RNA–Protein interactions for RNA: ENST00000287777.4

KLHL40-201, Transcript of kelch like family member 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KLHL40, Length 2,517 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL40-201ENST00000287777 CFAP43Q8NDM7 1665 aa27.67■■■□□ 2.02
KLHL40-201ENST00000287777 PCF11O94913 1555 aaKnown RBP27.66■■■□□ 2.02
KLHL40-201ENST00000287777 EFCAB5A4FU69 1503 aa27.64■■■□□ 2.02
KLHL40-201ENST00000287777 LRRC9Q6ZRR7 1453 aa27.64■■■□□ 2.01
KLHL40-201ENST00000287777 ABCA5Q8WWZ7 1642 aa27.62■■■□□ 2.01
KLHL40-201ENST00000287777 PDS5BQ9NTI5 1447 aa27.61■■■□□ 2.01
KLHL40-201ENST00000287777 KIF21AQ7Z4S6 1674 aa27.58■■■□□ 2.01
KLHL40-201ENST00000287777 FHOD3Q2V2M9 1422 aa27.57■■■□□ 2
KLHL40-201ENST00000287777 P3H3Q8IVL6 736 aa27.55■■■□□ 2
KLHL40-201ENST00000287777 FYCO1Q9BQS8 1478 aa27.54■■■□□ 2
KLHL40-201ENST00000287777 SCAF1Q9H7N4 1312 aaKnown RBP27.52■■■□□ 2
KLHL40-201ENST00000287777 DNAJC5BQ9UF47 199 aa27.52■■■□□ 2
KLHL40-201ENST00000287777 AQRO60306 1485 aaKnown RBP eCLIP27.51■■□□□ 1.99
KLHL40-201ENST00000287777 GAPVD1Q14C86 1478 aa27.5■■□□□ 1.99
KLHL40-201ENST00000287777 TDRD9Q8NDG6 1382 aaKnown RBP27.49■■□□□ 1.99
KLHL40-201ENST00000287777 CASKIN1Q8WXD9 1431 aa27.49■■□□□ 1.99
KLHL40-201ENST00000287777 PHLDB1Q86UU1 1377 aa27.48■■□□□ 1.99
KLHL40-201ENST00000287777 ITGAEP38570 1179 aa27.45■■□□□ 1.98
KLHL40-201ENST00000287777 ACIN1Q9UKV3 1341 aaKnown RBP27.43■■□□□ 1.98
KLHL40-201ENST00000287777 TARBP1Q13395 1621 aaKnown RBP27.43■■□□□ 1.98
KLHL40-201ENST00000287777 SAMD9Q5K651 1589 aa27.42■■□□□ 1.98
KLHL40-201ENST00000287777 FMN1Q68DA7 1419 aa27.41■■□□□ 1.98
KLHL40-201ENST00000287777 ATP1B4Q9UN42 357 aaPredicted RBP27.39■■□□□ 1.98
KLHL40-201ENST00000287777 RAB3GAP2Q9H2M9 1393 aa27.39■■□□□ 1.98
KLHL40-201ENST00000287777 SNAPC4Q5SXM2 1469 aa27.38■■□□□ 1.97
KLHL40-201ENST00000287777 NEUROD1Q13562 356 aa27.37■■□□□ 1.97
KLHL40-201ENST00000287777 CENPBP07199 599 aaPredicted RBP27.35■■□□□ 1.97
KLHL40-201ENST00000287777 SETD5Q9C0A6 1442 aa27.33■■□□□ 1.97
KLHL40-201ENST00000287777 PBRM1Q86U86 1689 aa27.31■■□□□ 1.96
KLHL40-201ENST00000287777 FAM50AQ14320 339 aaKnown RBP27.29■■□□□ 1.96
KLHL40-201ENST00000287777 MAPKBP1O60336 1514 aa27.29■■□□□ 1.96
KLHL40-201ENST00000287777 LRRIQ1Q96JM4 1722 aa27.28■■□□□ 1.96
KLHL40-201ENST00000287777 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.26■■□□□ 1.95
KLHL40-201ENST00000287777 MIER1Q8N108 512 aa27.25■■□□□ 1.95
KLHL40-201ENST00000287777 THOC2Q8NI27 1593 aaKnown RBP27.24■■□□□ 1.95
KLHL40-201ENST00000287777 MRC2Q9UBG0 1479 aa27.24■■□□□ 1.95
KLHL40-201ENST00000287777 GRIN2BQ13224 1484 aa27.23■■□□□ 1.95
KLHL40-201ENST00000287777 ADAMTS12P58397 1594 aa27.19■■□□□ 1.94
KLHL40-201ENST00000287777 FGD6Q6ZV73 1430 aa27.18■■□□□ 1.94
KLHL40-201ENST00000287777 MTUS2Q5JR59 1369 aa27.18■■□□□ 1.94
KLHL40-201ENST00000287777 IQGAP2Q13576 1575 aa27.12■■□□□ 1.93
KLHL40-201ENST00000287777 EHBP1L1Q8N3D4 1523 aa27.12■■□□□ 1.93
KLHL40-201ENST00000287777 SUPT6HQ7KZ85 1726 aaKnown RBP27.11■■□□□ 1.93
KLHL40-201ENST00000287777 NCOA2Q15596 1464 aa27.09■■□□□ 1.93
KLHL40-201ENST00000287777 YTHDC1Q96MU7 727 aaKnown RBP27.07■■□□□ 1.92
KLHL40-201ENST00000287777 CCDC18Q5T9S5 1454 aa27.06■■□□□ 1.92
KLHL40-201ENST00000287777 WDR62O43379 1518 aa27.05■■□□□ 1.92
KLHL40-201ENST00000287777 GTF3C3Q9Y5Q9 886 aa27.05■■□□□ 1.92
KLHL40-201ENST00000287777 MYOM3Q5VTT5 1437 aa27.04■■□□□ 1.92
KLHL40-201ENST00000287777 IFT140Q96RY7 1462 aa27.04■■□□□ 1.92
KLHL40-201ENST00000287777 HECW1Q76N89 1606 aa27.04■■□□□ 1.92
KLHL40-201ENST00000287777 UGGT2Q9NYU1 1516 aa27.01■■□□□ 1.92
KLHL40-201ENST00000287777 ARHGEF11O15085 1522 aa27.01■■□□□ 1.91
KLHL40-201ENST00000287777 MAGI3Q5TCQ9 1506 aa27.01■■□□□ 1.91
KLHL40-201ENST00000287777 ZNF608Q9ULD9 1512 aaPredicted RBP26.99■■□□□ 1.91
KLHL40-201ENST00000287777 PTPRKQ15262 1439 aa26.98■■□□□ 1.91
KLHL40-201ENST00000287777 HFM1A2PYH4 1435 aa26.96■■□□□ 1.91
KLHL40-201ENST00000287777 PTPN23Q9H3S7 1636 aa26.96■■□□□ 1.91
KLHL40-201ENST00000287777 SIN3AQ96ST3 1273 aa26.95■■□□□ 1.9
KLHL40-201ENST00000287777 EPRSP07814 1512 aaKnown RBP26.93■■□□□ 1.9
KLHL40-201ENST00000287777 TIMELESSQ9UNS1 1208 aa26.9■■□□□ 1.9
KLHL40-201ENST00000287777 EIF4G3O43432 1585 aaKnown RBP26.89■■□□□ 1.9
KLHL40-201ENST00000287777 NAIPQ13075 1403 aa26.87■■□□□ 1.89
KLHL40-201ENST00000287777 TCOF1Q13428 1488 aaKnown RBP26.87■■□□□ 1.89
KLHL40-201ENST00000287777 CDK13Q14004 1512 aaKnown RBP26.87■■□□□ 1.89
KLHL40-201ENST00000287777 UACAQ9BZF9 1416 aa26.86■■□□□ 1.89
KLHL40-201ENST00000287777 KIAA0586Q9BVV6 1533 aa26.85■■□□□ 1.89
KLHL40-201ENST00000287777 KIAA0556O60303 1618 aa26.85■■□□□ 1.89
KLHL40-201ENST00000287777 GRIN2AQ12879 1464 aa26.81■■□□□ 1.88
KLHL40-201ENST00000287777 DISP1Q96F81 1524 aa26.8■■□□□ 1.88
KLHL40-201ENST00000287777 GCC2Q8IWJ2 1684 aa26.79■■□□□ 1.88
KLHL40-201ENST00000287777 ERCC6Q03468 1493 aa26.78■■□□□ 1.88
KLHL40-201ENST00000287777 MIA2Q96PC5 1412 aa26.76■■□□□ 1.87
KLHL40-201ENST00000287777 PPP1R15AO75807 674 aaPredicted RBP26.74■■□□□ 1.87
KLHL40-201ENST00000287777 MAGI1Q96QZ7 1491 aaPredicted RBP26.72■■□□□ 1.87
KLHL40-201ENST00000287777 AKNAQ7Z591 1439 aa26.72■■□□□ 1.87
KLHL40-201ENST00000287777 RAPGEF6Q8TEU7 1601 aa26.72■■□□□ 1.87
KLHL40-201ENST00000287777 NUP153P49790 1475 aaKnown RBP26.69■■□□□ 1.86
KLHL40-201ENST00000287777 TONSLQ96HA7 1378 aa26.69■■□□□ 1.86
KLHL40-201ENST00000287777 ARID3CA6NKF2 412 aa26.68■■□□□ 1.86
KLHL40-201ENST00000287777 PELP1Q8IZL8 1130 aaKnown RBP26.67■■□□□ 1.86
KLHL40-201ENST00000287777 CEP170Q5SW79 1584 aa26.66■■□□□ 1.86
KLHL40-201ENST00000287777 RRP7BPQ9NSQ0 103 aa26.65■■□□□ 1.86
KLHL40-201ENST00000287777 SYNJ2O15056 1496 aa26.64■■□□□ 1.86
KLHL40-201ENST00000287777 CHIC2Q9UKJ5 165 aa26.64■■□□□ 1.85
KLHL40-201ENST00000287777 KDM6BO15054 1643 aa26.63■■□□□ 1.85
KLHL40-201ENST00000287777 CHMP7Q8WUX9 453 aaPredicted RBP26.57■■□□□ 1.84
KLHL40-201ENST00000287777 DENND4BO75064 1496 aaPredicted RBP26.57■■□□□ 1.84
KLHL40-201ENST00000287777 DNMT1P26358 1616 aaKnown RBP26.57■■□□□ 1.84
KLHL40-201ENST00000287777 KDM5BQ9UGL1 1544 aa26.57■■□□□ 1.84
KLHL40-201ENST00000287777 DDX10Q13206 875 aaKnown RBP26.56■■□□□ 1.84
KLHL40-201ENST00000287777 DAPK1P53355 1430 aa26.55■■□□□ 1.84
KLHL40-201ENST00000287777 NUP160Q12769 1436 aa26.53■■□□□ 1.84
KLHL40-201ENST00000287777 CDK11AQ9UQ88 783 aaPredicted RBP26.53■■□□□ 1.84
KLHL40-201ENST00000287777 ROCK1Q13464 1354 aa26.51■■□□□ 1.83
KLHL40-201ENST00000287777 HIRIP3Q9BW71 556 aaPredicted RBP26.5■■□□□ 1.83
KLHL40-201ENST00000287777 TRIM52Q96A61 297 aa26.49■■□□□ 1.83
KLHL40-201ENST00000287777 TROQ12816 1431 aaPredicted RBP26.49■■□□□ 1.83
KLHL40-201ENST00000287777 PLB1Q6P1J6 1458 aa26.49■■□□□ 1.83
KLHL40-201ENST00000287777 ABCC5O15440 1437 aa26.49■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms