RNA–Protein interactions for RNA: ENST00000272102.9

ARF1-201, Transcript of ADP ribosylation factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ARF1, Length 1,888 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARF1-201ENST00000272102 ERCC6L2Q5T890 1561 aa17.76■□□□□ 0.43
ARF1-201ENST00000272102 ARHGEF11O15085 1522 aa17.76■□□□□ 0.43
ARF1-201ENST00000272102 KIAA0586Q9BVV6 1533 aa17.76■□□□□ 0.43
ARF1-201ENST00000272102 KIF21BO75037 1637 aa17.76■□□□□ 0.43
ARF1-201ENST00000272102 RIMBP3CA6NJZ7 1639 aa17.74■□□□□ 0.43
ARF1-201ENST00000272102 RIMBP3BA6NNM3 1639 aa17.74■□□□□ 0.43
ARF1-201ENST00000272102 RIMBP3Q9UFD9 1639 aa17.74■□□□□ 0.43
ARF1-201ENST00000272102 JPH4Q96JJ6 628 aa17.73■□□□□ 0.43
ARF1-201ENST00000272102 IQGAP2Q13576 1575 aa17.72■□□□□ 0.43
ARF1-201ENST00000272102 SHROOM2Q13796 1616 aa17.72■□□□□ 0.43
ARF1-201ENST00000272102 MYT1Q01538 1121 aa17.71■□□□□ 0.43
ARF1-201ENST00000272102 HRCP23327 699 aa17.71■□□□□ 0.43
ARF1-201ENST00000272102 CTTNBP2Q8WZ74 1663 aa17.7■□□□□ 0.42
ARF1-201ENST00000272102 PRG4Q92954 1404 aaPredicted RBP17.7■□□□□ 0.42
ARF1-201ENST00000272102 RANGAP1P46060 587 aaPredicted RBP17.69■□□□□ 0.42
ARF1-201ENST00000272102 GOLGA3Q08378 1498 aa17.68■□□□□ 0.42
ARF1-201ENST00000272102 UBTFP17480 764 aaKnown RBP17.67■□□□□ 0.42
ARF1-201ENST00000272102 ARAP1Q96P48 1450 aa17.65■□□□□ 0.42
ARF1-201ENST00000272102 LOC105371045A0A1W2PR82 267 aa17.63■□□□□ 0.41
ARF1-201ENST00000272102 CYB5RLQ6IPT4 315 aa17.63■□□□□ 0.41
ARF1-201ENST00000272102 TTBK1Q5TCY1 1321 aaPredicted RBP17.63■□□□□ 0.41
ARF1-201ENST00000272102 DISP1Q96F81 1524 aa17.61■□□□□ 0.41
ARF1-201ENST00000272102 UGGT2Q9NYU1 1516 aa17.6■□□□□ 0.41
ARF1-201ENST00000272102 P3H3Q8IVL6 736 aa17.58■□□□□ 0.41
ARF1-201ENST00000272102 KIAA0556O60303 1618 aa17.55■□□□□ 0.4
ARF1-201ENST00000272102 CARMIL2Q6F5E8 1435 aa17.54■□□□□ 0.4
ARF1-201ENST00000272102 TNIKQ9UKE5 1360 aa17.5■□□□□ 0.39
ARF1-201ENST00000272102 SAMD9Q5K651 1589 aa17.49■□□□□ 0.39
ARF1-201ENST00000272102 PTPRGP23470 1445 aa17.49■□□□□ 0.39
ARF1-201ENST00000272102 FHOD3Q2V2M9 1422 aa17.49■□□□□ 0.39
ARF1-201ENST00000272102 ARHGAP35Q9NRY4 1499 aa17.45■□□□□ 0.38
ARF1-201ENST00000272102 PLB1Q6P1J6 1458 aa17.42■□□□□ 0.38
ARF1-201ENST00000272102 ADCY10Q96PN6 1610 aa17.41■□□□□ 0.38
ARF1-201ENST00000272102 EFCAB5A4FU69 1503 aa17.41■□□□□ 0.38
ARF1-201ENST00000272102 CLIP1P30622 1438 aa17.41■□□□□ 0.38
ARF1-201ENST00000272102 CEP162Q5TB80 1403 aa17.39■□□□□ 0.38
ARF1-201ENST00000272102 ARID3CA6NKF2 412 aa17.38■□□□□ 0.37
ARF1-201ENST00000272102 TRHP20396 242 aaPredicted RBP17.37■□□□□ 0.37
ARF1-201ENST00000272102 UACAQ9BZF9 1416 aa17.37■□□□□ 0.37
ARF1-201ENST00000272102 ABCA8O94911 1581 aa17.34■□□□□ 0.37
ARF1-201ENST00000272102 ABCC2Q92887 1545 aa17.33■□□□□ 0.37
ARF1-201ENST00000272102 UHRF1BP1LA0JNW5 1464 aa17.3■□□□□ 0.36
ARF1-201ENST00000272102 RAPGEF6Q8TEU7 1601 aa17.29■□□□□ 0.36
ARF1-201ENST00000272102 ATP1B4Q9UN42 357 aaPredicted RBP17.27■□□□□ 0.36
ARF1-201ENST00000272102 NUP153P49790 1475 aaKnown RBP17.27■□□□□ 0.36
ARF1-201ENST00000272102 FMN1Q68DA7 1419 aa17.26■□□□□ 0.35
ARF1-201ENST00000272102 KDM5BQ9UGL1 1544 aa17.25■□□□□ 0.35
ARF1-201ENST00000272102 NPM1P06748 294 aaKnown RBP eCLIP17.25■□□□□ 0.35
ARF1-201ENST00000272102 ZCCHC11Q5TAX3 1644 aaKnown RBP17.25■□□□□ 0.35
ARF1-201ENST00000272102 PCF11O94913 1555 aaKnown RBP17.24■□□□□ 0.35
ARF1-201ENST00000272102 ATP10BO94823 1461 aa17.22■□□□□ 0.35
ARF1-201ENST00000272102 CDK13Q14004 1512 aaKnown RBP17.21■□□□□ 0.35
ARF1-201ENST00000272102 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.2■□□□□ 0.34
ARF1-201ENST00000272102 HNRNPUL2Q1KMD3 747 aaKnown RBP17.2■□□□□ 0.34
ARF1-201ENST00000272102 ASXL2Q76L83 1435 aa17.2■□□□□ 0.34
ARF1-201ENST00000272102 LRRIQ1Q96JM4 1722 aa17.19■□□□□ 0.34
ARF1-201ENST00000272102 MAPKBP1O60336 1514 aa17.19■□□□□ 0.34
ARF1-201ENST00000272102 CASKIN1Q8WXD9 1431 aa17.18■□□□□ 0.34
ARF1-201ENST00000272102 HECW1Q76N89 1606 aa17.17■□□□□ 0.34
ARF1-201ENST00000272102 EPRSP07814 1512 aaKnown RBP17.16■□□□□ 0.34
ARF1-201ENST00000272102 FYCO1Q9BQS8 1478 aa17.14■□□□□ 0.33
ARF1-201ENST00000272102 VPS8Q8N3P4 1428 aa17.13■□□□□ 0.33
ARF1-201ENST00000272102 KCNH8Q96L42 1107 aa17.13■□□□□ 0.33
ARF1-201ENST00000272102 WDR7Q9Y4E6 1490 aa17.12■□□□□ 0.33
ARF1-201ENST00000272102 FAM69CQ0P6D2 419 aa17.11■□□□□ 0.33
ARF1-201ENST00000272102 DIP2BQ9P265 1576 aa17.11■□□□□ 0.33
ARF1-201ENST00000272102 ABCC10Q5T3U5 1492 aa17.1■□□□□ 0.33
ARF1-201ENST00000272102 KIF13AQ9H1H9 1805 aa17.1■□□□□ 0.33
ARF1-201ENST00000272102 MAGI3Q5TCQ9 1506 aa17.07■□□□□ 0.32
ARF1-201ENST00000272102 PLEKHD1A6NEE1 506 aa17.05■□□□□ 0.32
ARF1-201ENST00000272102 CCDC18Q5T9S5 1454 aa17.05■□□□□ 0.32
ARF1-201ENST00000272102 KIF14Q15058 1648 aa17.01■□□□□ 0.31
ARF1-201ENST00000272102 TSPOAP1O95153 1857 aa17.01■□□□□ 0.31
ARF1-201ENST00000272102 PPARGC1BQ86YN6 1023 aaKnown RBP17■□□□□ 0.31
ARF1-201ENST00000272102 TROQ12816 1431 aaPredicted RBP16.99■□□□□ 0.31
ARF1-201ENST00000272102 CDK11AQ9UQ88 783 aaPredicted RBP16.99■□□□□ 0.31
ARF1-201ENST00000272102 GLI2P10070 1586 aa16.98■□□□□ 0.31
ARF1-201ENST00000272102 TIAM1Q13009 1591 aa16.98■□□□□ 0.31
ARF1-201ENST00000272102 KANK4Q5T7N3 995 aaPredicted RBP16.98■□□□□ 0.31
ARF1-201ENST00000272102 CFAP43Q8NDM7 1665 aa16.98■□□□□ 0.31
ARF1-201ENST00000272102 TTC37Q6PGP7 1564 aa16.98■□□□□ 0.31
ARF1-201ENST00000272102 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.97■□□□□ 0.311e-15■□□□□ 8.1
ARF1-201ENST00000272102 MAP3K4Q9Y6R4 1608 aa16.97■□□□□ 0.31
ARF1-201ENST00000272102 MTUS2Q5JR59 1369 aa16.96■□□□□ 0.3
ARF1-201ENST00000272102 PPRC1Q5VV67 1664 aaKnown RBP16.95■□□□□ 0.3
ARF1-201ENST00000272102 ABCA9Q8IUA7 1624 aa16.95■□□□□ 0.3
ARF1-201ENST00000272102 CD109Q6YHK3 1445 aa16.94■□□□□ 0.3
ARF1-201ENST00000272102 LRRC9Q6ZRR7 1453 aa16.91■□□□□ 0.3
ARF1-201ENST00000272102 SCAF1Q9H7N4 1312 aaKnown RBP16.9■□□□□ 0.3
ARF1-201ENST00000272102 APLP2Q06481 763 aa16.9■□□□□ 0.3
ARF1-201ENST00000272102 EHBP1L1Q8N3D4 1523 aa16.9■□□□□ 0.3
ARF1-201ENST00000272102 PCGF6Q9BYE7 350 aa16.89■□□□□ 0.29
ARF1-201ENST00000272102 MAP3K1Q13233 1512 aa16.87■□□□□ 0.29
ARF1-201ENST00000272102 NCOA2Q15596 1464 aa16.85■□□□□ 0.29
ARF1-201ENST00000272102 MYO5CQ9NQX4 1742 aa16.83■□□□□ 0.29
ARF1-201ENST00000272102 PLCH2O75038 1416 aa16.83■□□□□ 0.28
ARF1-201ENST00000272102 COL17A1Q9UMD9 1497 aaPredicted RBP16.83■□□□□ 0.28
ARF1-201ENST00000272102 CDC42BPAQ5VT25 1732 aa16.82■□□□□ 0.28
ARF1-201ENST00000272102 SUPT6HQ7KZ85 1726 aaKnown RBP16.82■□□□□ 0.28
ARF1-201ENST00000272102 GPATCH8Q9UKJ3 1502 aaKnown RBP16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms