RNA–Protein interactions for RNA: ENST00000283290.9

ATG3-201, Transcript of autophagy related 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG3, Length 1,570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-201ENST00000283290 RAPGEF2Q9Y4G8 1499 aa28.99■■■□□ 2.23
ATG3-201ENST00000283290 ARAP1Q96P48 1450 aa28.98■■■□□ 2.23
ATG3-201ENST00000283290 ERCC6L2Q5T890 1561 aa28.97■■■□□ 2.23
ATG3-201ENST00000283290 EHMT2Q96KQ7 1210 aa28.96■■■□□ 2.23
ATG3-201ENST00000283290 EEA1Q15075 1411 aa28.95■■■□□ 2.23
ATG3-201ENST00000283290 PRXQ9BXM0 1461 aa28.94■■■□□ 2.22
ATG3-201ENST00000283290 KIAA0586Q9BVV6 1533 aa28.93■■■□□ 2.22
ATG3-201ENST00000283290 CYB5RLQ6IPT4 315 aa28.89■■■□□ 2.22
ATG3-201ENST00000283290 JPH4Q96JJ6 628 aa28.87■■■□□ 2.21
ATG3-201ENST00000283290 PRG4Q92954 1404 aaPredicted RBP28.86■■■□□ 2.21
ATG3-201ENST00000283290 IQGAP2Q13576 1575 aa28.83■■■□□ 2.21
ATG3-201ENST00000283290 CTTNBP2Q8WZ74 1663 aa28.81■■■□□ 2.2
ATG3-201ENST00000283290 KIF21BO75037 1637 aa28.77■■■□□ 2.2
ATG3-201ENST00000283290 UGGT2Q9NYU1 1516 aa28.65■■■□□ 2.18
ATG3-201ENST00000283290 RANGAP1P46060 587 aaPredicted RBP28.63■■■□□ 2.17
ATG3-201ENST00000283290 DISP1Q96F81 1524 aa28.62■■■□□ 2.17
ATG3-201ENST00000283290 GOLGA3Q08378 1498 aa28.61■■■□□ 2.17
ATG3-201ENST00000283290 CARMIL2Q6F5E8 1435 aa28.6■■■□□ 2.17
ATG3-201ENST00000283290 UBTFP17480 764 aaKnown RBP28.59■■■□□ 2.17
ATG3-201ENST00000283290 TTBK1Q5TCY1 1321 aaPredicted RBP28.57■■■□□ 2.16
ATG3-201ENST00000283290 KIAA0556O60303 1618 aa28.57■■■□□ 2.16
ATG3-201ENST00000283290 TNIKQ9UKE5 1360 aa28.52■■■□□ 2.16
ATG3-201ENST00000283290 PTPRGP23470 1445 aa28.49■■■□□ 2.15
ATG3-201ENST00000283290 LOC105371045A0A1W2PR82 267 aa28.46■■■□□ 2.15
ATG3-201ENST00000283290 P3H3Q8IVL6 736 aa28.46■■■□□ 2.15
ATG3-201ENST00000283290 ADCY10Q96PN6 1610 aa28.46■■■□□ 2.15
ATG3-201ENST00000283290 SAMD9Q5K651 1589 aa28.4■■■□□ 2.14
ATG3-201ENST00000283290 UACAQ9BZF9 1416 aa28.31■■■□□ 2.12
ATG3-201ENST00000283290 FHOD3Q2V2M9 1422 aa28.29■■■□□ 2.12
ATG3-201ENST00000283290 ABCC2Q92887 1545 aa28.29■■■□□ 2.12
ATG3-201ENST00000283290 UHRF1BP1LA0JNW5 1464 aa28.28■■■□□ 2.12
ATG3-201ENST00000283290 TRHP20396 242 aaPredicted RBP28.28■■■□□ 2.12
ATG3-201ENST00000283290 PLB1Q6P1J6 1458 aa28.26■■■□□ 2.12
ATG3-201ENST00000283290 NPM1P06748 294 aaKnown RBP eCLIP28.24■■■□□ 2.11
ATG3-201ENST00000283290 EFCAB5A4FU69 1503 aa28.24■■■□□ 2.11
ATG3-201ENST00000283290 ARHGAP35Q9NRY4 1499 aa28.24■■■□□ 2.11
ATG3-201ENST00000283290 ABCA8O94911 1581 aa28.23■■■□□ 2.11
ATG3-201ENST00000283290 MAPKBP1O60336 1514 aa28.22■■■□□ 2.11
ATG3-201ENST00000283290 ZCCHC11Q5TAX3 1644 aaKnown RBP28.17■■■□□ 2.1
ATG3-201ENST00000283290 KDM5BQ9UGL1 1544 aa28.16■■■□□ 2.1
ATG3-201ENST00000283290 KIF13AQ9H1H9 1805 aa28.15■■■□□ 2.1
ATG3-201ENST00000283290 CLIP1P30622 1438 aa28.14■■■□□ 2.1
ATG3-201ENST00000283290 ARID3CA6NKF2 412 aa28.13■■■□□ 2.09
ATG3-201ENST00000283290 RAPGEF6Q8TEU7 1601 aa28.12■■■□□ 2.09
ATG3-201ENST00000283290 CEP162Q5TB80 1403 aa28.11■■■□□ 2.09
ATG3-201ENST00000283290 ASXL2Q76L83 1435 aa28.07■■■□□ 2.08
ATG3-201ENST00000283290 DIP2BQ9P265 1576 aa28.07■■■□□ 2.08
ATG3-201ENST00000283290 ABCC10Q5T3U5 1492 aa28.07■■■□□ 2.08
ATG3-201ENST00000283290 FAM69CQ0P6D2 419 aa27.99■■■□□ 2.07
ATG3-201ENST00000283290 NUP153P49790 1475 aaKnown RBP27.99■■■□□ 2.07
ATG3-201ENST00000283290 ATP1B4Q9UN42 357 aaPredicted RBP27.98■■■□□ 2.07
ATG3-201ENST00000283290 ATP10BO94823 1461 aa27.98■■■□□ 2.07
ATG3-201ENST00000283290 FMN1Q68DA7 1419 aa27.95■■■□□ 2.07
ATG3-201ENST00000283290 PCF11O94913 1555 aaKnown RBP27.94■■■□□ 2.06
ATG3-201ENST00000283290 WDR7Q9Y4E6 1490 aa27.93■■■□□ 2.06
ATG3-201ENST00000283290 LRRIQ1Q96JM4 1722 aa27.92■■■□□ 2.06
ATG3-201ENST00000283290 EPRSP07814 1512 aaKnown RBP27.91■■■□□ 2.06
ATG3-201ENST00000283290 TSPOAP1O95153 1857 aa27.9■■■□□ 2.06
ATG3-201ENST00000283290 GLI2P10070 1586 aa27.89■■■□□ 2.06
ATG3-201ENST00000283290 CDK13Q14004 1512 aaKnown RBP27.88■■■□□ 2.05
ATG3-201ENST00000283290 HECW1Q76N89 1606 aa27.88■■■□□ 2.05
ATG3-201ENST00000283290 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.87■■■□□ 2.05
ATG3-201ENST00000283290 HNRNPUL2Q1KMD3 747 aaKnown RBP27.87■■■□□ 2.05
ATG3-201ENST00000283290 MAP3K4Q9Y6R4 1608 aa27.81■■■□□ 2.04
ATG3-201ENST00000283290 KCNH8Q96L42 1107 aa27.81■■■□□ 2.04
ATG3-201ENST00000283290 PPRC1Q5VV67 1664 aaKnown RBP27.8■■■□□ 2.04
ATG3-201ENST00000283290 CASKIN1Q8WXD9 1431 aa27.79■■■□□ 2.04
ATG3-201ENST00000283290 FYCO1Q9BQS8 1478 aa27.75■■■□□ 2.03
ATG3-201ENST00000283290 CFAP43Q8NDM7 1665 aa27.74■■■□□ 2.03
ATG3-201ENST00000283290 VPS8Q8N3P4 1428 aa27.7■■■□□ 2.02
ATG3-201ENST00000283290 ABCA9Q8IUA7 1624 aa27.69■■■□□ 2.02
ATG3-201ENST00000283290 PLEKHD1A6NEE1 506 aa27.69■■■□□ 2.02
ATG3-201ENST00000283290 CD109Q6YHK3 1445 aa27.65■■■□□ 2.02
ATG3-201ENST00000283290 CCDC18Q5T9S5 1454 aa27.65■■■□□ 2.02
ATG3-201ENST00000283290 MAGI3Q5TCQ9 1506 aa27.63■■■□□ 2.01
ATG3-201ENST00000283290 TEX14Q8IWB6 1497 aa27.61■■■□□ 2.01
ATG3-201ENST00000283290 KDM6BO15054 1643 aa27.6■■■□□ 2.01
ATG3-201ENST00000283290 TTC37Q6PGP7 1564 aa27.59■■■□□ 2.01
ATG3-201ENST00000283290 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.59■■■□□ 2.013e-6■■■■□ 23
ATG3-201ENST00000283290 KIF14Q15058 1648 aa27.58■■■□□ 2.01
ATG3-201ENST00000283290 CDK11AQ9UQ88 783 aaPredicted RBP27.57■■■□□ 2
ATG3-201ENST00000283290 TROQ12816 1431 aaPredicted RBP27.55■■■□□ 2
ATG3-201ENST00000283290 TIAM1Q13009 1591 aa27.5■■□□□ 1.99
ATG3-201ENST00000283290 COL17A1Q9UMD9 1497 aaPredicted RBP27.48■■□□□ 1.99
ATG3-201ENST00000283290 MYO5CQ9NQX4 1742 aa27.45■■□□□ 1.99
ATG3-201ENST00000283290 MTUS2Q5JR59 1369 aa27.44■■□□□ 1.98
ATG3-201ENST00000283290 KANK4Q5T7N3 995 aaPredicted RBP27.42■■□□□ 1.98
ATG3-201ENST00000283290 NEO1Q92859 1461 aa27.4■■□□□ 1.98
ATG3-201ENST00000283290 CFAP74Q9C0B2 1584 aa27.38■■□□□ 1.97
ATG3-201ENST00000283290 EHBP1L1Q8N3D4 1523 aa27.38■■□□□ 1.97
ATG3-201ENST00000283290 FANCAO15360 1455 aa27.37■■□□□ 1.97
ATG3-201ENST00000283290 PLCH2O75038 1416 aa27.37■■□□□ 1.97
ATG3-201ENST00000283290 ARAP3Q8WWN8 1544 aa27.36■■□□□ 1.97
ATG3-201ENST00000283290 LRRC9Q6ZRR7 1453 aa27.35■■□□□ 1.97
ATG3-201ENST00000283290 APLP2Q06481 763 aa27.35■■□□□ 1.97
ATG3-201ENST00000283290 CDC42BPBQ9Y5S2 1711 aa27.34■■□□□ 1.97
ATG3-201ENST00000283290 CDC42BPAQ5VT25 1732 aa27.34■■□□□ 1.97
ATG3-201ENST00000283290 PREX2Q70Z35 1606 aa27.33■■□□□ 1.97
ATG3-201ENST00000283290 PHLDB1Q86UU1 1377 aa27.33■■□□□ 1.97
ATG3-201ENST00000283290 PPARGC1BQ86YN6 1023 aaKnown RBP27.33■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms