RNA–Protein interactions for RNA: ENST00000274170.8

CDH18-201, Transcript of cadherin 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH18, Length 2,809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH18-201ENST00000274170 CTTNBP2Q8WZ74 1663 aa12.6□□□□□ -0.39
CDH18-201ENST00000274170 CARMIL1Q5VZK9 1371 aa12.59□□□□□ -0.39
CDH18-201ENST00000274170 RAPGEF2Q9Y4G8 1499 aa12.58□□□□□ -0.4
CDH18-201ENST00000274170 PRXQ9BXM0 1461 aa12.56□□□□□ -0.4
CDH18-201ENST00000274170 IQGAP2Q13576 1575 aa12.55□□□□□ -0.4
CDH18-201ENST00000274170 TRIM41Q8WV44 630 aa12.54□□□□□ -0.4
CDH18-201ENST00000274170 UGGT2Q9NYU1 1516 aa12.54□□□□□ -0.4
CDH18-201ENST00000274170 ERCC6L2Q5T890 1561 aa12.52□□□□□ -0.41
CDH18-201ENST00000274170 KIF21BO75037 1637 aa12.51□□□□□ -0.41
CDH18-201ENST00000274170 PRG4Q92954 1404 aaPredicted RBP12.49□□□□□ -0.41
CDH18-201ENST00000274170 JPH4Q96JJ6 628 aa12.48□□□□□ -0.41
CDH18-201ENST00000274170 PPARGC1BQ86YN6 1023 aaKnown RBP12.47□□□□□ -0.41
CDH18-201ENST00000274170 KIAA0556O60303 1618 aa12.45□□□□□ -0.42
CDH18-201ENST00000274170 CARMIL2Q6F5E8 1435 aa12.44□□□□□ -0.42
CDH18-201ENST00000274170 DISP1Q96F81 1524 aa12.44□□□□□ -0.42
CDH18-201ENST00000274170 UHRF1BP1LA0JNW5 1464 aa12.43□□□□□ -0.42
CDH18-201ENST00000274170 GOLGA3Q08378 1498 aa12.43□□□□□ -0.42
CDH18-201ENST00000274170 ADCY10Q96PN6 1610 aa12.42□□□□□ -0.42
CDH18-201ENST00000274170 MAPKBP1O60336 1514 aa12.41□□□□□ -0.42
CDH18-201ENST00000274170 SAMD9Q5K651 1589 aa12.41□□□□□ -0.42
CDH18-201ENST00000274170 CYB5RLQ6IPT4 315 aa12.41□□□□□ -0.42
CDH18-201ENST00000274170 CSRNP3Q8WYN3 585 aa12.41□□□□□ -0.42
CDH18-201ENST00000274170 CHIC1Q5VXU3 224 aa12.4□□□□□ -0.42
CDH18-201ENST00000274170 TNIKQ9UKE5 1360 aa12.4□□□□□ -0.42
CDH18-201ENST00000274170 PCGF6Q9BYE7 350 aa12.37□□□□□ -0.43
CDH18-201ENST00000274170 KIF13AQ9H1H9 1805 aa12.36□□□□□ -0.43
CDH18-201ENST00000274170 EFCAB5A4FU69 1503 aa12.35□□□□□ -0.43
CDH18-201ENST00000274170 ABCC2Q92887 1545 aa12.35□□□□□ -0.43
CDH18-201ENST00000274170 ABCA8O94911 1581 aa12.34□□□□□ -0.43
CDH18-201ENST00000274170 PTPRGP23470 1445 aa12.34□□□□□ -0.43
CDH18-201ENST00000274170 KDM5BQ9UGL1 1544 aa12.32□□□□□ -0.44
CDH18-201ENST00000274170 UACAQ9BZF9 1416 aa12.31□□□□□ -0.44
CDH18-201ENST00000274170 GLI2P10070 1586 aa12.31□□□□□ -0.44
CDH18-201ENST00000274170 ZCCHC11Q5TAX3 1644 aaKnown RBP12.29□□□□□ -0.44
CDH18-201ENST00000274170 DIP2BQ9P265 1576 aa12.29□□□□□ -0.44
CDH18-201ENST00000274170 ABCC10Q5T3U5 1492 aa12.27□□□□□ -0.44
CDH18-201ENST00000274170 PLB1Q6P1J6 1458 aa12.25□□□□□ -0.45
CDH18-201ENST00000274170 RAPGEF6Q8TEU7 1601 aa12.25□□□□□ -0.45
CDH18-201ENST00000274170 SCAF1Q9H7N4 1312 aaKnown RBP12.23□□□□□ -0.45
CDH18-201ENST00000274170 MYT1Q01538 1121 aa12.23□□□□□ -0.45
CDH18-201ENST00000274170 MAP3K4Q9Y6R4 1608 aa12.22□□□□□ -0.45
CDH18-201ENST00000274170 NPM1P06748 294 aaKnown RBP eCLIP12.21□□□□□ -0.45
CDH18-201ENST00000274170 CFAP43Q8NDM7 1665 aa12.2□□□□□ -0.46
CDH18-201ENST00000274170 PPRC1Q5VV67 1664 aaKnown RBP12.19□□□□□ -0.46
CDH18-201ENST00000274170 FAM9AQ8IZU1 332 aaPredicted RBP12.18□□□□□ -0.46
CDH18-201ENST00000274170 ASXL2Q76L83 1435 aa12.18□□□□□ -0.46
CDH18-201ENST00000274170 WDR7Q9Y4E6 1490 aa12.16□□□□□ -0.46
CDH18-201ENST00000274170 EPRSP07814 1512 aaKnown RBP12.16□□□□□ -0.46
CDH18-201ENST00000274170 ARHGAP35Q9NRY4 1499 aa12.14□□□□□ -0.47
CDH18-201ENST00000274170 HECW1Q76N89 1606 aa12.14□□□□□ -0.47
CDH18-201ENST00000274170 FMN1Q68DA7 1419 aa12.14□□□□□ -0.47
CDH18-201ENST00000274170 ABCA9Q8IUA7 1624 aa12.14□□□□□ -0.47
CDH18-201ENST00000274170 ATP10BO94823 1461 aa12.13□□□□□ -0.47
CDH18-201ENST00000274170 NUP153P49790 1475 aaKnown RBP12.13□□□□□ -0.47
CDH18-201ENST00000274170 TRHP20396 242 aaPredicted RBP12.11□□□□□ -0.47
CDH18-201ENST00000274170 MAGI3Q5TCQ9 1506 aa12.11□□□□□ -0.47
CDH18-201ENST00000274170 FHOD3Q2V2M9 1422 aa12.1□□□□□ -0.47
CDH18-201ENST00000274170 TEX14Q8IWB6 1497 aa12.1□□□□□ -0.47
CDH18-201ENST00000274170 LRRIQ1Q96JM4 1722 aa12.1□□□□□ -0.47
CDH18-201ENST00000274170 TSPOAP1O95153 1857 aa12.08□□□□□ -0.48
CDH18-201ENST00000274170 CFAP74Q9C0B2 1584 aa12.06□□□□□ -0.48
CDH18-201ENST00000274170 PHLDB1Q86UU1 1377 aa12.06□□□□□ -0.48
CDH18-201ENST00000274170 CCDC18Q5T9S5 1454 aa12.06□□□□□ -0.48
CDH18-201ENST00000274170 FYCO1Q9BQS8 1478 aa12.06□□□□□ -0.48
CDH18-201ENST00000274170 FAM69CQ0P6D2 419 aa12.06□□□□□ -0.48
CDH18-201ENST00000274170 CASKIN1Q8WXD9 1431 aa12.05□□□□□ -0.48
CDH18-201ENST00000274170 KDM6BO15054 1643 aa12.05□□□□□ -0.48
CDH18-201ENST00000274170 UBTFP17480 764 aaKnown RBP12.05□□□□□ -0.48
CDH18-201ENST00000274170 ARAP3Q8WWN8 1544 aa12.05□□□□□ -0.48
CDH18-201ENST00000274170 TRIM26Q12899 539 aaPredicted RBP12.03□□□□□ -0.48
CDH18-201ENST00000274170 PCF11O94913 1555 aaKnown RBP12.03□□□□□ -0.48
CDH18-201ENST00000274170 CLIP1P30622 1438 aa12.01□□□□□ -0.49
CDH18-201ENST00000274170 ZEB1P37275 1124 aaPredicted RBP12.01□□□□□ -0.49
CDH18-201ENST00000274170 NEO1Q92859 1461 aa12□□□□□ -0.49
CDH18-201ENST00000274170 MYO5CQ9NQX4 1742 aa12□□□□□ -0.49
CDH18-201ENST00000274170 P3H3Q8IVL6 736 aa11.99□□□□□ -0.49
CDH18-201ENST00000274170 CD109Q6YHK3 1445 aa11.99□□□□□ -0.49
CDH18-201ENST00000274170 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.98□□□□□ -0.49
CDH18-201ENST00000274170 KIF14Q15058 1648 aa11.98□□□□□ -0.49
CDH18-201ENST00000274170 CDK13Q14004 1512 aaKnown RBP11.97□□□□□ -0.49
CDH18-201ENST00000274170 TTBK1Q5TCY1 1321 aaPredicted RBP11.96□□□□□ -0.49
CDH18-201ENST00000274170 TTC37Q6PGP7 1564 aa11.96□□□□□ -0.5
CDH18-201ENST00000274170 TROQ12816 1431 aaPredicted RBP11.95□□□□□ -0.5
CDH18-201ENST00000274170 CEP162Q5TB80 1403 aa11.95□□□□□ -0.5
CDH18-201ENST00000274170 MAP3K1Q13233 1512 aa11.95□□□□□ -0.5
CDH18-201ENST00000274170 PLEKHD1A6NEE1 506 aa11.94□□□□□ -0.5
CDH18-201ENST00000274170 RICTORQ6R327 1708 aa11.94□□□□□ -0.5
CDH18-201ENST00000274170 PREX2Q70Z35 1606 aa11.93□□□□□ -0.5
CDH18-201ENST00000274170 CDK11AQ9UQ88 783 aaPredicted RBP11.93□□□□□ -0.5
CDH18-201ENST00000274170 ZMYM4Q5VZL5 1548 aa11.92□□□□□ -0.5
CDH18-201ENST00000274170 CDC42BPBQ9Y5S2 1711 aa11.92□□□□□ -0.5
CDH18-201ENST00000274170 CDC42BPAQ5VT25 1732 aa11.91□□□□□ -0.5
CDH18-201ENST00000274170 PLCH2O75038 1416 aa11.91□□□□□ -0.5
CDH18-201ENST00000274170 FRMPD1Q5SYB0 1578 aa11.91□□□□□ -0.5
CDH18-201ENST00000274170 COL17A1Q9UMD9 1497 aaPredicted RBP11.9□□□□□ -0.51
CDH18-201ENST00000274170 EHBP1L1Q8N3D4 1523 aa11.89□□□□□ -0.51
CDH18-201ENST00000274170 ITSN2Q9NZM3 1697 aa11.88□□□□□ -0.51
CDH18-201ENST00000274170 ACIN1Q9UKV3 1341 aaKnown RBP11.88□□□□□ -0.51
CDH18-201ENST00000274170 VPS8Q8N3P4 1428 aa11.87□□□□□ -0.51
CDH18-201ENST00000274170 FANCAO15360 1455 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms