RNA–Protein interactions for RNA: ENST00000281589.4

PABPC3-201, Transcript of poly(A) binding protein cytoplasmic 3, humanhuman

APPRIS P1 BASIC

Gene PABPC3, Length 3,387 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC3-201ENST00000281589 TOP2BQ02880 1626 aa13.04□□□□□ -0.32
PABPC3-201ENST00000281589 ZMYND15Q9H091 742 aa13.02□□□□□ -0.33
PABPC3-201ENST00000281589 ZNF316A6NFI3 1004 aaPredicted RBP13.01□□□□□ -0.33
PABPC3-201ENST00000281589 NCAPD3P42695 1498 aa13.01□□□□□ -0.33
PABPC3-201ENST00000281589 A0A0U1RQG5 324 aaPredicted RBP13□□□□□ -0.33
PABPC3-201ENST00000281589 FGD1P98174 961 aa12.99□□□□□ -0.33
PABPC3-201ENST00000281589 BIVM-ERCC5R4GMW8 1640 aa12.99□□□□□ -0.33
PABPC3-201ENST00000281589 ITGAEP38570 1179 aa12.97□□□□□ -0.33
PABPC3-201ENST00000281589 CUX1P39880 1505 aa12.96□□□□□ -0.34
PABPC3-201ENST00000281589 ATP1B4Q9UN42 357 aaPredicted RBP12.95□□□□□ -0.34
PABPC3-201ENST00000281589 BCL11BQ9C0K0 894 aaPredicted RBP12.95□□□□□ -0.34
PABPC3-201ENST00000281589 BCANQ96GW7 911 aa12.94□□□□□ -0.34
PABPC3-201ENST00000281589 FANCIQ9NVI1 1328 aa12.94□□□□□ -0.34
PABPC3-201ENST00000281589 P3H3Q8IVL6 736 aa12.94□□□□□ -0.34
PABPC3-201ENST00000281589 HMGXB3Q12766 1538 aa12.92□□□□□ -0.34
PABPC3-201ENST00000281589 KANK4Q5T7N3 995 aaPredicted RBP12.92□□□□□ -0.34
PABPC3-201ENST00000281589 KIF27Q86VH2 1401 aa12.92□□□□□ -0.34
PABPC3-201ENST00000281589 PRXQ9BXM0 1461 aa12.92□□□□□ -0.34
PABPC3-201ENST00000281589 ERICH3Q5RHP9 1530 aa12.92□□□□□ -0.34
PABPC3-201ENST00000281589 AAMPQ13685 434 aa12.91□□□□□ -0.34
PABPC3-201ENST00000281589 ARAP1Q96P48 1450 aa12.91□□□□□ -0.34
PABPC3-201ENST00000281589 NCBP3Q53F19 620 aaKnown RBP12.9□□□□□ -0.34
PABPC3-201ENST00000281589 CFTRP13569 1480 aa12.9□□□□□ -0.34
PABPC3-201ENST00000281589 VSIG10Q8N0Z9 540 aa12.89□□□□□ -0.35
PABPC3-201ENST00000281589 CUX2O14529 1486 aa12.89□□□□□ -0.35
PABPC3-201ENST00000281589 TIMELESSQ9UNS1 1208 aa12.89□□□□□ -0.35
PABPC3-201ENST00000281589 RBM10P98175 930 aaKnown RBP12.87□□□□□ -0.35
PABPC3-201ENST00000281589 CADPSQ9ULU8 1353 aa12.86□□□□□ -0.35
PABPC3-201ENST00000281589 DNAJC5BQ9UF47 199 aa12.83□□□□□ -0.36
PABPC3-201ENST00000281589 GLIPR1L2Q4G1C9 344 aa12.83□□□□□ -0.36
PABPC3-201ENST00000281589 CC2D2AQ9P2K1 1620 aa12.82□□□□□ -0.36
PABPC3-201ENST00000281589 NBR1Q14596 966 aa12.81□□□□□ -0.36
PABPC3-201ENST00000281589 DHX57Q6P158 1386 aaKnown RBP12.8□□□□□ -0.36
PABPC3-201ENST00000281589 NESP48681 1621 aa12.8□□□□□ -0.36
PABPC3-201ENST00000281589 FGD5Q6ZNL6 1462 aa12.79□□□□□ -0.36
PABPC3-201ENST00000281589 IGF1RP08069 1367 aa12.79□□□□□ -0.36
PABPC3-201ENST00000281589 CARMIL1Q5VZK9 1371 aa12.78□□□□□ -0.36
PABPC3-201ENST00000281589 ARHGAP35Q9NRY4 1499 aa12.78□□□□□ -0.36
PABPC3-201ENST00000281589 RAD54L2Q9Y4B4 1467 aa12.77□□□□□ -0.37
PABPC3-201ENST00000281589 RRBP1Q9P2E9 1410 aaKnown RBP12.76□□□□□ -0.37
PABPC3-201ENST00000281589 FANCD2Q9BXW9 1451 aa12.76□□□□□ -0.37
PABPC3-201ENST00000281589 FKBP8Q14318 412 aa12.75□□□□□ -0.37
PABPC3-201ENST00000281589 FAM50AQ14320 339 aaKnown RBP12.75□□□□□ -0.37
PABPC3-201ENST00000281589 PRDM2Q13029 1718 aa12.74□□□□□ -0.37
PABPC3-201ENST00000281589 CCNB3Q8WWL7 1395 aa12.71□□□□□ -0.37
PABPC3-201ENST00000281589 ARXQ96QS3 562 aa12.71□□□□□ -0.37
PABPC3-201ENST00000281589 TAF7LQ5H9L4 462 aa12.7□□□□□ -0.38
PABPC3-201ENST00000281589 TDRD9Q8NDG6 1382 aaKnown RBP12.68□□□□□ -0.38
PABPC3-201ENST00000281589 RSPH6AQ9H0K4 717 aa12.68□□□□□ -0.38
PABPC3-201ENST00000281589 FHOD3Q2V2M9 1422 aa12.66□□□□□ -0.38
PABPC3-201ENST00000281589 ARID3CA6NKF2 412 aa12.66□□□□□ -0.38
PABPC3-201ENST00000281589 TIAM1Q13009 1591 aa12.65□□□□□ -0.38
PABPC3-201ENST00000281589 C11orf95C9JLR9 678 aaPredicted RBP12.64□□□□□ -0.39
PABPC3-201ENST00000281589 POLA1P09884 1462 aaPredicted RBP12.63□□□□□ -0.39
PABPC3-201ENST00000281589 PAK3O75914 559 aaPredicted RBP12.63□□□□□ -0.39
PABPC3-201ENST00000281589 RAB3GAP2Q9H2M9 1393 aa12.62□□□□□ -0.39
PABPC3-201ENST00000281589 TOPBP1Q92547 1522 aa12.62□□□□□ -0.39
PABPC3-201ENST00000281589 NOP58Q9Y2X3 529 aaKnown RBP12.61□□□□□ -0.39
PABPC3-201ENST00000281589 RTL5Q5HYW3 569 aaPredicted RBP12.6□□□□□ -0.39
PABPC3-201ENST00000281589 LRRC9Q6ZRR7 1453 aa12.6□□□□□ -0.39
PABPC3-201ENST00000281589 MAPKBP1O60336 1514 aa12.59□□□□□ -0.39
PABPC3-201ENST00000281589 MAP3K1Q13233 1512 aa12.59□□□□□ -0.39
PABPC3-201ENST00000281589 BRPF3Q9ULD4 1205 aa12.59□□□□□ -0.39
PABPC3-201ENST00000281589 PAXIP1Q6ZW49 1069 aaPredicted RBP12.59□□□□□ -0.39
PABPC3-201ENST00000281589 PHLDB1Q86UU1 1377 aa12.59□□□□□ -0.39
PABPC3-201ENST00000281589 PCF11O94913 1555 aaKnown RBP12.58□□□□□ -0.4
PABPC3-201ENST00000281589 DNMBPQ6XZF7 1577 aa12.56□□□□□ -0.4
PABPC3-201ENST00000281589 SIN3AQ96ST3 1273 aa12.56□□□□□ -0.4
PABPC3-201ENST00000281589 CFAP43Q8NDM7 1665 aa12.56□□□□□ -0.4
PABPC3-201ENST00000281589 SETD5Q9C0A6 1442 aa12.55□□□□□ -0.4
PABPC3-201ENST00000281589 URB2Q14146 1524 aaKnown RBP12.55□□□□□ -0.4
PABPC3-201ENST00000281589 FHAD1B1AJZ9 1412 aa12.54□□□□□ -0.4
PABPC3-201ENST00000281589 ABCA10Q8WWZ4 1543 aa12.53□□□□□ -0.4
PABPC3-201ENST00000281589 WASHC2AQ641Q2 1341 aa12.52□□□□□ -0.4
PABPC3-201ENST00000281589 HIRIP3Q9BW71 556 aaPredicted RBP12.52□□□□□ -0.4
PABPC3-201ENST00000281589 WASHC2CQ9Y4E1 1318 aa12.52□□□□□ -0.4
PABPC3-201ENST00000281589 DHX37Q8IY37 1157 aaKnown RBP12.52□□□□□ -0.41
PABPC3-201ENST00000281589 CDK11AQ9UQ88 783 aaPredicted RBP12.51□□□□□ -0.41
PABPC3-201ENST00000281589 PDS5BQ9NTI5 1447 aa12.5□□□□□ -0.41
PABPC3-201ENST00000281589 MTUS2Q5JR59 1369 aa12.5□□□□□ -0.41
PABPC3-201ENST00000281589 WDR97A6NE52 1622 aa12.48□□□□□ -0.41
PABPC3-201ENST00000281589 GAPVD1Q14C86 1478 aa12.48□□□□□ -0.41
PABPC3-201ENST00000281589 CHIC2Q9UKJ5 165 aa12.48□□□□□ -0.41
PABPC3-201ENST00000281589 FYCO1Q9BQS8 1478 aa12.47□□□□□ -0.41
PABPC3-201ENST00000281589 KCNH8Q96L42 1107 aa12.47□□□□□ -0.41
PABPC3-201ENST00000281589 NAP1L2Q9ULW6 460 aaPredicted RBP12.47□□□□□ -0.41
PABPC3-201ENST00000281589 CTTNBP2Q8WZ74 1663 aa12.46□□□□□ -0.41
PABPC3-201ENST00000281589 PLPPR3Q6T4P5 718 aa12.46□□□□□ -0.41
PABPC3-201ENST00000281589 AQRO60306 1485 aaKnown RBP eCLIP12.46□□□□□ -0.42
PABPC3-201ENST00000281589 EFCAB5A4FU69 1503 aa12.46□□□□□ -0.42
PABPC3-201ENST00000281589 RSPH4AQ5TD94 716 aa12.46□□□□□ -0.42
PABPC3-201ENST00000281589 CASKIN1Q8WXD9 1431 aa12.45□□□□□ -0.42
PABPC3-201ENST00000281589 CUL7Q14999 1698 aa12.45□□□□□ -0.42
PABPC3-201ENST00000281589 FBLN2P98095 1184 aa12.44□□□□□ -0.42
PABPC3-201ENST00000281589 HSP90AA2PQ14568 343 aaPredicted RBP12.44□□□□□ -0.42
PABPC3-201ENST00000281589 CHMP4AQ9BY43 222 aa12.44□□□□□ -0.42
PABPC3-201ENST00000281589 CHMP4BQ9H444 224 aaKnown RBP12.44□□□□□ -0.42
PABPC3-201ENST00000281589 LAMC3Q9Y6N6 1575 aa12.43□□□□□ -0.42
PABPC3-201ENST00000281589 RRP7BPQ9NSQ0 103 aa12.43□□□□□ -0.42
PABPC3-201ENST00000281589 DDX10Q13206 875 aaKnown RBP12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms