RNA–Protein interactions for RNA: ENST00000270349.11

SLC6A3-201, Transcript of solute carrier family 6 member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A3, Length 3,936 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A3-201ENST00000270349 FHOD3Q2V2M9 1422 aa17.64■□□□□ 0.41
SLC6A3-201ENST00000270349 CHMP7Q8WUX9 453 aaPredicted RBP17.64■□□□□ 0.41
SLC6A3-201ENST00000270349 CUL7Q14999 1698 aa17.64■□□□□ 0.41
SLC6A3-201ENST00000270349 FHAD1B1AJZ9 1412 aa17.63■□□□□ 0.41
SLC6A3-201ENST00000270349 IFT140Q96RY7 1462 aa17.6■□□□□ 0.41
SLC6A3-201ENST00000270349 FAM50AQ14320 339 aaKnown RBP17.6■□□□□ 0.41
SLC6A3-201ENST00000270349 ARID3CA6NKF2 412 aa17.6■□□□□ 0.41
SLC6A3-201ENST00000270349 GRIN2BQ13224 1484 aa17.57■□□□□ 0.4
SLC6A3-201ENST00000270349 ZNF608Q9ULD9 1512 aaPredicted RBP17.55■□□□□ 0.4
SLC6A3-201ENST00000270349 ABCA5Q8WWZ7 1642 aa17.54■□□□□ 0.4
SLC6A3-201ENST00000270349 TARBP1Q13395 1621 aaKnown RBP17.52■□□□□ 0.39
SLC6A3-201ENST00000270349 FMN1Q68DA7 1419 aa17.51■□□□□ 0.39
SLC6A3-201ENST00000270349 MTUS2Q5JR59 1369 aa17.5■□□□□ 0.39
SLC6A3-201ENST00000270349 WDR97A6NE52 1622 aa17.5■□□□□ 0.39
SLC6A3-201ENST00000270349 WDR62O43379 1518 aa17.5■□□□□ 0.39
SLC6A3-201ENST00000270349 EFCAB5A4FU69 1503 aa17.47■□□□□ 0.39
SLC6A3-201ENST00000270349 SNAPC4Q5SXM2 1469 aa17.46■□□□□ 0.39
SLC6A3-201ENST00000270349 CTTNBP2Q8WZ74 1663 aa17.45■□□□□ 0.38
SLC6A3-201ENST00000270349 CCNB3Q8WWL7 1395 aa17.45■□□□□ 0.38
SLC6A3-201ENST00000270349 PBRM1Q86U86 1689 aa17.43■□□□□ 0.38
SLC6A3-201ENST00000270349 PCF11O94913 1555 aaKnown RBP17.4■□□□□ 0.38
SLC6A3-201ENST00000270349 CASKIN1Q8WXD9 1431 aa17.4■□□□□ 0.38
SLC6A3-201ENST00000270349 TIAM1Q13009 1591 aa17.39■□□□□ 0.37
SLC6A3-201ENST00000270349 ADAMTS12P58397 1594 aa17.38■□□□□ 0.37
SLC6A3-201ENST00000270349 LRRC9Q6ZRR7 1453 aa17.38■□□□□ 0.37
SLC6A3-201ENST00000270349 FYCO1Q9BQS8 1478 aa17.38■□□□□ 0.37
SLC6A3-201ENST00000270349 EIF4G3O43432 1585 aaKnown RBP17.36■□□□□ 0.37
SLC6A3-201ENST00000270349 IQGAP2Q13576 1575 aa17.36■□□□□ 0.37
SLC6A3-201ENST00000270349 THOC2Q8NI27 1593 aaKnown RBP17.34■□□□□ 0.37
SLC6A3-201ENST00000270349 CDK11AQ9UQ88 783 aaPredicted RBP17.33■□□□□ 0.37
SLC6A3-201ENST00000270349 GRIN2AQ12879 1464 aa17.33■□□□□ 0.36
SLC6A3-201ENST00000270349 JPH4Q96JJ6 628 aa17.31■□□□□ 0.36
SLC6A3-201ENST00000270349 MAGI1Q96QZ7 1491 aaPredicted RBP17.31■□□□□ 0.36
SLC6A3-201ENST00000270349 PHLDB1Q86UU1 1377 aa17.31■□□□□ 0.36
SLC6A3-201ENST00000270349 KIAA0586Q9BVV6 1533 aa17.3■□□□□ 0.36
SLC6A3-201ENST00000270349 SYNJ2O15056 1496 aa17.29■□□□□ 0.36
SLC6A3-201ENST00000270349 RRBP1Q9P2E9 1410 aaKnown RBP17.29■□□□□ 0.36
SLC6A3-201ENST00000270349 MAP3K1Q13233 1512 aa17.28■□□□□ 0.36
SLC6A3-201ENST00000270349 CARMIL2Q6F5E8 1435 aa17.28■□□□□ 0.36
SLC6A3-201ENST00000270349 SAMD9Q5K651 1589 aa17.23■□□□□ 0.35
SLC6A3-201ENST00000270349 CHIC2Q9UKJ5 165 aa17.22■□□□□ 0.35
SLC6A3-201ENST00000270349 ZNF777Q9ULD5 760 aaPredicted RBP17.2■□□□□ 0.34
SLC6A3-201ENST00000270349 CCDC18Q5T9S5 1454 aa17.2■□□□□ 0.34
SLC6A3-201ENST00000270349 CFAP43Q8NDM7 1665 aa17.19■□□□□ 0.34
SLC6A3-201ENST00000270349 HECW1Q76N89 1606 aa17.18■□□□□ 0.34
SLC6A3-201ENST00000270349 RAB3GAP2Q9H2M9 1393 aa17.17■□□□□ 0.34
SLC6A3-201ENST00000270349 NEUROD1Q13562 356 aa17.17■□□□□ 0.34
SLC6A3-201ENST00000270349 NCOA2Q15596 1464 aa17.17■□□□□ 0.34
SLC6A3-201ENST00000270349 UGGT2Q9NYU1 1516 aa17.16■□□□□ 0.34
SLC6A3-201ENST00000270349 FGD6Q6ZV73 1430 aa17.16■□□□□ 0.34
SLC6A3-201ENST00000270349 SETD5Q9C0A6 1442 aa17.16■□□□□ 0.34
SLC6A3-201ENST00000270349 PLEKHD1A6NEE1 506 aa17.15■□□□□ 0.34
SLC6A3-201ENST00000270349 CDK13Q14004 1512 aaKnown RBP17.15■□□□□ 0.34
SLC6A3-201ENST00000270349 TRIM52Q96A61 297 aa17.15■□□□□ 0.34
SLC6A3-201ENST00000270349 EPRSP07814 1512 aaKnown RBP17.15■□□□□ 0.34
SLC6A3-201ENST00000270349 RRP7BPQ9NSQ0 103 aa17.14■□□□□ 0.33
SLC6A3-201ENST00000270349 EHBP1L1Q8N3D4 1523 aa17.13■□□□□ 0.33
SLC6A3-201ENST00000270349 DHX57Q6P158 1386 aaKnown RBP17.12■□□□□ 0.33
SLC6A3-201ENST00000270349 MYOM3Q5VTT5 1437 aa17.12■□□□□ 0.33
SLC6A3-201ENST00000270349 KIAA0556O60303 1618 aa17.11■□□□□ 0.33
SLC6A3-201ENST00000270349 CEP170Q5SW79 1584 aa17.11■□□□□ 0.33
SLC6A3-201ENST00000270349 ZNF316A6NFI3 1004 aaPredicted RBP17.1■□□□□ 0.33
SLC6A3-201ENST00000270349 DISP1Q96F81 1524 aa17.1■□□□□ 0.33
SLC6A3-201ENST00000270349 DIEXFQ68CQ4 756 aaKnown RBP17.1■□□□□ 0.33
SLC6A3-201ENST00000270349 CFDP1Q9UEE9 299 aaPredicted RBP17.1■□□□□ 0.33
SLC6A3-201ENST00000270349 PRG4Q92954 1404 aaPredicted RBP17.1■□□□□ 0.33
SLC6A3-201ENST00000270349 SUPT6HQ7KZ85 1726 aaKnown RBP17.1■□□□□ 0.33
SLC6A3-201ENST00000270349 CLSPNQ9HAW4 1339 aa17.09■□□□□ 0.33
SLC6A3-201ENST00000270349 PTPRGP23470 1445 aa17.09■□□□□ 0.33
SLC6A3-201ENST00000270349 NUP160Q12769 1436 aa17.08■□□□□ 0.32
SLC6A3-201ENST00000270349 PLB1Q6P1J6 1458 aa17.07■□□□□ 0.32
SLC6A3-201ENST00000270349 RAPGEF6Q8TEU7 1601 aa17.02■□□□□ 0.32
SLC6A3-201ENST00000270349 KCNH8Q96L42 1107 aa17.01■□□□□ 0.31
SLC6A3-201ENST00000270349 NUP153P49790 1475 aaKnown RBP17.01■□□□□ 0.31
SLC6A3-201ENST00000270349 SIN3AQ96ST3 1273 aa17■□□□□ 0.31
SLC6A3-201ENST00000270349 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.99■□□□□ 0.31
SLC6A3-201ENST00000270349 ZNF644Q9H582 1327 aaPredicted RBP16.98■□□□□ 0.31
SLC6A3-201ENST00000270349 MAGI3Q5TCQ9 1506 aa16.97■□□□□ 0.31
SLC6A3-201ENST00000270349 TROQ12816 1431 aaPredicted RBP16.97■□□□□ 0.31
SLC6A3-201ENST00000270349 PTPN23Q9H3S7 1636 aa16.95■□□□□ 0.3
SLC6A3-201ENST00000270349 LRRIQ1Q96JM4 1722 aa16.95■□□□□ 0.3
SLC6A3-201ENST00000270349 CHD1O14646 1710 aa16.93■□□□□ 0.3
SLC6A3-201ENST00000270349 TSPY4P0CV99 314 aa16.93■□□□□ 0.3
SLC6A3-201ENST00000270349 TSPY10P0CW01 314 aa16.93■□□□□ 0.3
SLC6A3-201ENST00000270349 MIA2Q96PC5 1412 aa16.93■□□□□ 0.3
SLC6A3-201ENST00000270349 TONSLQ96HA7 1378 aa16.92■□□□□ 0.3
SLC6A3-201ENST00000270349 PELP1Q8IZL8 1130 aaKnown RBP16.91■□□□□ 0.3
SLC6A3-201ENST00000270349 MYT1LQ9UL68 1186 aa16.9■□□□□ 0.3
SLC6A3-201ENST00000270349 PTPRKQ15262 1439 aa16.89■□□□□ 0.29
SLC6A3-201ENST00000270349 HFM1A2PYH4 1435 aa16.88■□□□□ 0.29
SLC6A3-201ENST00000270349 UACAQ9BZF9 1416 aa16.87■□□□□ 0.29
SLC6A3-201ENST00000270349 ATP10BO94823 1461 aa16.86■□□□□ 0.29
SLC6A3-201ENST00000270349 SLC4A1APQ9BWU0 796 aaKnown RBP16.86■□□□□ 0.29
SLC6A3-201ENST00000270349 NAIPQ13075 1403 aa16.85■□□□□ 0.29
SLC6A3-201ENST00000270349 NPM1P06748 294 aaKnown RBP eCLIP16.85■□□□□ 0.29
SLC6A3-201ENST00000270349 HNRNPMP52272 730 aaKnown RBP eCLIP16.84■□□□□ 0.29
SLC6A3-201ENST00000270349 OSCARQ8IYS5 282 aa16.84■□□□□ 0.29
SLC6A3-201ENST00000270349 SCAF1Q9H7N4 1312 aaKnown RBP16.83■□□□□ 0.28
SLC6A3-201ENST00000270349 YTHDC1Q96MU7 727 aaKnown RBP16.82■□□□□ 0.28
SLC6A3-201ENST00000270349 DAPK1P53355 1430 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms