RNA–Protein interactions for RNA: ENST00000292303.4

CCR5-201, Transcript of C-C motif chemokine receptor 5 (gene/pseudogene), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCR5, Length 3,450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCR5-201ENST00000292303 KANK4Q5T7N3 995 aaPredicted RBP8.6□□□□□ -1.03
CCR5-201ENST00000292303 ERICH3Q5RHP9 1530 aa8.58□□□□□ -1.04
CCR5-201ENST00000292303 ARID3CA6NKF2 412 aa8.57□□□□□ -1.04
CCR5-201ENST00000292303 ZNF316A6NFI3 1004 aaPredicted RBP8.56□□□□□ -1.04
CCR5-201ENST00000292303 THOC2Q8NI27 1593 aaKnown RBP8.56□□□□□ -1.04
CCR5-201ENST00000292303 KIF27Q86VH2 1401 aa8.56□□□□□ -1.04
CCR5-201ENST00000292303 ANP32EQ9BTT0 268 aa8.56□□□□□ -1.04
CCR5-201ENST00000292303 CNGB1Q14028 1251 aaPredicted RBP8.55□□□□□ -1.04
CCR5-201ENST00000292303 ERICH6Q7L0X2 663 aa8.54□□□□□ -1.04
CCR5-201ENST00000292303 ARHGAP35Q9NRY4 1499 aa8.53□□□□□ -1.04
CCR5-201ENST00000292303 MAPK8IP2Q13387 824 aaPredicted RBP8.52□□□□□ -1.05
CCR5-201ENST00000292303 IGF1RP08069 1367 aa8.52□□□□□ -1.05
CCR5-201ENST00000292303 CADPSQ9ULU8 1353 aa8.51□□□□□ -1.05
CCR5-201ENST00000292303 WDR97A6NE52 1622 aa8.5□□□□□ -1.05
CCR5-201ENST00000292303 MIER1Q8N108 512 aa8.49□□□□□ -1.05
CCR5-201ENST00000292303 FGD5Q6ZNL6 1462 aa8.49□□□□□ -1.05
CCR5-201ENST00000292303 DHX57Q6P158 1386 aaKnown RBP8.49□□□□□ -1.05
CCR5-201ENST00000292303 WDR62O43379 1518 aa8.47□□□□□ -1.05
CCR5-201ENST00000292303 NCBP3Q53F19 620 aaKnown RBP8.47□□□□□ -1.05
CCR5-201ENST00000292303 HIRIP3Q9BW71 556 aaPredicted RBP8.47□□□□□ -1.05
CCR5-201ENST00000292303 RRBP1Q9P2E9 1410 aaKnown RBP8.46□□□□□ -1.05
CCR5-201ENST00000292303 CARMIL1Q5VZK9 1371 aa8.46□□□□□ -1.06
CCR5-201ENST00000292303 FAM50AQ14320 339 aaKnown RBP8.45□□□□□ -1.06
CCR5-201ENST00000292303 NESP48681 1621 aa8.44□□□□□ -1.06
CCR5-201ENST00000292303 ANO8Q9HCE9 1232 aaPredicted RBP8.44□□□□□ -1.06
CCR5-201ENST00000292303 RAD54L2Q9Y4B4 1467 aa8.44□□□□□ -1.06
CCR5-201ENST00000292303 BCANQ96GW7 911 aa8.44□□□□□ -1.06
CCR5-201ENST00000292303 FANCD2Q9BXW9 1451 aa8.43□□□□□ -1.06
CCR5-201ENST00000292303 CCNB3Q8WWL7 1395 aa8.43□□□□□ -1.06
CCR5-201ENST00000292303 CCDC136Q96JN2 1154 aa8.43□□□□□ -1.06
CCR5-201ENST00000292303 PDS5BQ9NTI5 1447 aa8.42□□□□□ -1.06
CCR5-201ENST00000292303 TIAM1Q13009 1591 aa8.41□□□□□ -1.06
CCR5-201ENST00000292303 KIF21AQ7Z4S6 1674 aa8.4□□□□□ -1.07
CCR5-201ENST00000292303 PHLDB1Q86UU1 1377 aa8.39□□□□□ -1.07
CCR5-201ENST00000292303 POLA1P09884 1462 aaPredicted RBP8.39□□□□□ -1.07
CCR5-201ENST00000292303 CLSPNQ9HAW4 1339 aa8.39□□□□□ -1.07
CCR5-201ENST00000292303 TOPBP1Q92547 1522 aa8.38□□□□□ -1.07
CCR5-201ENST00000292303 MRC2Q9UBG0 1479 aa8.38□□□□□ -1.07
CCR5-201ENST00000292303 LRRC9Q6ZRR7 1453 aa8.38□□□□□ -1.07
CCR5-201ENST00000292303 RAB3GAP2Q9H2M9 1393 aa8.38□□□□□ -1.07
CCR5-201ENST00000292303 FHOD3Q2V2M9 1422 aa8.37□□□□□ -1.07
CCR5-201ENST00000292303 PCF11O94913 1555 aaKnown RBP8.37□□□□□ -1.07
CCR5-201ENST00000292303 DNMBPQ6XZF7 1577 aa8.37□□□□□ -1.07
CCR5-201ENST00000292303 ERCC6Q03468 1493 aa8.36□□□□□ -1.07
CCR5-201ENST00000292303 ABCA10Q8WWZ4 1543 aa8.36□□□□□ -1.07
CCR5-201ENST00000292303 SENP3-EIF4A1A0A087X0R7 540 aa8.36□□□□□ -1.07
CCR5-201ENST00000292303 DNAJC5Q9H3Z4 198 aa8.36□□□□□ -1.07
CCR5-201ENST00000292303 MAPKBP1O60336 1514 aa8.35□□□□□ -1.07
CCR5-201ENST00000292303 MAP3K1Q13233 1512 aa8.35□□□□□ -1.07
CCR5-201ENST00000292303 CNKSR2Q8WXI2 1034 aa8.34□□□□□ -1.07
CCR5-201ENST00000292303 URB2Q14146 1524 aaKnown RBP8.34□□□□□ -1.07
CCR5-201ENST00000292303 POLR3GLQ9BT43 218 aa8.34□□□□□ -1.07
CCR5-201ENST00000292303 TSHZ2Q9NRE2 1034 aa8.34□□□□□ -1.07
CCR5-201ENST00000292303 CFAP43Q8NDM7 1665 aa8.33□□□□□ -1.08
CCR5-201ENST00000292303 NPM3O75607 178 aaKnown RBP8.33□□□□□ -1.08
CCR5-201ENST00000292303 SIN3AQ96ST3 1273 aa8.33□□□□□ -1.08
CCR5-201ENST00000292303 TDRD9Q8NDG6 1382 aaKnown RBP8.33□□□□□ -1.08
CCR5-201ENST00000292303 FHAD1B1AJZ9 1412 aa8.32□□□□□ -1.08
CCR5-201ENST00000292303 SETD5Q9C0A6 1442 aa8.32□□□□□ -1.08
CCR5-201ENST00000292303 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.32□□□□□ -1.08
CCR5-201ENST00000292303 CTTNBP2Q8WZ74 1663 aa8.31□□□□□ -1.08
CCR5-201ENST00000292303 RTN4Q9NQC3 1192 aaKnown RBP8.31□□□□□ -1.08
CCR5-201ENST00000292303 FBLN2P98095 1184 aa8.31□□□□□ -1.08
CCR5-201ENST00000292303 LRRIQ1Q96JM4 1722 aa8.3□□□□□ -1.08
CCR5-201ENST00000292303 CHIC2Q9UKJ5 165 aa8.3□□□□□ -1.08
CCR5-201ENST00000292303 CUL7Q14999 1698 aa8.29□□□□□ -1.08
CCR5-201ENST00000292303 CASKIN1Q8WXD9 1431 aa8.29□□□□□ -1.08
CCR5-201ENST00000292303 KCNH8Q96L42 1107 aa8.28□□□□□ -1.08
CCR5-201ENST00000292303 FYCO1Q9BQS8 1478 aa8.28□□□□□ -1.08
CCR5-201ENST00000292303 SNAPC4Q5SXM2 1469 aa8.27□□□□□ -1.08
CCR5-201ENST00000292303 EFCAB5A4FU69 1503 aa8.27□□□□□ -1.09
CCR5-201ENST00000292303 ABCA5Q8WWZ7 1642 aa8.27□□□□□ -1.09
CCR5-201ENST00000292303 SALL2Q9Y467 1007 aaPredicted RBP8.27□□□□□ -1.09
CCR5-201ENST00000292303 SLC4A1APQ9BWU0 796 aaKnown RBP8.27□□□□□ -1.09
CCR5-201ENST00000292303 SUPT16HQ9Y5B9 1047 aaKnown RBP8.26□□□□□ -1.09
CCR5-201ENST00000292303 PTPRKQ15262 1439 aa8.26□□□□□ -1.09
CCR5-201ENST00000292303 DDX10Q13206 875 aaKnown RBP8.26□□□□□ -1.09
CCR5-201ENST00000292303 GAPVD1Q14C86 1478 aa8.26□□□□□ -1.09
CCR5-201ENST00000292303 AQRO60306 1485 aaKnown RBP eCLIP8.26□□□□□ -1.09
CCR5-201ENST00000292303 DCAF8L1A6NGE4 600 aa8.25□□□□□ -1.09
CCR5-201ENST00000292303 SAMD9Q5K651 1589 aa8.24□□□□□ -1.09
CCR5-201ENST00000292303 TRIM52Q96A61 297 aa8.24□□□□□ -1.09
CCR5-201ENST00000292303 ZNF326Q5BKZ1 582 aaKnown RBP8.24□□□□□ -1.09
CCR5-201ENST00000292303 FMN1Q68DA7 1419 aa8.24□□□□□ -1.09
CCR5-201ENST00000292303 FGD6Q6ZV73 1430 aa8.24□□□□□ -1.09
CCR5-201ENST00000292303 EIF5BO60841 1220 aaKnown RBP8.23□□□□□ -1.09
CCR5-201ENST00000292303 MTUS2Q5JR59 1369 aa8.22□□□□□ -1.09
CCR5-201ENST00000292303 TARBP1Q13395 1621 aaKnown RBP8.22□□□□□ -1.09
CCR5-201ENST00000292303 GRIN2BQ13224 1484 aa8.22□□□□□ -1.09
CCR5-201ENST00000292303 IFT140Q96RY7 1462 aa8.22□□□□□ -1.09
CCR5-201ENST00000292303 MAGI3Q5TCQ9 1506 aa8.21□□□□□ -1.09
CCR5-201ENST00000292303 NCOA2Q15596 1464 aa8.21□□□□□ -1.1
CCR5-201ENST00000292303 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.21□□□□□ -1.1
CCR5-201ENST00000292303 PPP1R15AO75807 674 aaPredicted RBP8.2□□□□□ -1.1
CCR5-201ENST00000292303 RRP7BPQ9NSQ0 103 aa8.2□□□□□ -1.1
CCR5-201ENST00000292303 ZNF777Q9ULD5 760 aaPredicted RBP8.19□□□□□ -1.1
CCR5-201ENST00000292303 CCDC18Q5T9S5 1454 aa8.19□□□□□ -1.1
CCR5-201ENST00000292303 NBR1Q14596 966 aa8.18□□□□□ -1.1
CCR5-201ENST00000292303 DMRT2Q9Y5R5 561 aa8.18□□□□□ -1.1
CCR5-201ENST00000292303 PTPN23Q9H3S7 1636 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms