RNA–Protein interactions for RNA: ENST00000273038.7

VGLL4-201, Transcript of vestigial like family member 4, humanhuman

TSL 1 (best) BASIC

Gene VGLL4, Length 3,725 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL4-201ENST00000273038 MTUS2Q5JR59 1369 aa16.62■□□□□ 0.25
VGLL4-201ENST00000273038 PDS5BQ9NTI5 1447 aa16.62■□□□□ 0.25
VGLL4-201ENST00000273038 SENP3Q9H4L4 574 aaPredicted RBP16.61■□□□□ 0.25
VGLL4-201ENST00000273038 RRP7BPQ9NSQ0 103 aa16.61■□□□□ 0.25
VGLL4-201ENST00000273038 IRX6P78412 446 aaPredicted RBP16.6■□□□□ 0.25
VGLL4-201ENST00000273038 DDX10Q13206 875 aaKnown RBP16.58■□□□□ 0.24
VGLL4-201ENST00000273038 PLPPR3Q6T4P5 718 aa16.58■□□□□ 0.24
VGLL4-201ENST00000273038 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.53■□□□□ 0.245e-6■□□□□ 11.2
VGLL4-201ENST00000273038 CDK11AQ9UQ88 783 aaPredicted RBP16.53■□□□□ 0.24
VGLL4-201ENST00000273038 FGD5Q6ZNL6 1462 aa16.51■□□□□ 0.23
VGLL4-201ENST00000273038 SYNJ1O43426 1573 aa16.5■□□□□ 0.23
VGLL4-201ENST00000273038 SUPT16HQ9Y5B9 1047 aaKnown RBP16.5■□□□□ 0.23
VGLL4-201ENST00000273038 SENP3-EIF4A1A0A087X0R7 540 aa16.47■□□□□ 0.23
VGLL4-201ENST00000273038 AQRO60306 1485 aaKnown RBP eCLIP16.47■□□□□ 0.233e-7■■■■■ 36.6
VGLL4-201ENST00000273038 FHOD3Q2V2M9 1422 aa16.46■□□□□ 0.23
VGLL4-201ENST00000273038 ANP32EQ9BTT0 268 aa16.45■□□□□ 0.22
VGLL4-201ENST00000273038 BCL11AQ9H165 835 aa16.45■□□□□ 0.22
VGLL4-201ENST00000273038 IGF1RP08069 1367 aa16.43■□□□□ 0.22
VGLL4-201ENST00000273038 CFTRP13569 1480 aa16.41■□□□□ 0.22
VGLL4-201ENST00000273038 NPM1P06748 294 aaKnown RBP eCLIP16.41■□□□□ 0.22
VGLL4-201ENST00000273038 NBR1Q14596 966 aa16.41■□□□□ 0.22
VGLL4-201ENST00000273038 ANP32CO43423 234 aa16.4■□□□□ 0.22
VGLL4-201ENST00000273038 SLC4A1APQ9BWU0 796 aaKnown RBP16.4■□□□□ 0.22
VGLL4-201ENST00000273038 PLEKHD1A6NEE1 506 aa16.4■□□□□ 0.22
VGLL4-201ENST00000273038 SIN3AQ96ST3 1273 aa16.39■□□□□ 0.21
VGLL4-201ENST00000273038 VPS8Q8N3P4 1428 aa16.37■□□□□ 0.21
VGLL4-201ENST00000273038 CFDP1Q9UEE9 299 aaPredicted RBP16.36■□□□□ 0.21
VGLL4-201ENST00000273038 CUX1P39880 1505 aa16.35■□□□□ 0.21
VGLL4-201ENST00000273038 CHGAP10645 457 aaKnown RBP16.34■□□□□ 0.21
VGLL4-201ENST00000273038 KDM2AQ9Y2K7 1162 aa16.34■□□□□ 0.21
VGLL4-201ENST00000273038 HNRNPUQ00839 825 aaKnown RBP eCLIP16.33■□□□□ 0.21
VGLL4-201ENST00000273038 JPH4Q96JJ6 628 aa16.33■□□□□ 0.2
VGLL4-201ENST00000273038 TSHZ2Q9NRE2 1034 aa16.33■□□□□ 0.2
VGLL4-201ENST00000273038 RTL5Q5HYW3 569 aaPredicted RBP16.32■□□□□ 0.2
VGLL4-201ENST00000273038 FOXD1Q16676 465 aa16.32■□□□□ 0.2
VGLL4-201ENST00000273038 TSPY4P0CV99 314 aa16.31■□□□□ 0.2
VGLL4-201ENST00000273038 TSPY10P0CW01 314 aa16.31■□□□□ 0.2
VGLL4-201ENST00000273038 NPM2Q86SE8 214 aaKnown RBP16.29■□□□□ 0.2
VGLL4-201ENST00000273038 GAPVD1Q14C86 1478 aa16.28■□□□□ 0.2
VGLL4-201ENST00000273038 HMGXB3Q12766 1538 aa16.27■□□□□ 0.2
VGLL4-201ENST00000273038 RGL3Q3MIN7 710 aa16.26■□□□□ 0.19
VGLL4-201ENST00000273038 POLA1P09884 1462 aaPredicted RBP16.25■□□□□ 0.19
VGLL4-201ENST00000273038 CCNB3Q8WWL7 1395 aa16.24■□□□□ 0.19
VGLL4-201ENST00000273038 FAM9BQ8IZU0 186 aa16.24■□□□□ 0.19
VGLL4-201ENST00000273038 TOPBP1Q92547 1522 aa16.23■□□□□ 0.19
VGLL4-201ENST00000273038 TONSLQ96HA7 1378 aa16.22■□□□□ 0.19
VGLL4-201ENST00000273038 FHAD1B1AJZ9 1412 aa16.19■□□□□ 0.18
VGLL4-201ENST00000273038 RBM19Q9Y4C8 960 aaKnown RBP16.18■□□□□ 0.18
VGLL4-201ENST00000273038 SALL2Q9Y467 1007 aaPredicted RBP16.18■□□□□ 0.18
VGLL4-201ENST00000273038 RTN4Q9NQC3 1192 aaKnown RBP16.17■□□□□ 0.18
VGLL4-201ENST00000273038 CYB5RLQ6IPT4 315 aa16.16■□□□□ 0.18
VGLL4-201ENST00000273038 ARAP1Q96P48 1450 aa16.15■□□□□ 0.18
VGLL4-201ENST00000273038 ZNF644Q9H582 1327 aaPredicted RBP16.14■□□□□ 0.17
VGLL4-201ENST00000273038 DAXXQ9UER7 740 aaPredicted RBP16.14■□□□□ 0.17
VGLL4-201ENST00000273038 HNRNPMP52272 730 aaKnown RBP eCLIP16.14■□□□□ 0.172e-6■■■■□ 23.2
VGLL4-201ENST00000273038 TOP2BQ02880 1626 aa16.14■□□□□ 0.17
VGLL4-201ENST00000273038 EIF5BO60841 1220 aaKnown RBP16.13■□□□□ 0.17
VGLL4-201ENST00000273038 PEG3Q9GZU2 1588 aa16.12■□□□□ 0.17
VGLL4-201ENST00000273038 MLECQ14165 292 aa16.09■□□□□ 0.17
VGLL4-201ENST00000273038 ZNF608Q9ULD9 1512 aaPredicted RBP16.09■□□□□ 0.17
VGLL4-201ENST00000273038 URB2Q14146 1524 aaKnown RBP16.08■□□□□ 0.16
VGLL4-201ENST00000273038 KIF21BO75037 1637 aa16.08■□□□□ 0.16
VGLL4-201ENST00000273038 CLSPNQ9HAW4 1339 aa16.07■□□□□ 0.16
VGLL4-201ENST00000273038 FMN1Q68DA7 1419 aa16.07■□□□□ 0.16
VGLL4-201ENST00000273038 TRHP20396 242 aaPredicted RBP16.07■□□□□ 0.16
VGLL4-201ENST00000273038 PRXQ9BXM0 1461 aa16.06■□□□□ 0.16
VGLL4-201ENST00000273038 CARMIL2Q6F5E8 1435 aa16.06■□□□□ 0.16
VGLL4-201ENST00000273038 ARHGAP35Q9NRY4 1499 aa16.05■□□□□ 0.16
VGLL4-201ENST00000273038 RAB3GAP2Q9H2M9 1393 aa16.05■□□□□ 0.16
VGLL4-201ENST00000273038 PRKCSHP14314 528 aaPredicted RBP16.05■□□□□ 0.16
VGLL4-201ENST00000273038 STAG3Q9UJ98 1225 aa16.05■□□□□ 0.16
VGLL4-201ENST00000273038 B4GALNT3Q6L9W6 998 aa16.04■□□□□ 0.16
VGLL4-201ENST00000273038 MRC2Q9UBG0 1479 aa16.03■□□□□ 0.16
VGLL4-201ENST00000273038 ESF1Q9H501 851 aaKnown RBP16.03■□□□□ 0.16
VGLL4-201ENST00000273038 PHLDB1Q86UU1 1377 aa16.01■□□□□ 0.15
VGLL4-201ENST00000273038 ANP32AP39687 249 aaKnown RBP16.01■□□□□ 0.15
VGLL4-201ENST00000273038 GGT6Q6P531 493 aa16.01■□□□□ 0.15
VGLL4-201ENST00000273038 PTPRGP23470 1445 aa15.99■□□□□ 0.15
VGLL4-201ENST00000273038 PLEKHG5O94827 1062 aa15.99■□□□□ 0.15
VGLL4-201ENST00000273038 ARID4BQ4LE39 1312 aaPredicted RBP15.99■□□□□ 0.15
VGLL4-201ENST00000273038 SNAPC4Q5SXM2 1469 aa15.99■□□□□ 0.15
VGLL4-201ENST00000273038 OSCARQ8IYS5 282 aa15.97■□□□□ 0.15
VGLL4-201ENST00000273038 DNMBPQ6XZF7 1577 aa15.97■□□□□ 0.15
VGLL4-201ENST00000273038 GRIN2BQ13224 1484 aa15.97■□□□□ 0.15
VGLL4-201ENST00000273038 ARXQ96QS3 562 aa15.96■□□□□ 0.15
VGLL4-201ENST00000273038 MRS2Q9HD23 443 aa15.96■□□□□ 0.15
VGLL4-201ENST00000273038 PKD2Q13563 968 aa15.95■□□□□ 0.14
VGLL4-201ENST00000273038 CCDC136Q96JN2 1154 aa15.95■□□□□ 0.14
VGLL4-201ENST00000273038 SETD5Q9C0A6 1442 aa15.93■□□□□ 0.14
VGLL4-201ENST00000273038 DEKP35659 375 aaKnown RBP15.93■□□□□ 0.14
VGLL4-201ENST00000273038 LAMC3Q9Y6N6 1575 aa15.92■□□□□ 0.14
VGLL4-201ENST00000273038 PRDM2Q13029 1718 aa15.91■□□□□ 0.14
VGLL4-201ENST00000273038 ZBTB47Q9UFB7 747 aaPredicted RBP15.91■□□□□ 0.14
VGLL4-201ENST00000273038 DCAF11Q8TEB1 546 aa15.91■□□□□ 0.14
VGLL4-201ENST00000273038 LAS1LQ9Y4W2 734 aaKnown RBP15.9■□□□□ 0.14
VGLL4-201ENST00000273038 NUTM2DQ5VT03 806 aaPredicted RBP15.9■□□□□ 0.14
VGLL4-201ENST00000273038 MPHOSPH9Q99550 1183 aa15.89■□□□□ 0.13
VGLL4-201ENST00000273038 ABCA10Q8WWZ4 1543 aa15.88■□□□□ 0.13
VGLL4-201ENST00000273038 PRG4Q92954 1404 aaPredicted RBP15.87■□□□□ 0.13
VGLL4-201ENST00000273038 KIF3BO15066 747 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms