RNA–Protein interactions for RNA: ENST00000296122.10

PPP1CB-201, Transcript of protein phosphatase 1 catalytic subunit beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PPP1CB, Length 3,527 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CB-201ENST00000296122 ARHGAP35Q9NRY4 1499 aa19.84■□□□□ 0.77
PPP1CB-201ENST00000296122 WDR62O43379 1518 aa19.84■□□□□ 0.77
PPP1CB-201ENST00000296122 ARAP1Q96P48 1450 aa19.84■□□□□ 0.77
PPP1CB-201ENST00000296122 ABCA5Q8WWZ7 1642 aa19.79■□□□□ 0.76
PPP1CB-201ENST00000296122 TARBP1Q13395 1621 aaKnown RBP19.78■□□□□ 0.76
PPP1CB-201ENST00000296122 FHOD3Q2V2M9 1422 aa19.78■□□□□ 0.76
PPP1CB-201ENST00000296122 ZNF608Q9ULD9 1512 aaPredicted RBP19.77■□□□□ 0.76
PPP1CB-201ENST00000296122 FMN1Q68DA7 1419 aa19.75■□□□□ 0.75
PPP1CB-201ENST00000296122 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.75■□□□□ 0.75
PPP1CB-201ENST00000296122 WDR97A6NE52 1622 aa19.74■□□□□ 0.75
PPP1CB-201ENST00000296122 KANK4Q5T7N3 995 aaPredicted RBP19.72■□□□□ 0.75
PPP1CB-201ENST00000296122 ITGAEP38570 1179 aa19.72■□□□□ 0.75
PPP1CB-201ENST00000296122 EFCAB5A4FU69 1503 aa19.72■□□□□ 0.75
PPP1CB-201ENST00000296122 SNAPC4Q5SXM2 1469 aa19.71■□□□□ 0.75
PPP1CB-201ENST00000296122 FAM50AQ14320 339 aaKnown RBP19.66■□□□□ 0.74
PPP1CB-201ENST00000296122 MTUS2Q5JR59 1369 aa19.66■□□□□ 0.74
PPP1CB-201ENST00000296122 THOC2Q8NI27 1593 aaKnown RBP19.64■□□□□ 0.73
PPP1CB-201ENST00000296122 PBRM1Q86U86 1689 aa19.64■□□□□ 0.73
PPP1CB-201ENST00000296122 MAGI1Q96QZ7 1491 aaPredicted RBP19.63■□□□□ 0.73
PPP1CB-201ENST00000296122 ARID3CA6NKF2 412 aa19.63■□□□□ 0.73
PPP1CB-201ENST00000296122 ADAMTS12P58397 1594 aa19.62■□□□□ 0.73
PPP1CB-201ENST00000296122 CTTNBP2Q8WZ74 1663 aa19.62■□□□□ 0.73
PPP1CB-201ENST00000296122 EIF4G3O43432 1585 aaKnown RBP19.6■□□□□ 0.73
PPP1CB-201ENST00000296122 CASKIN1Q8WXD9 1431 aa19.58■□□□□ 0.73
PPP1CB-201ENST00000296122 CDK11AQ9UQ88 783 aaPredicted RBP19.58■□□□□ 0.73
PPP1CB-201ENST00000296122 GRIN2AQ12879 1464 aa19.58■□□□□ 0.73
PPP1CB-201ENST00000296122 IQGAP2Q13576 1575 aa19.58■□□□□ 0.72
PPP1CB-201ENST00000296122 SYNJ2O15056 1496 aa19.58■□□□□ 0.72
PPP1CB-201ENST00000296122 FYCO1Q9BQS8 1478 aa19.57■□□□□ 0.72
PPP1CB-201ENST00000296122 KIAA0586Q9BVV6 1533 aa19.57■□□□□ 0.72
PPP1CB-201ENST00000296122 CARMIL2Q6F5E8 1435 aa19.56■□□□□ 0.72
PPP1CB-201ENST00000296122 JPH4Q96JJ6 628 aa19.55■□□□□ 0.72
PPP1CB-201ENST00000296122 CCNB3Q8WWL7 1395 aa19.55■□□□□ 0.72
PPP1CB-201ENST00000296122 TIAM1Q13009 1591 aa19.51■□□□□ 0.71
PPP1CB-201ENST00000296122 LRRC9Q6ZRR7 1453 aa19.5■□□□□ 0.71
PPP1CB-201ENST00000296122 PCF11O94913 1555 aaKnown RBP19.5■□□□□ 0.71
PPP1CB-201ENST00000296122 MAP3K1Q13233 1512 aa19.49■□□□□ 0.71
PPP1CB-201ENST00000296122 CCDC18Q5T9S5 1454 aa19.41■□□□□ 0.7
PPP1CB-201ENST00000296122 SAMD9Q5K651 1589 aa19.4■□□□□ 0.7
PPP1CB-201ENST00000296122 UGGT2Q9NYU1 1516 aa19.4■□□□□ 0.7
PPP1CB-201ENST00000296122 RRBP1Q9P2E9 1410 aaKnown RBP19.39■□□□□ 0.69
PPP1CB-201ENST00000296122 PHLDB1Q86UU1 1377 aa19.37■□□□□ 0.69
PPP1CB-201ENST00000296122 PLEKHD1A6NEE1 506 aa19.35■□□□□ 0.69
PPP1CB-201ENST00000296122 HECW1Q76N89 1606 aa19.35■□□□□ 0.69
PPP1CB-201ENST00000296122 NUP160Q12769 1436 aa19.34■□□□□ 0.69
PPP1CB-201ENST00000296122 PTPRGP23470 1445 aa19.3■□□□□ 0.68
PPP1CB-201ENST00000296122 PRG4Q92954 1404 aaPredicted RBP19.3■□□□□ 0.68
PPP1CB-201ENST00000296122 KIAA0556O60303 1618 aa19.29■□□□□ 0.68
PPP1CB-201ENST00000296122 CFAP43Q8NDM7 1665 aa19.29■□□□□ 0.68
PPP1CB-201ENST00000296122 EPRSP07814 1512 aaKnown RBP19.29■□□□□ 0.68
PPP1CB-201ENST00000296122 CEP170Q5SW79 1584 aa19.28■□□□□ 0.68
PPP1CB-201ENST00000296122 EHBP1L1Q8N3D4 1523 aa19.28■□□□□ 0.68
PPP1CB-201ENST00000296122 DISP1Q96F81 1524 aa19.27■□□□□ 0.68
PPP1CB-201ENST00000296122 NCOA2Q15596 1464 aa19.27■□□□□ 0.68
PPP1CB-201ENST00000296122 ZNF777Q9ULD5 760 aaPredicted RBP19.26■□□□□ 0.67
PPP1CB-201ENST00000296122 FGD6Q6ZV73 1430 aa19.26■□□□□ 0.67
PPP1CB-201ENST00000296122 MYOM3Q5VTT5 1437 aa19.24■□□□□ 0.67
PPP1CB-201ENST00000296122 CDK13Q14004 1512 aaKnown RBP19.23■□□□□ 0.67
PPP1CB-201ENST00000296122 CFDP1Q9UEE9 299 aaPredicted RBP19.22■□□□□ 0.67
PPP1CB-201ENST00000296122 CHIC2Q9UKJ5 165 aa19.22■□□□□ 0.67
PPP1CB-201ENST00000296122 SETD5Q9C0A6 1442 aa19.21■□□□□ 0.67
PPP1CB-201ENST00000296122 SUPT6HQ7KZ85 1726 aaKnown RBP19.2■□□□□ 0.66
PPP1CB-201ENST00000296122 CLSPNQ9HAW4 1339 aa19.2■□□□□ 0.66
PPP1CB-201ENST00000296122 PLB1Q6P1J6 1458 aa19.2■□□□□ 0.66
PPP1CB-201ENST00000296122 RAB3GAP2Q9H2M9 1393 aa19.18■□□□□ 0.66
PPP1CB-201ENST00000296122 TRIM52Q96A61 297 aa19.18■□□□□ 0.66
PPP1CB-201ENST00000296122 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.17■□□□□ 0.662e-7■■■□□ 17.8
PPP1CB-201ENST00000296122 RAPGEF6Q8TEU7 1601 aa19.17■□□□□ 0.66
PPP1CB-201ENST00000296122 RRP7BPQ9NSQ0 103 aa19.14■□□□□ 0.66
PPP1CB-201ENST00000296122 NUP153P49790 1475 aaKnown RBP19.14■□□□□ 0.66
PPP1CB-201ENST00000296122 TROQ12816 1431 aaPredicted RBP19.13■□□□□ 0.65
PPP1CB-201ENST00000296122 OSCARQ8IYS5 282 aa19.12■□□□□ 0.65
PPP1CB-201ENST00000296122 KCNH8Q96L42 1107 aa19.11■□□□□ 0.65
PPP1CB-201ENST00000296122 DHX57Q6P158 1386 aaKnown RBP19.1■□□□□ 0.65
PPP1CB-201ENST00000296122 NPM1P06748 294 aaKnown RBP eCLIP19.09■□□□□ 0.65
PPP1CB-201ENST00000296122 NEUROD1Q13562 356 aa19.09■□□□□ 0.65
PPP1CB-201ENST00000296122 CHD1O14646 1710 aa19.09■□□□□ 0.65
PPP1CB-201ENST00000296122 MIA2Q96PC5 1412 aa19.09■□□□□ 0.65
PPP1CB-201ENST00000296122 UACAQ9BZF9 1416 aa19.07■□□□□ 0.64
PPP1CB-201ENST00000296122 TSPY4P0CV99 314 aa19.07■□□□□ 0.64
PPP1CB-201ENST00000296122 TSPY10P0CW01 314 aa19.07■□□□□ 0.64
PPP1CB-201ENST00000296122 ACIN1Q9UKV3 1341 aaKnown RBP19.03■□□□□ 0.64
PPP1CB-201ENST00000296122 MAGI3Q5TCQ9 1506 aa19.02■□□□□ 0.63
PPP1CB-201ENST00000296122 PTPN23Q9H3S7 1636 aa19.01■□□□□ 0.63
PPP1CB-201ENST00000296122 ZNF316A6NFI3 1004 aaPredicted RBP19■□□□□ 0.63
PPP1CB-201ENST00000296122 ATP10BO94823 1461 aa18.99■□□□□ 0.63
PPP1CB-201ENST00000296122 ZNF644Q9H582 1327 aaPredicted RBP18.99■□□□□ 0.63
PPP1CB-201ENST00000296122 MYT1LQ9UL68 1186 aa18.98■□□□□ 0.63
PPP1CB-201ENST00000296122 HFM1A2PYH4 1435 aa18.95■□□□□ 0.62
PPP1CB-201ENST00000296122 ABCA8O94911 1581 aa18.95■□□□□ 0.62
PPP1CB-201ENST00000296122 LRRIQ1Q96JM4 1722 aa18.94■□□□□ 0.62
PPP1CB-201ENST00000296122 KIF14Q15058 1648 aa18.93■□□□□ 0.62
PPP1CB-201ENST00000296122 DIEXFQ68CQ4 756 aaKnown RBP18.92■□□□□ 0.62
PPP1CB-201ENST00000296122 TONSLQ96HA7 1378 aa18.92■□□□□ 0.62
PPP1CB-201ENST00000296122 TCOF1Q13428 1488 aaKnown RBP18.91■□□□□ 0.62
PPP1CB-201ENST00000296122 ARHGEF11O15085 1522 aa18.91■□□□□ 0.62
PPP1CB-201ENST00000296122 ANKRD30AQ9BXX3 1397 aa18.91■□□□□ 0.62
PPP1CB-201ENST00000296122 SIN3AQ96ST3 1273 aa18.9■□□□□ 0.62
PPP1CB-201ENST00000296122 RSPH4AQ5TD94 716 aa18.9■□□□□ 0.62
PPP1CB-201ENST00000296122 EFCAB2Q5VUJ9 269 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms