RNA–Protein interactions for RNA: ENST00000273582.9

RUBCN-201, Transcript of RUN and cysteine rich domain containing beclin 1 interacting protein, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene RUBCN, Length 6,955 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUBCN-201ENST00000273582 PDS5BQ9NTI5 1447 aa14.04□□□□□ -0.16
RUBCN-201ENST00000273582 GTF3C3Q9Y5Q9 886 aa14.04□□□□□ -0.16
RUBCN-201ENST00000273582 CCER2I3L3R5 266 aa14.02□□□□□ -0.16
RUBCN-201ENST00000273582 FGD5Q6ZNL6 1462 aa14.01□□□□□ -0.17
RUBCN-201ENST00000273582 LRRC9Q6ZRR7 1453 aa13.99□□□□□ -0.17
RUBCN-201ENST00000273582 PPP1R15AO75807 674 aaPredicted RBP13.98□□□□□ -0.17
RUBCN-201ENST00000273582 MIER1Q8N108 512 aa13.98□□□□□ -0.17
RUBCN-201ENST00000273582 FYCO1Q9BQS8 1478 aa13.98□□□□□ -0.17
RUBCN-201ENST00000273582 CCDC18Q5T9S5 1454 aa13.97□□□□□ -0.17
RUBCN-201ENST00000273582 HFM1A2PYH4 1435 aa13.97□□□□□ -0.17
RUBCN-201ENST00000273582 FANCD2Q9BXW9 1451 aa13.97□□□□□ -0.17
RUBCN-201ENST00000273582 RAB3GAP2Q9H2M9 1393 aa13.97□□□□□ -0.17
RUBCN-201ENST00000273582 MTUS2Q5JR59 1369 aa13.96□□□□□ -0.18
RUBCN-201ENST00000273582 ERICH6BQ5W0A0 696 aa13.94□□□□□ -0.18
RUBCN-201ENST00000273582 CDK11AQ9UQ88 783 aaPredicted RBP13.93□□□□□ -0.18
RUBCN-201ENST00000273582 MIA2Q96PC5 1412 aa13.93□□□□□ -0.18
RUBCN-201ENST00000273582 PHLDB1Q86UU1 1377 aa13.92□□□□□ -0.18
RUBCN-201ENST00000273582 TIAM1Q13009 1591 aa13.92□□□□□ -0.18
RUBCN-201ENST00000273582 UACAQ9BZF9 1416 aa13.91□□□□□ -0.18
RUBCN-201ENST00000273582 POLA1P09884 1462 aaPredicted RBP13.91□□□□□ -0.18
RUBCN-201ENST00000273582 FGD6Q6ZV73 1430 aa13.9□□□□□ -0.18
RUBCN-201ENST00000273582 DNMBPQ6XZF7 1577 aa13.88□□□□□ -0.19
RUBCN-201ENST00000273582 MYOM3Q5VTT5 1437 aa13.88□□□□□ -0.19
RUBCN-201ENST00000273582 TOPBP1Q92547 1522 aa13.88□□□□□ -0.19
RUBCN-201ENST00000273582 THOC2Q8NI27 1593 aaKnown RBP13.87□□□□□ -0.19
RUBCN-201ENST00000273582 TONSLQ96HA7 1378 aa13.86□□□□□ -0.19
RUBCN-201ENST00000273582 RANGAP1P46060 587 aaPredicted RBP13.85□□□□□ -0.19
RUBCN-201ENST00000273582 UNC13AQ9UPW8 1703 aa13.81□□□□□ -0.2
RUBCN-201ENST00000273582 DAXXQ9UER7 740 aaPredicted RBP13.78□□□□□ -0.2
RUBCN-201ENST00000273582 ROCK1Q13464 1354 aa13.78□□□□□ -0.2
RUBCN-201ENST00000273582 LAMC3Q9Y6N6 1575 aa13.78□□□□□ -0.2
RUBCN-201ENST00000273582 ARID4BQ4LE39 1312 aaPredicted RBP13.77□□□□□ -0.21
RUBCN-201ENST00000273582 NAIPQ13075 1403 aa13.76□□□□□ -0.21
RUBCN-201ENST00000273582 FHOD3Q2V2M9 1422 aa13.76□□□□□ -0.21
RUBCN-201ENST00000273582 CC2D2AQ9P2K1 1620 aa13.76□□□□□ -0.21
RUBCN-201ENST00000273582 GAPVD1Q14C86 1478 aa13.76□□□□□ -0.21
RUBCN-201ENST00000273582 ANP32CO43423 234 aa13.75□□□□□ -0.21
RUBCN-201ENST00000273582 FAM50AQ14320 339 aaKnown RBP13.74□□□□□ -0.21
RUBCN-201ENST00000273582 TDRD9Q8NDG6 1382 aaKnown RBP13.74□□□□□ -0.21
RUBCN-201ENST00000273582 KIAA0586Q9BVV6 1533 aa13.72□□□□□ -0.21
RUBCN-201ENST00000273582 SNAPC4Q5SXM2 1469 aa13.71□□□□□ -0.21
RUBCN-201ENST00000273582 ATP1B4Q9UN42 357 aaPredicted RBP13.7□□□□□ -0.22
RUBCN-201ENST00000273582 RSPH4AQ5TD94 716 aa13.7□□□□□ -0.22
RUBCN-201ENST00000273582 MAPKBP1O60336 1514 aa13.7□□□□□ -0.22
RUBCN-201ENST00000273582 CUL7Q14999 1698 aa13.69□□□□□ -0.22
RUBCN-201ENST00000273582 TCOF1Q13428 1488 aaKnown RBP13.69□□□□□ -0.22
RUBCN-201ENST00000273582 NCOA2Q15596 1464 aa13.69□□□□□ -0.22
RUBCN-201ENST00000273582 EIF4G2P78344 907 aaKnown RBP eCLIP13.68□□□□□ -0.22
RUBCN-201ENST00000273582 GRIN2BQ13224 1484 aa13.68□□□□□ -0.22
RUBCN-201ENST00000273582 EHBP1L1Q8N3D4 1523 aa13.66□□□□□ -0.22
RUBCN-201ENST00000273582 ITGAEP38570 1179 aa13.66□□□□□ -0.22
RUBCN-201ENST00000273582 ARHGEF11O15085 1522 aa13.65□□□□□ -0.22
RUBCN-201ENST00000273582 RAD54L2Q9Y4B4 1467 aa13.64□□□□□ -0.23
RUBCN-201ENST00000273582 STAC3Q96MF2 364 aa13.64□□□□□ -0.23
RUBCN-201ENST00000273582 ROCK2O75116 1388 aaKnown RBP13.62□□□□□ -0.23
RUBCN-201ENST00000273582 IFT140Q96RY7 1462 aa13.61□□□□□ -0.23
RUBCN-201ENST00000273582 SUPT16HQ9Y5B9 1047 aaKnown RBP13.61□□□□□ -0.23
RUBCN-201ENST00000273582 KTN1Q86UP2 1357 aaKnown RBP13.61□□□□□ -0.23
RUBCN-201ENST00000273582 URB2Q14146 1524 aaKnown RBP13.6□□□□□ -0.23
RUBCN-201ENST00000273582 DDX10Q13206 875 aaKnown RBP13.59□□□□□ -0.23
RUBCN-201ENST00000273582 TROQ12816 1431 aaPredicted RBP13.59□□□□□ -0.23
RUBCN-201ENST00000273582 CARMIL2Q6F5E8 1435 aa13.59□□□□□ -0.23
RUBCN-201ENST00000273582 SIN3AQ96ST3 1273 aa13.58□□□□□ -0.24
RUBCN-201ENST00000273582 MYT1LQ9UL68 1186 aa13.58□□□□□ -0.24
RUBCN-201ENST00000273582 WDR97A6NE52 1622 aa13.58□□□□□ -0.24
RUBCN-201ENST00000273582 RTL5Q5HYW3 569 aaPredicted RBP13.57□□□□□ -0.24
RUBCN-201ENST00000273582 WASHC2AQ641Q2 1341 aa13.57□□□□□ -0.24
RUBCN-201ENST00000273582 WASHC2CQ9Y4E1 1318 aa13.57□□□□□ -0.24
RUBCN-201ENST00000273582 SAMD9Q5K651 1589 aa13.55□□□□□ -0.24
RUBCN-201ENST00000273582 P3H3Q8IVL6 736 aa13.55□□□□□ -0.24
RUBCN-201ENST00000273582 UGGT2Q9NYU1 1516 aa13.55□□□□□ -0.24
RUBCN-201ENST00000273582 ANKRD30BQ9BXX2 1392 aa13.55□□□□□ -0.24
RUBCN-201ENST00000273582 EPRSP07814 1512 aaKnown RBP13.54□□□□□ -0.24
RUBCN-201ENST00000273582 RPRD2Q5VT52 1461 aaKnown RBP13.53□□□□□ -0.24
RUBCN-201ENST00000273582 SLC24A1O60721 1099 aa13.52□□□□□ -0.24
RUBCN-201ENST00000273582 MPHOSPH9Q99550 1183 aa13.52□□□□□ -0.24
RUBCN-201ENST00000273582 ANKRD30AQ9BXX3 1397 aa13.52□□□□□ -0.24
RUBCN-201ENST00000273582 PTPRKQ15262 1439 aa13.52□□□□□ -0.25
RUBCN-201ENST00000273582 INSRP06213 1382 aa13.52□□□□□ -0.25
RUBCN-201ENST00000273582 MRC2Q9UBG0 1479 aa13.51□□□□□ -0.25
RUBCN-201ENST00000273582 PCF11O94913 1555 aaKnown RBP13.51□□□□□ -0.25
RUBCN-201ENST00000273582 PRKRIP1Q9H875 184 aaPredicted RBP13.5□□□□□ -0.25
RUBCN-201ENST00000273582 CFDP1Q9UEE9 299 aaPredicted RBP13.5□□□□□ -0.25
RUBCN-201ENST00000273582 TSPY4P0CV99 314 aa13.5□□□□□ -0.25
RUBCN-201ENST00000273582 TSPY10P0CW01 314 aa13.5□□□□□ -0.25
RUBCN-201ENST00000273582 PLEKHD1A6NEE1 506 aa13.5□□□□□ -0.25
RUBCN-201ENST00000273582 L3MBTL2Q969R5 705 aa13.5□□□□□ -0.25
RUBCN-201ENST00000273582 NCOA1Q15788 1441 aa13.49□□□□□ -0.25
RUBCN-201ENST00000273582 MAGI1Q96QZ7 1491 aaPredicted RBP13.49□□□□□ -0.25
RUBCN-201ENST00000273582 ABCA5Q8WWZ7 1642 aa13.48□□□□□ -0.25
RUBCN-201ENST00000273582 CFAP43Q8NDM7 1665 aa13.47□□□□□ -0.25
RUBCN-201ENST00000273582 POLR3GLQ9BT43 218 aa13.47□□□□□ -0.25
RUBCN-201ENST00000273582 ZBED9Q6R2W3 1325 aa13.46□□□□□ -0.26
RUBCN-201ENST00000273582 ADGRL2O95490 1459 aa13.46□□□□□ -0.26
RUBCN-201ENST00000273582 SLC4A1APQ9BWU0 796 aaKnown RBP13.45□□□□□ -0.26
RUBCN-201ENST00000273582 CCDC7Q96M83 1385 aa13.45□□□□□ -0.26
RUBCN-201ENST00000273582 CNGB1Q14028 1251 aaPredicted RBP13.44□□□□□ -0.26
RUBCN-201ENST00000273582 NESP48681 1621 aa13.44□□□□□ -0.26
RUBCN-201ENST00000273582 CNTLNQ9NXG0 1405 aa13.44□□□□□ -0.26
RUBCN-201ENST00000273582 SPATA31E1Q6ZUB1 1445 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms