RNA–Protein interactions for RNA: ENST00000288135.5

KIT-201, Transcript of KIT proto-oncogene receptor tyrosine kinase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene KIT, Length 5,186 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KIT-201ENST00000288135 PEG3Q9GZU2 1588 aa11.58□□□□□ -0.56
KIT-201ENST00000288135 HIRIP3Q9BW71 556 aaPredicted RBP11.52□□□□□ -0.57
KIT-201ENST00000288135 TOPBP1Q92547 1522 aa11.51□□□□□ -0.57
KIT-201ENST00000288135 TOP2BQ02880 1626 aa11.51□□□□□ -0.57
KIT-201ENST00000288135 GAPVD1Q14C86 1478 aa11.51□□□□□ -0.57
KIT-201ENST00000288135 POLA1P09884 1462 aaPredicted RBP11.51□□□□□ -0.57
KIT-201ENST00000288135 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.49□□□□□ -0.57
KIT-201ENST00000288135 PLEKHD1A6NEE1 506 aa11.49□□□□□ -0.57
KIT-201ENST00000288135 ZNF316A6NFI3 1004 aaPredicted RBP11.48□□□□□ -0.57
KIT-201ENST00000288135 JPH4Q96JJ6 628 aa11.46□□□□□ -0.57
KIT-201ENST00000288135 SIN3AQ96ST3 1273 aa11.46□□□□□ -0.57
KIT-201ENST00000288135 CENPBP07199 599 aaPredicted RBP11.46□□□□□ -0.58
KIT-201ENST00000288135 CCNB3Q8WWL7 1395 aa11.46□□□□□ -0.58
KIT-201ENST00000288135 CFDP1Q9UEE9 299 aaPredicted RBP11.46□□□□□ -0.58
KIT-201ENST00000288135 FHAD1B1AJZ9 1412 aa11.46□□□□□ -0.58
KIT-201ENST00000288135 NPM1P06748 294 aaKnown RBP eCLIP11.44□□□□□ -0.58
KIT-201ENST00000288135 ARAP1Q96P48 1450 aa11.43□□□□□ -0.58
KIT-201ENST00000288135 PRXQ9BXM0 1461 aa11.43□□□□□ -0.58
KIT-201ENST00000288135 KIF21BO75037 1637 aa11.42□□□□□ -0.58
KIT-201ENST00000288135 SENP3Q9H4L4 574 aaPredicted RBP11.42□□□□□ -0.58
KIT-201ENST00000288135 URB2Q14146 1524 aaKnown RBP11.41□□□□□ -0.58
KIT-201ENST00000288135 TSPY4P0CV99 314 aa11.4□□□□□ -0.58
KIT-201ENST00000288135 TSPY10P0CW01 314 aa11.4□□□□□ -0.58
KIT-201ENST00000288135 MRC2Q9UBG0 1479 aa11.39□□□□□ -0.59
KIT-201ENST00000288135 FOXD1Q16676 465 aa11.39□□□□□ -0.59
KIT-201ENST00000288135 ARHGAP35Q9NRY4 1499 aa11.38□□□□□ -0.59
KIT-201ENST00000288135 PLPPR3Q6T4P5 718 aa11.38□□□□□ -0.59
KIT-201ENST00000288135 DNMBPQ6XZF7 1577 aa11.37□□□□□ -0.59
KIT-201ENST00000288135 SLC4A1APQ9BWU0 796 aaKnown RBP11.37□□□□□ -0.59
KIT-201ENST00000288135 FMN1Q68DA7 1419 aa11.37□□□□□ -0.59
KIT-201ENST00000288135 TONSLQ96HA7 1378 aa11.37□□□□□ -0.59
KIT-201ENST00000288135 KDM2AQ9Y2K7 1162 aa11.37□□□□□ -0.59
KIT-201ENST00000288135 ZNF608Q9ULD9 1512 aaPredicted RBP11.35□□□□□ -0.59
KIT-201ENST00000288135 DDX10Q13206 875 aaKnown RBP11.35□□□□□ -0.59
KIT-201ENST00000288135 LAMC3Q9Y6N6 1575 aa11.34□□□□□ -0.59
KIT-201ENST00000288135 CHGAP10645 457 aaKnown RBP11.33□□□□□ -0.6
KIT-201ENST00000288135 CARMIL2Q6F5E8 1435 aa11.32□□□□□ -0.6
KIT-201ENST00000288135 RAB3GAP2Q9H2M9 1393 aa11.31□□□□□ -0.6
KIT-201ENST00000288135 GRIN2BQ13224 1484 aa11.31□□□□□ -0.6
KIT-201ENST00000288135 ZNF644Q9H582 1327 aaPredicted RBP11.31□□□□□ -0.6
KIT-201ENST00000288135 ABCA10Q8WWZ4 1543 aa11.31□□□□□ -0.6
KIT-201ENST00000288135 RGL3Q3MIN7 710 aa11.31□□□□□ -0.6
KIT-201ENST00000288135 ERICH3Q5RHP9 1530 aa11.3□□□□□ -0.6
KIT-201ENST00000288135 PHLDB1Q86UU1 1377 aa11.3□□□□□ -0.6
KIT-201ENST00000288135 SNAPC4Q5SXM2 1469 aa11.3□□□□□ -0.6
KIT-201ENST00000288135 HNRNPMP52272 730 aaKnown RBP eCLIP11.29□□□□□ -0.6
KIT-201ENST00000288135 BIVM-ERCC5R4GMW8 1640 aa11.28□□□□□ -0.6
KIT-201ENST00000288135 MIER1Q8N108 512 aa11.28□□□□□ -0.6
KIT-201ENST00000288135 IFT140Q96RY7 1462 aa11.26□□□□□ -0.61
KIT-201ENST00000288135 SETD5Q9C0A6 1442 aa11.26□□□□□ -0.61
KIT-201ENST00000288135 PTPRGP23470 1445 aa11.25□□□□□ -0.61
KIT-201ENST00000288135 CYB5RLQ6IPT4 315 aa11.23□□□□□ -0.61
KIT-201ENST00000288135 ANP32CO43423 234 aa11.22□□□□□ -0.61
KIT-201ENST00000288135 LRRC9Q6ZRR7 1453 aa11.22□□□□□ -0.61
KIT-201ENST00000288135 SENP3-EIF4A1A0A087X0R7 540 aa11.21□□□□□ -0.62
KIT-201ENST00000288135 PRDM2Q13029 1718 aa11.2□□□□□ -0.62
KIT-201ENST00000288135 KIF21AQ7Z4S6 1674 aa11.2□□□□□ -0.62
KIT-201ENST00000288135 OSCARQ8IYS5 282 aa11.19□□□□□ -0.62
KIT-201ENST00000288135 PRG4Q92954 1404 aaPredicted RBP11.19□□□□□ -0.62
KIT-201ENST00000288135 BCANQ96GW7 911 aa11.19□□□□□ -0.62
KIT-201ENST00000288135 DHX57Q6P158 1386 aaKnown RBP11.19□□□□□ -0.62
KIT-201ENST00000288135 CASKIN1Q8WXD9 1431 aa11.18□□□□□ -0.62
KIT-201ENST00000288135 PKD2Q13563 968 aa11.18□□□□□ -0.62
KIT-201ENST00000288135 MPHOSPH9Q99550 1183 aa11.17□□□□□ -0.62
KIT-201ENST00000288135 GTF3C3Q9Y5Q9 886 aa11.16□□□□□ -0.62
KIT-201ENST00000288135 CCDC18Q5T9S5 1454 aa11.16□□□□□ -0.62
KIT-201ENST00000288135 CDK13Q14004 1512 aaKnown RBP11.15□□□□□ -0.62
KIT-201ENST00000288135 MLECQ14165 292 aa11.15□□□□□ -0.63
KIT-201ENST00000288135 FGD6Q6ZV73 1430 aa11.14□□□□□ -0.63
KIT-201ENST00000288135 NCOA2Q15596 1464 aa11.14□□□□□ -0.63
KIT-201ENST00000288135 NEFLP07196 543 aa11.14□□□□□ -0.63
KIT-201ENST00000288135 STAG3Q9UJ98 1225 aa11.14□□□□□ -0.63
KIT-201ENST00000288135 GGT6Q6P531 493 aa11.14□□□□□ -0.63
KIT-201ENST00000288135 ESF1Q9H501 851 aaKnown RBP11.13□□□□□ -0.63
KIT-201ENST00000288135 EFCAB2Q5VUJ9 269 aa11.13□□□□□ -0.63
KIT-201ENST00000288135 NUP155O75694 1391 aa11.12□□□□□ -0.63
KIT-201ENST00000288135 PLB1Q6P1J6 1458 aa11.12□□□□□ -0.63
KIT-201ENST00000288135 PCF11O94913 1555 aaKnown RBP11.12□□□□□ -0.63
KIT-201ENST00000288135 EIF4G2P78344 907 aaKnown RBP eCLIP11.12□□□□□ -0.63
KIT-201ENST00000288135 DCAF11Q8TEB1 546 aa11.12□□□□□ -0.63
KIT-201ENST00000288135 GRIN2AQ12879 1464 aa11.11□□□□□ -0.63
KIT-201ENST00000288135 FYCO1Q9BQS8 1478 aa11.11□□□□□ -0.63
KIT-201ENST00000288135 MYOM3Q5VTT5 1437 aa11.11□□□□□ -0.63
KIT-201ENST00000288135 TRHP20396 242 aaPredicted RBP11.1□□□□□ -0.63
KIT-201ENST00000288135 KIAA0586Q9BVV6 1533 aa11.1□□□□□ -0.63
KIT-201ENST00000288135 TIAM1Q13009 1591 aa11.1□□□□□ -0.63
KIT-201ENST00000288135 FAM9BQ8IZU0 186 aa11.1□□□□□ -0.63
KIT-201ENST00000288135 IQGAP2Q13576 1575 aa11.09□□□□□ -0.63
KIT-201ENST00000288135 L3MBTL2Q969R5 705 aa11.09□□□□□ -0.63
KIT-201ENST00000288135 SALL2Q9Y467 1007 aaPredicted RBP11.09□□□□□ -0.63
KIT-201ENST00000288135 ARID4BQ4LE39 1312 aaPredicted RBP11.09□□□□□ -0.63
KIT-201ENST00000288135 SYNJ2O15056 1496 aa11.08□□□□□ -0.64
KIT-201ENST00000288135 CLSPNQ9HAW4 1339 aa11.08□□□□□ -0.64
KIT-201ENST00000288135 KIF3BO15066 747 aa11.08□□□□□ -0.64
KIT-201ENST00000288135 ACIN1Q9UKV3 1341 aaKnown RBP11.08□□□□□ -0.64
KIT-201ENST00000288135 CUL7Q14999 1698 aa11.07□□□□□ -0.64
KIT-201ENST00000288135 EFCAB5A4FU69 1503 aa11.07□□□□□ -0.64
KIT-201ENST00000288135 RRBP1Q9P2E9 1410 aaKnown RBP11.07□□□□□ -0.64
KIT-201ENST00000288135 CARD11Q9BXL7 1154 aa11.07□□□□□ -0.64
KIT-201ENST00000288135 PELP1Q8IZL8 1130 aaKnown RBP11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 126.5 ms