RNA–Protein interactions for RNA: ENST00000272198.10

PPFIA4-201, Transcript of PTPRF interacting protein alpha 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PPFIA4, Length 5,045 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA4-201ENST00000272198 NEFMP07197 916 aa18.1■□□□□ 0.49
PPFIA4-201ENST00000272198 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.08■□□□□ 0.49
PPFIA4-201ENST00000272198 TDRD9Q8NDG6 1382 aaKnown RBP18.08■□□□□ 0.48
PPFIA4-201ENST00000272198 FMN1Q68DA7 1419 aa18.06■□□□□ 0.48
PPFIA4-201ENST00000272198 CCNB3Q8WWL7 1395 aa18.04■□□□□ 0.48
PPFIA4-201ENST00000272198 RAPGEF2Q9Y4G8 1499 aa18.04■□□□□ 0.48
PPFIA4-201ENST00000272198 VPS8Q8N3P4 1428 aa17.99■□□□□ 0.47
PPFIA4-201ENST00000272198 HMGXB3Q12766 1538 aa17.97■□□□□ 0.47
PPFIA4-201ENST00000272198 RRP7BPQ9NSQ0 103 aa17.95■□□□□ 0.46
PPFIA4-201ENST00000272198 MYT1Q01538 1121 aa17.94■□□□□ 0.46
PPFIA4-201ENST00000272198 DAXXQ9UER7 740 aaPredicted RBP17.92■□□□□ 0.46
PPFIA4-201ENST00000272198 ARHGAP35Q9NRY4 1499 aa17.87■□□□□ 0.45
PPFIA4-201ENST00000272198 KANK1Q14678 1352 aa17.86■□□□□ 0.45
PPFIA4-201ENST00000272198 CLSPNQ9HAW4 1339 aa17.86■□□□□ 0.45
PPFIA4-201ENST00000272198 ARID4BQ4LE39 1312 aaPredicted RBP17.86■□□□□ 0.45
PPFIA4-201ENST00000272198 PPP1R15AO75807 674 aaPredicted RBP17.85■□□□□ 0.45
PPFIA4-201ENST00000272198 FGD5Q6ZNL6 1462 aa17.84■□□□□ 0.45
PPFIA4-201ENST00000272198 PLPPR3Q6T4P5 718 aa17.84■□□□□ 0.45
PPFIA4-201ENST00000272198 CC2D2AQ9P2K1 1620 aa17.84■□□□□ 0.45
PPFIA4-201ENST00000272198 CFTRP13569 1480 aa17.83■□□□□ 0.45
PPFIA4-201ENST00000272198 GAPVD1Q14C86 1478 aa17.82■□□□□ 0.44
PPFIA4-201ENST00000272198 EFCAB2Q5VUJ9 269 aa17.81■□□□□ 0.44
PPFIA4-201ENST00000272198 JPH4Q96JJ6 628 aa17.81■□□□□ 0.44
PPFIA4-201ENST00000272198 ZBTB47Q9UFB7 747 aaPredicted RBP17.79■□□□□ 0.44
PPFIA4-201ENST00000272198 EIF4G2P78344 907 aaKnown RBP eCLIP17.79■□□□□ 0.445e-6■■□□□ 11.4
PPFIA4-201ENST00000272198 CDCA8Q53HL2 280 aa17.78■□□□□ 0.44
PPFIA4-201ENST00000272198 RSPH4AQ5TD94 716 aa17.78■□□□□ 0.44
PPFIA4-201ENST00000272198 KDM2AQ9Y2K7 1162 aa17.78■□□□□ 0.44
PPFIA4-201ENST00000272198 CCDC18Q5T9S5 1454 aa17.77■□□□□ 0.44
PPFIA4-201ENST00000272198 SLC24A1O60721 1099 aa17.76■□□□□ 0.43
PPFIA4-201ENST00000272198 MRC2Q9UBG0 1479 aa17.75■□□□□ 0.43
PPFIA4-201ENST00000272198 HDGFP51858 240 aaKnown RBP17.74■□□□□ 0.43
PPFIA4-201ENST00000272198 OSCARQ8IYS5 282 aa17.73■□□□□ 0.43
PPFIA4-201ENST00000272198 TIMELESSQ9UNS1 1208 aa17.73■□□□□ 0.43
PPFIA4-201ENST00000272198 TRHP20396 242 aaPredicted RBP17.73■□□□□ 0.43
PPFIA4-201ENST00000272198 BICRAQ9NZM4 1560 aa17.72■□□□□ 0.43
PPFIA4-201ENST00000272198 CANXP27824 592 aaKnown RBP17.72■□□□□ 0.43
PPFIA4-201ENST00000272198 PTPRGP23470 1445 aa17.69■□□□□ 0.42
PPFIA4-201ENST00000272198 FHOD3Q2V2M9 1422 aa17.69■□□□□ 0.42
PPFIA4-201ENST00000272198 GRIN2BQ13224 1484 aa17.69■□□□□ 0.42
PPFIA4-201ENST00000272198 IGF1RP08069 1367 aa17.69■□□□□ 0.42
PPFIA4-201ENST00000272198 IFT140Q96RY7 1462 aa17.68■□□□□ 0.42
PPFIA4-201ENST00000272198 ANKRD30AQ9BXX3 1397 aa17.68■□□□□ 0.42
PPFIA4-201ENST00000272198 SETD5Q9C0A6 1442 aa17.66■□□□□ 0.42
PPFIA4-201ENST00000272198 RAD54L2Q9Y4B4 1467 aa17.64■□□□□ 0.41
PPFIA4-201ENST00000272198 DDX10Q13206 875 aaKnown RBP17.64■□□□□ 0.41
PPFIA4-201ENST00000272198 RGL3Q3MIN7 710 aa17.63■□□□□ 0.41
PPFIA4-201ENST00000272198 TMC1Q8TDI8 760 aa17.62■□□□□ 0.41
PPFIA4-201ENST00000272198 LAMC3Q9Y6N6 1575 aa17.61■□□□□ 0.41
PPFIA4-201ENST00000272198 WDR43Q15061 677 aaKnown RBP eCLIP17.6■□□□□ 0.41
PPFIA4-201ENST00000272198 C14orf37Q86TY3 774 aa17.58■□□□□ 0.41
PPFIA4-201ENST00000272198 CARD11Q9BXL7 1154 aa17.58■□□□□ 0.4
PPFIA4-201ENST00000272198 KANK4Q5T7N3 995 aaPredicted RBP17.57■□□□□ 0.4
PPFIA4-201ENST00000272198 TOPBP1Q92547 1522 aa17.56■□□□□ 0.4
PPFIA4-201ENST00000272198 ERICH3Q5RHP9 1530 aa17.56■□□□□ 0.4
PPFIA4-201ENST00000272198 DNMBPQ6XZF7 1577 aa17.56■□□□□ 0.4
PPFIA4-201ENST00000272198 RUSC2Q8N2Y8 1516 aa17.55■□□□□ 0.4
PPFIA4-201ENST00000272198 PEG3Q9GZU2 1588 aa17.55■□□□□ 0.4
PPFIA4-201ENST00000272198 SPAG9O60271 1321 aaKnown RBP17.54■□□□□ 0.4
PPFIA4-201ENST00000272198 AQRO60306 1485 aaKnown RBP eCLIP17.54■□□□□ 0.42e-6■■■■□ 23.8
PPFIA4-201ENST00000272198 TOP2BQ02880 1626 aa17.53■□□□□ 0.4
PPFIA4-201ENST00000272198 NESP48681 1621 aa17.52■□□□□ 0.4
PPFIA4-201ENST00000272198 CFAP53Q96M91 514 aa17.51■□□□□ 0.39
PPFIA4-201ENST00000272198 POGKQ9P215 609 aa17.51■□□□□ 0.39
PPFIA4-201ENST00000272198 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.5■□□□□ 0.39
PPFIA4-201ENST00000272198 KIF21BO75037 1637 aa17.5■□□□□ 0.39
PPFIA4-201ENST00000272198 MRS2Q9HD23 443 aa17.49■□□□□ 0.39
PPFIA4-201ENST00000272198 GGT6Q6P531 493 aa17.49■□□□□ 0.39
PPFIA4-201ENST00000272198 KNSTRNQ9Y448 316 aa17.48■□□□□ 0.39
PPFIA4-201ENST00000272198 HNRNPUQ00839 825 aaKnown RBP eCLIP17.48■□□□□ 0.39
PPFIA4-201ENST00000272198 NUP155O75694 1391 aa17.47■□□□□ 0.39
PPFIA4-201ENST00000272198 POLA1P09884 1462 aaPredicted RBP17.47■□□□□ 0.39
PPFIA4-201ENST00000272198 FAM9BQ8IZU0 186 aa17.46■□□□□ 0.39
PPFIA4-201ENST00000272198 PKD2Q13563 968 aa17.46■□□□□ 0.39
PPFIA4-201ENST00000272198 SYNJ1O43426 1573 aa17.45■□□□□ 0.38
PPFIA4-201ENST00000272198 MLECQ14165 292 aa17.45■□□□□ 0.38
PPFIA4-201ENST00000272198 CUX1P39880 1505 aa17.44■□□□□ 0.38
PPFIA4-201ENST00000272198 EFCAB5A4FU69 1503 aa17.43■□□□□ 0.38
PPFIA4-201ENST00000272198 TMF1P82094 1093 aa17.43■□□□□ 0.38
PPFIA4-201ENST00000272198 DCAF11Q8TEB1 546 aa17.42■□□□□ 0.38
PPFIA4-201ENST00000272198 KIF3BO15066 747 aa17.41■□□□□ 0.38
PPFIA4-201ENST00000272198 SCAF1Q9H7N4 1312 aaKnown RBP17.41■□□□□ 0.38
PPFIA4-201ENST00000272198 HNRNPMP52272 730 aaKnown RBP eCLIP17.41■□□□□ 0.38
PPFIA4-201ENST00000272198 RAB3GAP2Q9H2M9 1393 aa17.4■□□□□ 0.38
PPFIA4-201ENST00000272198 CYB5RLQ6IPT4 315 aa17.4■□□□□ 0.38
PPFIA4-201ENST00000272198 MPHOSPH9Q99550 1183 aa17.4■□□□□ 0.38
PPFIA4-201ENST00000272198 SIN3AQ96ST3 1273 aa17.4■□□□□ 0.38
PPFIA4-201ENST00000272198 CASKIN1Q8WXD9 1431 aa17.39■□□□□ 0.37
PPFIA4-201ENST00000272198 UNC13AQ9UPW8 1703 aa17.39■□□□□ 0.37
PPFIA4-201ENST00000272198 MYOM3Q5VTT5 1437 aa17.37■□□□□ 0.37
PPFIA4-201ENST00000272198 ABCA10Q8WWZ4 1543 aa17.37■□□□□ 0.37
PPFIA4-201ENST00000272198 HAP1P54257 671 aaPredicted RBP17.37■□□□□ 0.37
PPFIA4-201ENST00000272198 SYNJ2O15056 1496 aa17.36■□□□□ 0.37
PPFIA4-201ENST00000272198 NUDCQ9Y266 331 aa17.36■□□□□ 0.37
PPFIA4-201ENST00000272198 WASHC2CQ9Y4E1 1318 aa17.35■□□□□ 0.37
PPFIA4-201ENST00000272198 PRXQ9BXM0 1461 aa17.35■□□□□ 0.37
PPFIA4-201ENST00000272198 GTF3C3Q9Y5Q9 886 aa17.34■□□□□ 0.37
PPFIA4-201ENST00000272198 EIF3AQ14152 1382 aaKnown RBP17.34■□□□□ 0.37
PPFIA4-201ENST00000272198 SNAPC4Q5SXM2 1469 aa17.33■□□□□ 0.37
PPFIA4-201ENST00000272198 FYCO1Q9BQS8 1478 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms