RNA–Protein interactions for RNA: ENST00000278302.9

TRIM6-201, Transcript of tripartite motif containing 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM6, Length 3,217 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-201ENST00000278302 ATP1B4Q9UN42 357 aaPredicted RBP10.94□□□□□ -0.66
TRIM6-201ENST00000278302 P3H3Q8IVL6 736 aa10.93□□□□□ -0.66
TRIM6-201ENST00000278302 DHX57Q6P158 1386 aaKnown RBP10.93□□□□□ -0.66
TRIM6-201ENST00000278302 CCNB3Q8WWL7 1395 aa10.93□□□□□ -0.66
TRIM6-201ENST00000278302 RRBP1Q9P2E9 1410 aaKnown RBP10.93□□□□□ -0.66
TRIM6-201ENST00000278302 FKBP8Q14318 412 aa10.9□□□□□ -0.66
TRIM6-201ENST00000278302 MSH5O43196 834 aa10.9□□□□□ -0.67
TRIM6-201ENST00000278302 RAD54L2Q9Y4B4 1467 aa10.89□□□□□ -0.67
TRIM6-201ENST00000278302 KCNH8Q96L42 1107 aa10.88□□□□□ -0.67
TRIM6-201ENST00000278302 NESP48681 1621 aa10.87□□□□□ -0.67
TRIM6-201ENST00000278302 DNMBPQ6XZF7 1577 aa10.87□□□□□ -0.67
TRIM6-201ENST00000278302 FAM50AQ14320 339 aaKnown RBP10.86□□□□□ -0.67
TRIM6-201ENST00000278302 FHAD1B1AJZ9 1412 aa10.86□□□□□ -0.67
TRIM6-201ENST00000278302 TIAM1Q13009 1591 aa10.86□□□□□ -0.67
TRIM6-201ENST00000278302 TOPBP1Q92547 1522 aa10.85□□□□□ -0.67
TRIM6-201ENST00000278302 ANO8Q9HCE9 1232 aaPredicted RBP10.85□□□□□ -0.67
TRIM6-201ENST00000278302 ERICH6Q7L0X2 663 aa10.85□□□□□ -0.67
TRIM6-201ENST00000278302 POLA1P09884 1462 aaPredicted RBP10.84□□□□□ -0.67
TRIM6-201ENST00000278302 MAP3K1Q13233 1512 aa10.84□□□□□ -0.67
TRIM6-201ENST00000278302 ABCA10Q8WWZ4 1543 aa10.84□□□□□ -0.67
TRIM6-201ENST00000278302 LRRC9Q6ZRR7 1453 aa10.83□□□□□ -0.68
TRIM6-201ENST00000278302 RAB3GAP2Q9H2M9 1393 aa10.82□□□□□ -0.68
TRIM6-201ENST00000278302 FHOD3Q2V2M9 1422 aa10.82□□□□□ -0.68
TRIM6-201ENST00000278302 PHLDB1Q86UU1 1377 aa10.8□□□□□ -0.68
TRIM6-201ENST00000278302 SETD5Q9C0A6 1442 aa10.79□□□□□ -0.68
TRIM6-201ENST00000278302 PCF11O94913 1555 aaKnown RBP10.79□□□□□ -0.68
TRIM6-201ENST00000278302 TDRD9Q8NDG6 1382 aaKnown RBP10.78□□□□□ -0.68
TRIM6-201ENST00000278302 CUL7Q14999 1698 aa10.78□□□□□ -0.68
TRIM6-201ENST00000278302 LAMC3Q9Y6N6 1575 aa10.77□□□□□ -0.69
TRIM6-201ENST00000278302 EFCAB5A4FU69 1503 aa10.76□□□□□ -0.69
TRIM6-201ENST00000278302 URB2Q14146 1524 aaKnown RBP10.76□□□□□ -0.69
TRIM6-201ENST00000278302 DEKP35659 375 aaKnown RBP10.76□□□□□ -0.69
TRIM6-201ENST00000278302 CFAP43Q8NDM7 1665 aa10.75□□□□□ -0.69
TRIM6-201ENST00000278302 FYCO1Q9BQS8 1478 aa10.75□□□□□ -0.69
TRIM6-201ENST00000278302 CASKIN1Q8WXD9 1431 aa10.75□□□□□ -0.69
TRIM6-201ENST00000278302 PDS5BQ9NTI5 1447 aa10.75□□□□□ -0.69
TRIM6-201ENST00000278302 FMN1Q68DA7 1419 aa10.74□□□□□ -0.69
TRIM6-201ENST00000278302 NEFLP07196 543 aa10.74□□□□□ -0.69
TRIM6-201ENST00000278302 CTTNBP2Q8WZ74 1663 aa10.74□□□□□ -0.69
TRIM6-201ENST00000278302 GAPVD1Q14C86 1478 aa10.73□□□□□ -0.69
TRIM6-201ENST00000278302 DNAJC5BQ9UF47 199 aa10.73□□□□□ -0.69
TRIM6-201ENST00000278302 SIN3AQ96ST3 1273 aa10.72□□□□□ -0.69
TRIM6-201ENST00000278302 MTUS2Q5JR59 1369 aa10.72□□□□□ -0.69
TRIM6-201ENST00000278302 SALL2Q9Y467 1007 aaPredicted RBP10.72□□□□□ -0.69
TRIM6-201ENST00000278302 AQRO60306 1485 aaKnown RBP eCLIP10.72□□□□□ -0.699e-8■■□□□ 11.9
TRIM6-201ENST00000278302 CCDC136Q96JN2 1154 aa10.71□□□□□ -0.69
TRIM6-201ENST00000278302 MAPKBP1O60336 1514 aa10.71□□□□□ -0.7
TRIM6-201ENST00000278302 TRIM52Q96A61 297 aa10.69□□□□□ -0.7
TRIM6-201ENST00000278302 WDR97A6NE52 1622 aa10.69□□□□□ -0.7
TRIM6-201ENST00000278302 ABCA5Q8WWZ7 1642 aa10.68□□□□□ -0.7
TRIM6-201ENST00000278302 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.67□□□□□ -0.7
TRIM6-201ENST00000278302 FGD6Q6ZV73 1430 aa10.67□□□□□ -0.7
TRIM6-201ENST00000278302 FANCIQ9NVI1 1328 aa10.66□□□□□ -0.7
TRIM6-201ENST00000278302 NBR1Q14596 966 aa10.66□□□□□ -0.7
TRIM6-201ENST00000278302 KIF21AQ7Z4S6 1674 aa10.66□□□□□ -0.7
TRIM6-201ENST00000278302 SNAPC4Q5SXM2 1469 aa10.66□□□□□ -0.7
TRIM6-201ENST00000278302 IRX6P78412 446 aaPredicted RBP10.64□□□□□ -0.71
TRIM6-201ENST00000278302 TIMELESSQ9UNS1 1208 aa10.64□□□□□ -0.71
TRIM6-201ENST00000278302 SAMD9Q5K651 1589 aa10.64□□□□□ -0.71
TRIM6-201ENST00000278302 DDX10Q13206 875 aaKnown RBP10.62□□□□□ -0.71
TRIM6-201ENST00000278302 NCOA2Q15596 1464 aa10.62□□□□□ -0.71
TRIM6-201ENST00000278302 RTN4Q9NQC3 1192 aaKnown RBP10.62□□□□□ -0.71
TRIM6-201ENST00000278302 GRIN2BQ13224 1484 aa10.61□□□□□ -0.71
TRIM6-201ENST00000278302 PPP1R15AO75807 674 aaPredicted RBP10.61□□□□□ -0.71
TRIM6-201ENST00000278302 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.61□□□□□ -0.71
TRIM6-201ENST00000278302 CDK11AQ9UQ88 783 aaPredicted RBP10.61□□□□□ -0.71
TRIM6-201ENST00000278302 MYOM3Q5VTT5 1437 aa10.6□□□□□ -0.71
TRIM6-201ENST00000278302 HIRIP3Q9BW71 556 aaPredicted RBP10.6□□□□□ -0.71
TRIM6-201ENST00000278302 CCDC18Q5T9S5 1454 aa10.6□□□□□ -0.71
TRIM6-201ENST00000278302 TARBP1Q13395 1621 aaKnown RBP10.6□□□□□ -0.71
TRIM6-201ENST00000278302 TONSLQ96HA7 1378 aa10.6□□□□□ -0.71
TRIM6-201ENST00000278302 ARID3CA6NKF2 412 aa10.6□□□□□ -0.71
TRIM6-201ENST00000278302 SUPT6HQ7KZ85 1726 aaKnown RBP10.59□□□□□ -0.71
TRIM6-201ENST00000278302 CHIC2Q9UKJ5 165 aa10.59□□□□□ -0.71
TRIM6-201ENST00000278302 PTPRKQ15262 1439 aa10.59□□□□□ -0.71
TRIM6-201ENST00000278302 MYT1LQ9UL68 1186 aa10.58□□□□□ -0.72
TRIM6-201ENST00000278302 LRRIQ1Q96JM4 1722 aa10.58□□□□□ -0.72
TRIM6-201ENST00000278302 EHBP1L1Q8N3D4 1523 aa10.58□□□□□ -0.72
TRIM6-201ENST00000278302 THOC2Q8NI27 1593 aaKnown RBP10.58□□□□□ -0.72
TRIM6-201ENST00000278302 HFM1A2PYH4 1435 aa10.58□□□□□ -0.72
TRIM6-201ENST00000278302 IL27Q8NEV9 243 aa10.58□□□□□ -0.72
TRIM6-201ENST00000278302 RRP7BPQ9NSQ0 103 aa10.58□□□□□ -0.72
TRIM6-201ENST00000278302 UACAQ9BZF9 1416 aa10.57□□□□□ -0.72
TRIM6-201ENST00000278302 PBRM1Q86U86 1689 aa10.56□□□□□ -0.72
TRIM6-201ENST00000278302 MRC2Q9UBG0 1479 aa10.56□□□□□ -0.72
TRIM6-201ENST00000278302 PTPN23Q9H3S7 1636 aa10.56□□□□□ -0.72
TRIM6-201ENST00000278302 NAIPQ13075 1403 aa10.55□□□□□ -0.72
TRIM6-201ENST00000278302 IQGAP2Q13576 1575 aa10.55□□□□□ -0.72
TRIM6-201ENST00000278302 UGGT2Q9NYU1 1516 aa10.54□□□□□ -0.72
TRIM6-201ENST00000278302 HECW1Q76N89 1606 aa10.54□□□□□ -0.72
TRIM6-201ENST00000278302 PAK3O75914 559 aaPredicted RBP10.54□□□□□ -0.72
TRIM6-201ENST00000278302 MAGI3Q5TCQ9 1506 aa10.53□□□□□ -0.72
TRIM6-201ENST00000278302 EPRSP07814 1512 aaKnown RBP10.52□□□□□ -0.72
TRIM6-201ENST00000278302 ANP32CO43423 234 aa10.52□□□□□ -0.72
TRIM6-201ENST00000278302 ADAMTS12P58397 1594 aa10.52□□□□□ -0.72
TRIM6-201ENST00000278302 CDK13Q14004 1512 aaKnown RBP10.5□□□□□ -0.73
TRIM6-201ENST00000278302 NOP58Q9Y2X3 529 aaKnown RBP10.5□□□□□ -0.73
TRIM6-201ENST00000278302 IFT140Q96RY7 1462 aa10.5□□□□□ -0.73
TRIM6-201ENST00000278302 ZNF608Q9ULD9 1512 aaPredicted RBP10.5□□□□□ -0.73
TRIM6-201ENST00000278302 ARHGEF11O15085 1522 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 344.4 ms