RNA–Protein interactions for RNA: ENST00000285398.6

ERCC3-201, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERCC3, Length 2,750 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-201ENST00000285398 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.82■□□□□ 0.12
ERCC3-201ENST00000285398 TNIKQ9UKE5 1360 aa15.81■□□□□ 0.12
ERCC3-201ENST00000285398 FBLN2P98095 1184 aa15.81■□□□□ 0.12
ERCC3-201ENST00000285398 CEP162Q5TB80 1403 aa15.8■□□□□ 0.12
ERCC3-201ENST00000285398 EIF4G3O43432 1585 aaKnown RBP15.79■□□□□ 0.12
ERCC3-201ENST00000285398 ERICH3Q5RHP9 1530 aa15.77■□□□□ 0.12
ERCC3-201ENST00000285398 GRIN2BQ13224 1484 aa15.76■□□□□ 0.11
ERCC3-201ENST00000285398 PBRM1Q86U86 1689 aa15.76■□□□□ 0.11
ERCC3-201ENST00000285398 SNAPC4Q5SXM2 1469 aa15.75■□□□□ 0.11
ERCC3-201ENST00000285398 P3H3Q8IVL6 736 aa15.72■□□□□ 0.11
ERCC3-201ENST00000285398 CUL7Q14999 1698 aa15.71■□□□□ 0.11
ERCC3-201ENST00000285398 CLIP1P30622 1438 aa15.71■□□□□ 0.11
ERCC3-201ENST00000285398 CHMP7Q8WUX9 453 aaPredicted RBP15.7■□□□□ 0.1
ERCC3-201ENST00000285398 TTBK1Q5TCY1 1321 aaPredicted RBP15.69■□□□□ 0.1
ERCC3-201ENST00000285398 FHAD1B1AJZ9 1412 aa15.68■□□□□ 0.1
ERCC3-201ENST00000285398 ADAMTS12P58397 1594 aa15.67■□□□□ 0.1
ERCC3-201ENST00000285398 PRKCSHP14314 528 aaPredicted RBP15.63■□□□□ 0.09
ERCC3-201ENST00000285398 MAGI1Q96QZ7 1491 aaPredicted RBP15.62■□□□□ 0.09
ERCC3-201ENST00000285398 ZNF316A6NFI3 1004 aaPredicted RBP15.62■□□□□ 0.09
ERCC3-201ENST00000285398 SYNJ2O15056 1496 aa15.59■□□□□ 0.09
ERCC3-201ENST00000285398 GRIN2AQ12879 1464 aa15.59■□□□□ 0.09
ERCC3-201ENST00000285398 ARAP1Q96P48 1450 aa15.58■□□□□ 0.09
ERCC3-201ENST00000285398 ARHGAP35Q9NRY4 1499 aa15.58■□□□□ 0.08
ERCC3-201ENST00000285398 YTHDC1Q96MU7 727 aaKnown RBP15.55■□□□□ 0.08
ERCC3-201ENST00000285398 FHOD3Q2V2M9 1422 aa15.54■□□□□ 0.08
ERCC3-201ENST00000285398 ATP1B4Q9UN42 357 aaPredicted RBP15.54■□□□□ 0.08
ERCC3-201ENST00000285398 CTTNBP2Q8WZ74 1663 aa15.53■□□□□ 0.08
ERCC3-201ENST00000285398 CEP170Q5SW79 1584 aa15.51■□□□□ 0.07
ERCC3-201ENST00000285398 VPS8Q8N3P4 1428 aa15.49■□□□□ 0.07
ERCC3-201ENST00000285398 CHD1O14646 1710 aa15.48■□□□□ 0.07
ERCC3-201ENST00000285398 ARID3CA6NKF2 412 aa15.47■□□□□ 0.07
ERCC3-201ENST00000285398 IQGAP2Q13576 1575 aa15.47■□□□□ 0.07
ERCC3-201ENST00000285398 NUP160Q12769 1436 aa15.47■□□□□ 0.07
ERCC3-201ENST00000285398 KIAA0586Q9BVV6 1533 aa15.46■□□□□ 0.07
ERCC3-201ENST00000285398 JPH4Q96JJ6 628 aa15.46■□□□□ 0.07
ERCC3-201ENST00000285398 CLSPNQ9HAW4 1339 aa15.45■□□□□ 0.06
ERCC3-201ENST00000285398 MIER1Q8N108 512 aa15.45■□□□□ 0.06
ERCC3-201ENST00000285398 APLP2Q06481 763 aa15.42■□□□□ 0.06
ERCC3-201ENST00000285398 KANK4Q5T7N3 995 aaPredicted RBP15.41■□□□□ 0.06
ERCC3-201ENST00000285398 DISP1Q96F81 1524 aa15.38■□□□□ 0.05
ERCC3-201ENST00000285398 SAMD9Q5K651 1589 aa15.38■□□□□ 0.05
ERCC3-201ENST00000285398 EFCAB5A4FU69 1503 aa15.37■□□□□ 0.05
ERCC3-201ENST00000285398 UGGT2Q9NYU1 1516 aa15.37■□□□□ 0.05
ERCC3-201ENST00000285398 PRG4Q92954 1404 aaPredicted RBP15.35■□□□□ 0.05
ERCC3-201ENST00000285398 PCF11O94913 1555 aaKnown RBP15.34■□□□□ 0.05
ERCC3-201ENST00000285398 ANP32EQ9BTT0 268 aa15.32■□□□□ 0.04
ERCC3-201ENST00000285398 KIAA0556O60303 1618 aa15.31■□□□□ 0.04
ERCC3-201ENST00000285398 ERCC6L2Q5T890 1561 aa15.31■□□□□ 0.04
ERCC3-201ENST00000285398 FMN1Q68DA7 1419 aa15.31■□□□□ 0.04
ERCC3-201ENST00000285398 OSCARQ8IYS5 282 aa15.31■□□□□ 0.04
ERCC3-201ENST00000285398 CLASP1Q7Z460 1538 aa15.29■□□□□ 0.04
ERCC3-201ENST00000285398 HNRNPUL2Q1KMD3 747 aaKnown RBP15.28■□□□□ 0.04
ERCC3-201ENST00000285398 CARMIL2Q6F5E8 1435 aa15.28■□□□□ 0.04
ERCC3-201ENST00000285398 SUPT16HQ9Y5B9 1047 aaKnown RBP15.28■□□□□ 0.04
ERCC3-201ENST00000285398 PLB1Q6P1J6 1458 aa15.27■□□□□ 0.04
ERCC3-201ENST00000285398 CASKIN1Q8WXD9 1431 aa15.27■□□□□ 0.03
ERCC3-201ENST00000285398 BCL11AQ9H165 835 aa15.25■□□□□ 0.03
ERCC3-201ENST00000285398 SHROOM2Q13796 1616 aa15.24■□□□□ 0.03
ERCC3-201ENST00000285398 FYCO1Q9BQS8 1478 aa15.23■□□□□ 0.03
ERCC3-201ENST00000285398 PTPRGP23470 1445 aa15.23■□□□□ 0.03
ERCC3-201ENST00000285398 CDK13Q14004 1512 aaKnown RBP15.22■□□□□ 0.03
ERCC3-201ENST00000285398 TIAM1Q13009 1591 aa15.21■□□□□ 0.02
ERCC3-201ENST00000285398 TSHZ2Q9NRE2 1034 aa15.2■□□□□ 0.02
ERCC3-201ENST00000285398 LRRIQ1Q96JM4 1722 aa15.19■□□□□ 0.02
ERCC3-201ENST00000285398 NUP153P49790 1475 aaKnown RBP15.18■□□□□ 0.02
ERCC3-201ENST00000285398 LRRC9Q6ZRR7 1453 aa15.18■□□□□ 0.02
ERCC3-201ENST00000285398 MTUS2Q5JR59 1369 aa15.17■□□□□ 0.02
ERCC3-201ENST00000285398 EPRSP07814 1512 aaKnown RBP15.17■□□□□ 0.02
ERCC3-201ENST00000285398 MAGI3Q5TCQ9 1506 aa15.14■□□□□ 0.01
ERCC3-201ENST00000285398 RAPGEF6Q8TEU7 1601 aa15.14■□□□□ 0.01
ERCC3-201ENST00000285398 ITGAEP38570 1179 aa15.13■□□□□ 0.01
ERCC3-201ENST00000285398 DAXXQ9UER7 740 aaPredicted RBP15.13■□□□□ 0.01
ERCC3-201ENST00000285398 PHLDB1Q86UU1 1377 aa15.13■□□□□ 0.01
ERCC3-201ENST00000285398 HECW1Q76N89 1606 aa15.12■□□□□ 0.01
ERCC3-201ENST00000285398 ERICH6Q7L0X2 663 aa15.11■□□□□ 0.01
ERCC3-201ENST00000285398 CFAP43Q8NDM7 1665 aa15.1■□□□□ 0.01
ERCC3-201ENST00000285398 MAP3K1Q13233 1512 aa15.1■□□□□ 0.01
ERCC3-201ENST00000285398 ABCA8O94911 1581 aa15.1■□□□□ 0.01
ERCC3-201ENST00000285398 UACAQ9BZF9 1416 aa15.09■□□□□ 0.01
ERCC3-201ENST00000285398 ATP10BO94823 1461 aa15.08■□□□□ 0
ERCC3-201ENST00000285398 FAM50AQ14320 339 aaKnown RBP15.07■□□□□ 0
ERCC3-201ENST00000285398 CCDC18Q5T9S5 1454 aa15.07■□□□□ 0
ERCC3-201ENST00000285398 CYB5RLQ6IPT4 315 aa15.06■□□□□ 0
ERCC3-201ENST00000285398 KCNH8Q96L42 1107 aa15.05■□□□□ -0
ERCC3-201ENST00000285398 NCOA2Q15596 1464 aa15.04■□□□□ -0
ERCC3-201ENST00000285398 PLEKHD1A6NEE1 506 aa15.04■□□□□ -0
ERCC3-201ENST00000285398 CDK11AQ9UQ88 783 aaPredicted RBP15.04■□□□□ -0
ERCC3-201ENST00000285398 DHX57Q6P158 1386 aaKnown RBP15.04■□□□□ -0
ERCC3-201ENST00000285398 ARHGEF11O15085 1522 aa15.03■□□□□ -0
ERCC3-201ENST00000285398 CCNB3Q8WWL7 1395 aa15.01□□□□□ -0.01
ERCC3-201ENST00000285398 ABCC2Q92887 1545 aa15□□□□□ -0.01
ERCC3-201ENST00000285398 EHBP1L1Q8N3D4 1523 aa15□□□□□ -0.01
ERCC3-201ENST00000285398 ZNF644Q9H582 1327 aaPredicted RBP14.98□□□□□ -0.01
ERCC3-201ENST00000285398 ZNF777Q9ULD5 760 aaPredicted RBP14.98□□□□□ -0.01
ERCC3-201ENST00000285398 TROQ12816 1431 aaPredicted RBP14.98□□□□□ -0.01
ERCC3-201ENST00000285398 RRBP1Q9P2E9 1410 aaKnown RBP14.97□□□□□ -0.01
ERCC3-201ENST00000285398 KIF14Q15058 1648 aa14.97□□□□□ -0.01
ERCC3-201ENST00000285398 ADCY10Q96PN6 1610 aa14.97□□□□□ -0.01
ERCC3-201ENST00000285398 RIMBP3CA6NJZ7 1639 aa14.95□□□□□ -0.02
ERCC3-201ENST00000285398 RIMBP3BA6NNM3 1639 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms