa18.87■□□□□ 0.61
RUBCN-202ENST00000296343 SYNJ2O15056 1496 aa18.86■□□□□ 0.61
RUBCN-202ENST00000296343 PLEKHD1A6NEE1 506 aa18.86■□□□□ 0.61
RUBCN-202ENST00000296343 CEP170Q5SW79 1584 aa18.86■□□□□ 0.61
RUBCN-202ENST00000296343 ZNF326Q5BKZ1 582 aaKnown RBP18.86■□□□□ 0.61
RUBCN-202ENST00000296343 HECW1Q76N89 1606 aa18.85■□□□□ 0.61
RUBCN-202ENST00000296343 PTPN23Q9H3S7 1636 aa18.85■□□□□ 0.61
RUBCN-202ENST00000296343 HFM1A2PYH4 1435 aa18.84■□□□□ 0.61
RUBCN-202ENST00000296343 MPHOSPH9Q99550 1183 aa18.84■□□□□ 0.61
RUBCN-202ENST00000296343 UGGT2Q9NYU1 1516 aa18.83■□□□□ 0.61
RUBCN-202ENST00000296343 SLC4A1APQ9BWU0 796 aaKnown RBP18.83■□□□□ 0.61
RUBCN-202ENST00000296343 KIAA0556O60303 1618 aa18.83■□□□□ 0.6
RUBCN-202ENST00000296343 CHD1O14646 1710 aa18.82■□□□□ 0.6
RUBCN-202ENST00000296343 HNRNPMP52272 730 aaKnown RBP eCLIP18.8■□□□□ 0.6
RUBCN-202ENST00000296343 CARMIL2Q6F5E8 1435 aa18.8■□□□□ 0.6
RUBCN-202ENST00000296343 OSCARQ8IYS5 282 aa18.79■□□□□ 0.6
RUBCN-202ENST00000296343 UACAQ9BZF9 1416 aa18.78■□□□□ 0.6
RUBCN-202ENST00000296343 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms