RNA–Protein interactions for RNA: ENST00000295971.11

RBM47-201, Transcript of RNA binding motif protein 47, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene RBM47, Length 4,056 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM47-201ENST00000295971 RAB3GAP2Q9H2M9 1393 aa18.5■□□□□ 0.55
RBM47-201ENST00000295971 DHX57Q6P158 1386 aaKnown RBP18.49■□□□□ 0.55
RBM47-201ENST00000295971 MRS2Q9HD23 443 aa18.48■□□□□ 0.55
RBM47-201ENST00000295971 DAXXQ9UER7 740 aaPredicted RBP18.47■□□□□ 0.55
RBM47-201ENST00000295971 EIF4G2P78344 907 aaKnown RBP eCLIP18.46■□□□□ 0.55
RBM47-201ENST00000295971 SETD5Q9C0A6 1442 aa18.45■□□□□ 0.54
RBM47-201ENST00000295971 FHAD1B1AJZ9 1412 aa18.44■□□□□ 0.54
RBM47-201ENST00000295971 RTL5Q5HYW3 569 aaPredicted RBP18.43■□□□□ 0.54
RBM47-201ENST00000295971 KCNH8Q96L42 1107 aa18.4■□□□□ 0.54
RBM47-201ENST00000295971 SLC4A1APQ9BWU0 796 aaKnown RBP18.4■□□□□ 0.54
RBM47-201ENST00000295971 SALL2Q9Y467 1007 aaPredicted RBP18.38■□□□□ 0.53
RBM47-201ENST00000295971 SENP3-EIF4A1A0A087X0R7 540 aa18.38■□□□□ 0.53
RBM47-201ENST00000295971 KDM2AQ9Y2K7 1162 aa18.34■□□□□ 0.53
RBM47-201ENST00000295971 TIMELESSQ9UNS1 1208 aa18.33■□□□□ 0.53
RBM47-201ENST00000295971 KIF21BO75037 1637 aa18.32■□□□□ 0.52
RBM47-201ENST00000295971 SYNJ1O43426 1573 aa18.32■□□□□ 0.52
RBM47-201ENST00000295971 TMC1Q8TDI8 760 aa18.32■□□□□ 0.52
RBM47-201ENST00000295971 PPP1R15AO75807 674 aaPredicted RBP18.3■□□□□ 0.52
RBM47-201ENST00000295971 ARHGAP35Q9NRY4 1499 aa18.3■□□□□ 0.52
RBM47-201ENST00000295971 FHOD3Q2V2M9 1422 aa18.28■□□□□ 0.52
RBM47-201ENST00000295971 NPM2Q86SE8 214 aaKnown RBP18.28■□□□□ 0.52
RBM47-201ENST00000295971 CCDC136Q96JN2 1154 aa18.28■□□□□ 0.52
RBM47-201ENST00000295971 ANP32AP39687 249 aaKnown RBP18.27■□□□□ 0.51
RBM47-201ENST00000295971 ANP32EQ9BTT0 268 aa18.26■□□□□ 0.51
RBM47-201ENST00000295971 CCER2I3L3R5 266 aa18.25■□□□□ 0.51
RBM47-201ENST00000295971 TDRD9Q8NDG6 1382 aaKnown RBP18.24■□□□□ 0.51
RBM47-201ENST00000295971 TSPY4P0CV99 314 aa18.24■□□□□ 0.51
RBM47-201ENST00000295971 TSPY10P0CW01 314 aa18.24■□□□□ 0.51
RBM47-201ENST00000295971 FOXD1Q16676 465 aa18.24■□□□□ 0.51
RBM47-201ENST00000295971 CADPSQ9ULU8 1353 aa18.24■□□□□ 0.51
RBM47-201ENST00000295971 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.23■□□□□ 0.51
RBM47-201ENST00000295971 CHMP7Q8WUX9 453 aaPredicted RBP18.23■□□□□ 0.51
RBM47-201ENST00000295971 TSHZ2Q9NRE2 1034 aa18.23■□□□□ 0.51
RBM47-201ENST00000295971 HSPA5P11021 654 aaKnown RBP18.21■□□□□ 0.51
RBM47-201ENST00000295971 CFDP1Q9UEE9 299 aaPredicted RBP18.2■□□□□ 0.5
RBM47-201ENST00000295971 ARAP1Q96P48 1450 aa18.2■□□□□ 0.5
RBM47-201ENST00000295971 IGF1RP08069 1367 aa18.2■□□□□ 0.5
RBM47-201ENST00000295971 EIF4G1Q04637 1599 aaKnown RBP18.17■□□□□ 0.5
RBM47-201ENST00000295971 NBR1Q14596 966 aa18.15■□□□□ 0.5
RBM47-201ENST00000295971 FMN1Q68DA7 1419 aa18.15■□□□□ 0.5
RBM47-201ENST00000295971 RBM19Q9Y4C8 960 aaKnown RBP18.14■□□□□ 0.49
RBM47-201ENST00000295971 B4GALNT3Q6L9W6 998 aa18.13■□□□□ 0.49
RBM47-201ENST00000295971 RGL3Q3MIN7 710 aa18.13■□□□□ 0.49
RBM47-201ENST00000295971 PHLDB1Q86UU1 1377 aa18.12■□□□□ 0.49
RBM47-201ENST00000295971 PLEKHD1A6NEE1 506 aa18.11■□□□□ 0.49
RBM47-201ENST00000295971 PPP4R2Q9NY27 417 aa18.1■□□□□ 0.49
RBM47-201ENST00000295971 PRXQ9BXM0 1461 aa18.1■□□□□ 0.49
RBM47-201ENST00000295971 MPHOSPH9Q99550 1183 aa18.09■□□□□ 0.49
RBM47-201ENST00000295971 CARD11Q9BXL7 1154 aa18.09■□□□□ 0.49
RBM47-201ENST00000295971 L3MBTL2Q969R5 705 aa18.07■□□□□ 0.48
RBM47-201ENST00000295971 CANXP27824 592 aaKnown RBP18.06■□□□□ 0.48
RBM47-201ENST00000295971 FGD5Q6ZNL6 1462 aa18.06■□□□□ 0.48
RBM47-201ENST00000295971 RRBP1Q9P2E9 1410 aaKnown RBP18.05■□□□□ 0.48
RBM47-201ENST00000295971 ERICH3Q5RHP9 1530 aa18.04■□□□□ 0.48
RBM47-201ENST00000295971 ZBTB47Q9UFB7 747 aaPredicted RBP18.04■□□□□ 0.48
RBM47-201ENST00000295971 NCAPD3P42695 1498 aa18.04■□□□□ 0.48
RBM47-201ENST00000295971 TOP2BQ02880 1626 aa18.02■□□□□ 0.47
RBM47-201ENST00000295971 FANCD2Q9BXW9 1451 aa18.01■□□□□ 0.47
RBM47-201ENST00000295971 LRRC9Q6ZRR7 1453 aa18.01■□□□□ 0.47
RBM47-201ENST00000295971 RAD54L2Q9Y4B4 1467 aa17.99■□□□□ 0.47
RBM47-201ENST00000295971 CHGAP10645 457 aaKnown RBP17.98■□□□□ 0.47
RBM47-201ENST00000295971 PKD2Q13563 968 aa17.97■□□□□ 0.47
RBM47-201ENST00000295971 CCDC18Q5T9S5 1454 aa17.97■□□□□ 0.47
RBM47-201ENST00000295971 CUX1P39880 1505 aa17.97■□□□□ 0.47
RBM47-201ENST00000295971 BICRAQ9NZM4 1560 aa17.96■□□□□ 0.47
RBM47-201ENST00000295971 DCAF11Q8TEB1 546 aa17.96■□□□□ 0.47
RBM47-201ENST00000295971 WDR43Q15061 677 aaKnown RBP eCLIP17.95■□□□□ 0.46
RBM47-201ENST00000295971 CFTRP13569 1480 aa17.95■□□□□ 0.46
RBM47-201ENST00000295971 PDS5BQ9NTI5 1447 aa17.93■□□□□ 0.46
RBM47-201ENST00000295971 FGD6Q6ZV73 1430 aa17.92■□□□□ 0.46
RBM47-201ENST00000295971 BCL11AQ9H165 835 aa17.89■□□□□ 0.46
RBM47-201ENST00000295971 CC2D1BQ5T0F9 858 aaKnown RBP17.88■□□□□ 0.45
RBM47-201ENST00000295971 PRKRIP1Q9H875 184 aaPredicted RBP17.86■□□□□ 0.45
RBM47-201ENST00000295971 UACAQ9BZF9 1416 aa17.83■□□□□ 0.45
RBM47-201ENST00000295971 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.83■□□□□ 0.45
RBM47-201ENST00000295971 NUP155O75694 1391 aa17.83■□□□□ 0.44
RBM47-201ENST00000295971 NOP58Q9Y2X3 529 aaKnown RBP17.82■□□□□ 0.44
RBM47-201ENST00000295971 CASKIN1Q8WXD9 1431 aa17.82■□□□□ 0.44
RBM47-201ENST00000295971 ERICH6BQ5W0A0 696 aa17.81■□□□□ 0.44
RBM47-201ENST00000295971 MYOM3Q5VTT5 1437 aa17.81■□□□□ 0.44
RBM47-201ENST00000295971 KNSTRNQ9Y448 316 aa17.81■□□□□ 0.44
RBM47-201ENST00000295971 TIAM1Q13009 1591 aa17.81■□□□□ 0.44
RBM47-201ENST00000295971 WDR97A6NE52 1622 aa17.81■□□□□ 0.44
RBM47-201ENST00000295971 ZNF644Q9H582 1327 aaPredicted RBP17.79■□□□□ 0.44
RBM47-201ENST00000295971 UNC13AQ9UPW8 1703 aa17.79■□□□□ 0.44
RBM47-201ENST00000295971 WASHC2AQ641Q2 1341 aa17.79■□□□□ 0.44
RBM47-201ENST00000295971 GAPVD1Q14C86 1478 aa17.78■□□□□ 0.44
RBM47-201ENST00000295971 SENP3Q9H4L4 574 aaPredicted RBP17.78■□□□□ 0.44
RBM47-201ENST00000295971 PEG3Q9GZU2 1588 aa17.78■□□□□ 0.44
RBM47-201ENST00000295971 ERCC6Q03468 1493 aa17.77■□□□□ 0.43
RBM47-201ENST00000295971 NCOA2Q15596 1464 aa17.76■□□□□ 0.43
RBM47-201ENST00000295971 HMGXB3Q12766 1538 aa17.76■□□□□ 0.43
RBM47-201ENST00000295971 ANKRD30AQ9BXX3 1397 aa17.75■□□□□ 0.43
RBM47-201ENST00000295971 NUDCQ9Y266 331 aa17.75■□□□□ 0.43
RBM47-201ENST00000295971 LAS1LQ9Y4W2 734 aaKnown RBP17.74■□□□□ 0.43
RBM47-201ENST00000295971 FYCO1Q9BQS8 1478 aa17.74■□□□□ 0.43
RBM47-201ENST00000295971 HNRNPMP52272 730 aaKnown RBP eCLIP17.73■□□□□ 0.43
RBM47-201ENST00000295971 NESP48681 1621 aa17.72■□□□□ 0.43
RBM47-201ENST00000295971 ST20-MTHFSA0A0A6YYL1 179 aa17.72■□□□□ 0.43
RBM47-201ENST00000295971 NEFMP07197 916 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms