RNA–Protein interactions for RNA: ENST00000288839.6

SSX2B-201, Transcript of SSX family member 2B, humanhuman

TSL 3

Gene SSX2B, Length 801 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2B-201ENST00000288839 RNF216Q9NWF9 866 aaPredicted RBP11.76□□□□□ -0.53
SSX2B-201ENST00000288839 GAPVD1Q14C86 1478 aa11.76□□□□□ -0.53
SSX2B-201ENST00000288839 MAGI1Q96QZ7 1491 aaPredicted RBP11.75□□□□□ -0.53
SSX2B-201ENST00000288839 NPM3O75607 178 aaKnown RBP11.74□□□□□ -0.53
SSX2B-201ENST00000288839 CLASP1Q7Z460 1538 aa11.74□□□□□ -0.53
SSX2B-201ENST00000288839 ADAMTS12P58397 1594 aa11.72□□□□□ -0.53
SSX2B-201ENST00000288839 SYNJ2O15056 1496 aa11.72□□□□□ -0.53
SSX2B-201ENST00000288839 DCAF8L1A6NGE4 600 aa11.72□□□□□ -0.53
SSX2B-201ENST00000288839 ARAP1Q96P48 1450 aa11.71□□□□□ -0.53
SSX2B-201ENST00000288839 RNF39Q9H2S5 420 aa11.68□□□□□ -0.54
SSX2B-201ENST00000288839 CHMP7Q8WUX9 453 aaPredicted RBP11.67□□□□□ -0.54
SSX2B-201ENST00000288839 CEP170Q5SW79 1584 aa11.66□□□□□ -0.54
SSX2B-201ENST00000288839 GRIN2AQ12879 1464 aa11.65□□□□□ -0.54
SSX2B-201ENST00000288839 ERCC6L2Q5T890 1561 aa11.65□□□□□ -0.54
SSX2B-201ENST00000288839 CYB5RLQ6IPT4 315 aa11.63□□□□□ -0.55
SSX2B-201ENST00000288839 ERICH3Q5RHP9 1530 aa11.61□□□□□ -0.55
SSX2B-201ENST00000288839 FHAD1B1AJZ9 1412 aa11.6□□□□□ -0.55
SSX2B-201ENST00000288839 NUP160Q12769 1436 aa11.6□□□□□ -0.55
SSX2B-201ENST00000288839 KIF27Q86VH2 1401 aa11.58□□□□□ -0.56
SSX2B-201ENST00000288839 RUSC2Q8N2Y8 1516 aa11.56□□□□□ -0.56
SSX2B-201ENST00000288839 SHROOM2Q13796 1616 aa11.55□□□□□ -0.56
SSX2B-201ENST00000288839 IGF1RP08069 1367 aa11.54□□□□□ -0.56
SSX2B-201ENST00000288839 CUL7Q14999 1698 aa11.5□□□□□ -0.57
SSX2B-201ENST00000288839 C1QBPQ07021 282 aaKnown RBP11.49□□□□□ -0.57
SSX2B-201ENST00000288839 PRG4Q92954 1404 aaPredicted RBP11.47□□□□□ -0.57
SSX2B-201ENST00000288839 CARMIL1Q5VZK9 1371 aa11.47□□□□□ -0.57
SSX2B-201ENST00000288839 FAM9AQ8IZU1 332 aaPredicted RBP11.44□□□□□ -0.58
SSX2B-201ENST00000288839 TRHP20396 242 aaPredicted RBP11.43□□□□□ -0.58
SSX2B-201ENST00000288839 KIAA0586Q9BVV6 1533 aa11.4□□□□□ -0.58
SSX2B-201ENST00000288839 RAPGEF2Q9Y4G8 1499 aa11.4□□□□□ -0.58
SSX2B-201ENST00000288839 CSRNP3Q8WYN3 585 aa11.4□□□□□ -0.58
SSX2B-201ENST00000288839 JPH4Q96JJ6 628 aa11.39□□□□□ -0.59
SSX2B-201ENST00000288839 EEA1Q15075 1411 aa11.38□□□□□ -0.59
SSX2B-201ENST00000288839 ADCY10Q96PN6 1610 aa11.38□□□□□ -0.59
SSX2B-201ENST00000288839 PRXQ9BXM0 1461 aa11.38□□□□□ -0.59
SSX2B-201ENST00000288839 IQGAP2Q13576 1575 aa11.37□□□□□ -0.59
SSX2B-201ENST00000288839 TTBK1Q5TCY1 1321 aaPredicted RBP11.35□□□□□ -0.59
SSX2B-201ENST00000288839 EHMT2Q96KQ7 1210 aa11.33□□□□□ -0.6
SSX2B-201ENST00000288839 DISP1Q96F81 1524 aa11.33□□□□□ -0.6
SSX2B-201ENST00000288839 KIF13AQ9H1H9 1805 aa11.32□□□□□ -0.6
SSX2B-201ENST00000288839 CTTNBP2Q8WZ74 1663 aa11.3□□□□□ -0.6
SSX2B-201ENST00000288839 KIAA0556O60303 1618 aa11.3□□□□□ -0.6
SSX2B-201ENST00000288839 DIP2BQ9P265 1576 aa11.28□□□□□ -0.6
SSX2B-201ENST00000288839 UGGT2Q9NYU1 1516 aa11.28□□□□□ -0.6
SSX2B-201ENST00000288839 MAPKBP1O60336 1514 aa11.27□□□□□ -0.61
SSX2B-201ENST00000288839 KIF21BO75037 1637 aa11.27□□□□□ -0.61
SSX2B-201ENST00000288839 PTPRGP23470 1445 aa11.26□□□□□ -0.61
SSX2B-201ENST00000288839 TNIKQ9UKE5 1360 aa11.26□□□□□ -0.61
SSX2B-201ENST00000288839 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.25□□□□□ -0.61
SSX2B-201ENST00000288839 CARMIL2Q6F5E8 1435 aa11.25□□□□□ -0.61
SSX2B-201ENST00000288839 ABCC2Q92887 1545 aa11.25□□□□□ -0.61
SSX2B-201ENST00000288839 ABCC10Q5T3U5 1492 aa11.24□□□□□ -0.61
SSX2B-201ENST00000288839 RANGAP1P46060 587 aaPredicted RBP11.23□□□□□ -0.61
SSX2B-201ENST00000288839 UBTFP17480 764 aaKnown RBP11.22□□□□□ -0.61
SSX2B-201ENST00000288839 GOLGA3Q08378 1498 aa11.22□□□□□ -0.61
SSX2B-201ENST00000288839 PLB1Q6P1J6 1458 aa11.2□□□□□ -0.62
SSX2B-201ENST00000288839 UACAQ9BZF9 1416 aa11.2□□□□□ -0.62
SSX2B-201ENST00000288839 TSPOAP1O95153 1857 aa11.2□□□□□ -0.62
SSX2B-201ENST00000288839 ZCCHC11Q5TAX3 1644 aaKnown RBP11.2□□□□□ -0.62
SSX2B-201ENST00000288839 FAM69CQ0P6D2 419 aa11.19□□□□□ -0.62
SSX2B-201ENST00000288839 P3H3Q8IVL6 736 aa11.19□□□□□ -0.62
SSX2B-201ENST00000288839 UHRF1BP1LA0JNW5 1464 aa11.19□□□□□ -0.62
SSX2B-201ENST00000288839 ASXL2Q76L83 1435 aa11.18□□□□□ -0.62
SSX2B-201ENST00000288839 NPM1P06748 294 aaKnown RBP eCLIP11.17□□□□□ -0.62
SSX2B-201ENST00000288839 ABCA8O94911 1581 aa11.16□□□□□ -0.62
SSX2B-201ENST00000288839 SAMD9Q5K651 1589 aa11.16□□□□□ -0.62
SSX2B-201ENST00000288839 KDM5BQ9UGL1 1544 aa11.16□□□□□ -0.62
SSX2B-201ENST00000288839 SLC4A2P04920 1241 aa11.16□□□□□ -0.62
SSX2B-201ENST00000288839 PPRC1Q5VV67 1664 aaKnown RBP11.16□□□□□ -0.62
SSX2B-201ENST00000288839 ARID3CA6NKF2 412 aa11.14□□□□□ -0.63
SSX2B-201ENST00000288839 SLC4A1APQ9BWU0 796 aaKnown RBP11.14□□□□□ -0.63
SSX2B-201ENST00000288839 EPRSP07814 1512 aaKnown RBP11.13□□□□□ -0.63
SSX2B-201ENST00000288839 FHOD3Q2V2M9 1422 aa11.12□□□□□ -0.63
SSX2B-201ENST00000288839 KDM6BO15054 1643 aa11.12□□□□□ -0.63
SSX2B-201ENST00000288839 LOC105371045A0A1W2PR82 267 aa11.11□□□□□ -0.63
SSX2B-201ENST00000288839 WDR7Q9Y4E6 1490 aa11.1□□□□□ -0.63
SSX2B-201ENST00000288839 GLI2P10070 1586 aa11.1□□□□□ -0.63
SSX2B-201ENST00000288839 MAP3K4Q9Y6R4 1608 aa11.09□□□□□ -0.63
SSX2B-201ENST00000288839 EFCAB5A4FU69 1503 aa11.09□□□□□ -0.63
SSX2B-201ENST00000288839 U3KPZ7 1027 aaPredicted RBP11.08□□□□□ -0.64
SSX2B-201ENST00000288839 ARHGAP35Q9NRY4 1499 aa11.07□□□□□ -0.64
SSX2B-201ENST00000288839 RAPGEF6Q8TEU7 1601 aa11.07□□□□□ -0.64
SSX2B-201ENST00000288839 COL17A1Q9UMD9 1497 aaPredicted RBP11.06□□□□□ -0.64
SSX2B-201ENST00000288839 NUP153P49790 1475 aaKnown RBP11.05□□□□□ -0.64
SSX2B-201ENST00000288839 CLIP1P30622 1438 aa11.04□□□□□ -0.64
SSX2B-201ENST00000288839 ATP10BO94823 1461 aa11.04□□□□□ -0.64
SSX2B-201ENST00000288839 CEP162Q5TB80 1403 aa11.01□□□□□ -0.65
SSX2B-201ENST00000288839 CFAP43Q8NDM7 1665 aa11.01□□□□□ -0.65
SSX2B-201ENST00000288839 CDK13Q14004 1512 aaKnown RBP11□□□□□ -0.65
SSX2B-201ENST00000288839 KCNH8Q96L42 1107 aa11□□□□□ -0.65
SSX2B-201ENST00000288839 ATP1B4Q9UN42 357 aaPredicted RBP11□□□□□ -0.65
SSX2B-201ENST00000288839 FMN1Q68DA7 1419 aa10.99□□□□□ -0.65
SSX2B-201ENST00000288839 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.98□□□□□ -0.65
SSX2B-201ENST00000288839 HNRNPUL2Q1KMD3 747 aaKnown RBP10.98□□□□□ -0.65
SSX2B-201ENST00000288839 TEX14Q8IWB6 1497 aa10.98□□□□□ -0.65
SSX2B-201ENST00000288839 CD109Q6YHK3 1445 aa10.97□□□□□ -0.65
SSX2B-201ENST00000288839 ABCA9Q8IUA7 1624 aa10.97□□□□□ -0.65
SSX2B-201ENST00000288839 MAGI3Q5TCQ9 1506 aa10.96□□□□□ -0.65
SSX2B-201ENST00000288839 TTC37Q6PGP7 1564 aa10.95□□□□□ -0.66
SSX2B-201ENST00000288839 LRRIQ1Q96JM4 1722 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms