RNA–Protein interactions for RNA: ENST00000287814.4

TIMP4-201, Transcript of TIMP metallopeptidase inhibitor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP4, Length 1,650 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP4-201ENST00000287814 EEA1Q15075 1411 aa33.21■■■□□ 2.91
TIMP4-201ENST00000287814 PRXQ9BXM0 1461 aa33.21■■■□□ 2.91
TIMP4-201ENST00000287814 KIAA0586Q9BVV6 1533 aa33.14■■■□□ 2.9
TIMP4-201ENST00000287814 JPH4Q96JJ6 628 aa33.13■■■□□ 2.89
TIMP4-201ENST00000287814 SHROOM2Q13796 1616 aa33.11■■■□□ 2.89
TIMP4-201ENST00000287814 ERCC6L2Q5T890 1561 aa33.08■■■□□ 2.89
TIMP4-201ENST00000287814 ARAP1Q96P48 1450 aa33.07■■■□□ 2.88
TIMP4-201ENST00000287814 CYB5RLQ6IPT4 315 aa33.05■■■□□ 2.88
TIMP4-201ENST00000287814 PRG4Q92954 1404 aaPredicted RBP33.03■■■□□ 2.88
TIMP4-201ENST00000287814 IQGAP2Q13576 1575 aa32.95■■■□□ 2.87
TIMP4-201ENST00000287814 KIF21BO75037 1637 aa32.86■■■□□ 2.85
TIMP4-201ENST00000287814 CTTNBP2Q8WZ74 1663 aa32.84■■■□□ 2.85
TIMP4-201ENST00000287814 EHMT2Q96KQ7 1210 aa32.83■■■□□ 2.85
TIMP4-201ENST00000287814 UGGT2Q9NYU1 1516 aa32.8■■■□□ 2.84
TIMP4-201ENST00000287814 DISP1Q96F81 1524 aa32.78■■■□□ 2.84
TIMP4-201ENST00000287814 CARMIL2Q6F5E8 1435 aa32.75■■■□□ 2.83
TIMP4-201ENST00000287814 GOLGA3Q08378 1498 aa32.7■■■□□ 2.83
TIMP4-201ENST00000287814 TNIKQ9UKE5 1360 aa32.67■■■□□ 2.82
TIMP4-201ENST00000287814 TTBK1Q5TCY1 1321 aaPredicted RBP32.67■■■□□ 2.82
TIMP4-201ENST00000287814 UBTFP17480 764 aaKnown RBP32.66■■■□□ 2.82
TIMP4-201ENST00000287814 PTPRGP23470 1445 aa32.65■■■□□ 2.82
TIMP4-201ENST00000287814 KIAA0556O60303 1618 aa32.65■■■□□ 2.82
TIMP4-201ENST00000287814 RANGAP1P46060 587 aaPredicted RBP32.61■■■□□ 2.81
TIMP4-201ENST00000287814 P3H3Q8IVL6 736 aa32.56■■■□□ 2.8
TIMP4-201ENST00000287814 SAMD9Q5K651 1589 aa32.49■■■□□ 2.79
TIMP4-201ENST00000287814 ADCY10Q96PN6 1610 aa32.48■■■□□ 2.79
TIMP4-201ENST00000287814 UACAQ9BZF9 1416 aa32.43■■■□□ 2.78
TIMP4-201ENST00000287814 PLB1Q6P1J6 1458 aa32.38■■■□□ 2.77
TIMP4-201ENST00000287814 FHOD3Q2V2M9 1422 aa32.38■■■□□ 2.77
TIMP4-201ENST00000287814 UHRF1BP1LA0JNW5 1464 aa32.37■■■□□ 2.77
TIMP4-201ENST00000287814 NPM1P06748 294 aaKnown RBP eCLIP32.34■■■□□ 2.77
TIMP4-201ENST00000287814 EFCAB5A4FU69 1503 aa32.34■■■□□ 2.77
TIMP4-201ENST00000287814 ABCC2Q92887 1545 aa32.34■■■□□ 2.77
TIMP4-201ENST00000287814 LOC105371045A0A1W2PR82 267 aa32.34■■■□□ 2.77
TIMP4-201ENST00000287814 ARHGAP35Q9NRY4 1499 aa32.31■■■□□ 2.76
TIMP4-201ENST00000287814 ABCA8O94911 1581 aa32.3■■■□□ 2.76
TIMP4-201ENST00000287814 TRHP20396 242 aaPredicted RBP32.28■■■□□ 2.76
TIMP4-201ENST00000287814 KDM5BQ9UGL1 1544 aa32.23■■■□□ 2.75
TIMP4-201ENST00000287814 MAPKBP1O60336 1514 aa32.2■■■□□ 2.75
TIMP4-201ENST00000287814 CLIP1P30622 1438 aa32.15■■■□□ 2.74
TIMP4-201ENST00000287814 ARID3CA6NKF2 412 aa32.15■■■□□ 2.74
TIMP4-201ENST00000287814 ZCCHC11Q5TAX3 1644 aaKnown RBP32.14■■■□□ 2.74
TIMP4-201ENST00000287814 RAPGEF6Q8TEU7 1601 aa32.13■■■□□ 2.73
TIMP4-201ENST00000287814 ASXL2Q76L83 1435 aa32.11■■■□□ 2.73
TIMP4-201ENST00000287814 ATP10BO94823 1461 aa32.08■■■□□ 2.73
TIMP4-201ENST00000287814 NUP153P49790 1475 aaKnown RBP32.08■■■□□ 2.73
TIMP4-201ENST00000287814 FMN1Q68DA7 1419 aa32.07■■■□□ 2.72
TIMP4-201ENST00000287814 ABCC10Q5T3U5 1492 aa32.07■■■□□ 2.72
TIMP4-201ENST00000287814 CEP162Q5TB80 1403 aa32.06■■■□□ 2.72
TIMP4-201ENST00000287814 FAM69CQ0P6D2 419 aa32.04■■■□□ 2.72
TIMP4-201ENST00000287814 DIP2BQ9P265 1576 aa32■■■□□ 2.71
TIMP4-201ENST00000287814 KIF13AQ9H1H9 1805 aa32■■■□□ 2.71
TIMP4-201ENST00000287814 ATP1B4Q9UN42 357 aaPredicted RBP31.96■■■□□ 2.71
TIMP4-201ENST00000287814 WDR7Q9Y4E6 1490 aa31.95■■■□□ 2.71
TIMP4-201ENST00000287814 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.95■■■□□ 2.7
TIMP4-201ENST00000287814 HNRNPUL2Q1KMD3 747 aaKnown RBP31.95■■■□□ 2.7
TIMP4-201ENST00000287814 EPRSP07814 1512 aaKnown RBP31.92■■■□□ 2.7
TIMP4-201ENST00000287814 KCNH8Q96L42 1107 aa31.89■■■□□ 2.7
TIMP4-201ENST00000287814 CDK13Q14004 1512 aaKnown RBP31.88■■■□□ 2.69
TIMP4-201ENST00000287814 CASKIN1Q8WXD9 1431 aa31.87■■■□□ 2.69
TIMP4-201ENST00000287814 HECW1Q76N89 1606 aa31.87■■■□□ 2.69
TIMP4-201ENST00000287814 PCF11O94913 1555 aaKnown RBP31.86■■■□□ 2.69
TIMP4-201ENST00000287814 GLI2P10070 1586 aa31.85■■■□□ 2.69
TIMP4-201ENST00000287814 PLEKHD1A6NEE1 506 aa31.8■■■□□ 2.68
TIMP4-201ENST00000287814 LRRIQ1Q96JM4 1722 aa31.78■■■□□ 2.68
TIMP4-201ENST00000287814 FYCO1Q9BQS8 1478 aa31.77■■■□□ 2.68
TIMP4-201ENST00000287814 TSPOAP1O95153 1857 aa31.71■■■□□ 2.67
TIMP4-201ENST00000287814 MAP3K4Q9Y6R4 1608 aa31.71■■■□□ 2.67
TIMP4-201ENST00000287814 CCDC18Q5T9S5 1454 aa31.67■■■□□ 2.66
TIMP4-201ENST00000287814 CD109Q6YHK3 1445 aa31.66■■■□□ 2.66
TIMP4-201ENST00000287814 PPRC1Q5VV67 1664 aaKnown RBP31.66■■■□□ 2.66
TIMP4-201ENST00000287814 CDK11AQ9UQ88 783 aaPredicted RBP31.66■■■□□ 2.66
TIMP4-201ENST00000287814 VPS8Q8N3P4 1428 aa31.65■■■□□ 2.66
TIMP4-201ENST00000287814 ABCA9Q8IUA7 1624 aa31.62■■■□□ 2.65
TIMP4-201ENST00000287814 CFAP43Q8NDM7 1665 aa31.61■■■□□ 2.65
TIMP4-201ENST00000287814 TROQ12816 1431 aaPredicted RBP31.6■■■□□ 2.65
TIMP4-201ENST00000287814 MAGI3Q5TCQ9 1506 aa31.59■■■□□ 2.65
TIMP4-201ENST00000287814 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP31.57■■■□□ 2.64
TIMP4-201ENST00000287814 TEX14Q8IWB6 1497 aa31.52■■■□□ 2.64
TIMP4-201ENST00000287814 KIF14Q15058 1648 aa31.52■■■□□ 2.64
TIMP4-201ENST00000287814 TTC37Q6PGP7 1564 aa31.51■■■□□ 2.64
TIMP4-201ENST00000287814 COL17A1Q9UMD9 1497 aaPredicted RBP31.45■■■□□ 2.63
TIMP4-201ENST00000287814 MTUS2Q5JR59 1369 aa31.42■■■□□ 2.62
TIMP4-201ENST00000287814 KDM6BO15054 1643 aa31.42■■■□□ 2.62
TIMP4-201ENST00000287814 PLCH2O75038 1416 aa31.39■■■□□ 2.62
TIMP4-201ENST00000287814 TIAM1Q13009 1591 aa31.39■■■□□ 2.62
TIMP4-201ENST00000287814 NEO1Q92859 1461 aa31.34■■■□□ 2.61
TIMP4-201ENST00000287814 FANCAO15360 1455 aa31.33■■■□□ 2.61
TIMP4-201ENST00000287814 KANK4Q5T7N3 995 aaPredicted RBP31.33■■■□□ 2.61
TIMP4-201ENST00000287814 EHBP1L1Q8N3D4 1523 aa31.32■■■□□ 2.6
TIMP4-201ENST00000287814 MAP3K1Q13233 1512 aa31.31■■■□□ 2.6
TIMP4-201ENST00000287814 PHLDB1Q86UU1 1377 aa31.3■■■□□ 2.6
TIMP4-201ENST00000287814 MYO5CQ9NQX4 1742 aa31.29■■■□□ 2.6
TIMP4-201ENST00000287814 ARAP3Q8WWN8 1544 aa31.29■■■□□ 2.6
TIMP4-201ENST00000287814 AKNAQ7Z591 1439 aa31.29■■■□□ 2.6
TIMP4-201ENST00000287814 LRRC9Q6ZRR7 1453 aa31.29■■■□□ 2.6
TIMP4-201ENST00000287814 EFCAB2Q5VUJ9 269 aa31.27■■■□□ 2.6
TIMP4-201ENST00000287814 GPATCH8Q9UKJ3 1502 aaKnown RBP31.24■■■□□ 2.59
TIMP4-201ENST00000287814 APLP2Q06481 763 aa31.24■■■□□ 2.59
TIMP4-201ENST00000287814 ARHGAP5Q13017 1502 aa31.23■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms