RNA–Protein interactions for RNA: ENST00000267406.10

CBLN3-201, Transcript of cerebellin 3 precursor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBLN3, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBLN3-201ENST00000267406 PDS5BQ9NTI5 1447 aa31.82■■■□□ 2.69
CBLN3-201ENST00000267406 PCF11O94913 1555 aaKnown RBP31.82■■■□□ 2.68
CBLN3-201ENST00000267406 FHAD1B1AJZ9 1412 aa31.81■■■□□ 2.68
CBLN3-201ENST00000267406 DHX57Q6P158 1386 aaKnown RBP31.81■■■□□ 2.68
CBLN3-201ENST00000267406 LRRC9Q6ZRR7 1453 aa31.78■■■□□ 2.68
CBLN3-201ENST00000267406 ABCA5Q8WWZ7 1642 aa31.77■■■□□ 2.68
CBLN3-201ENST00000267406 FHOD3Q2V2M9 1422 aa31.77■■■□□ 2.68
CBLN3-201ENST00000267406 CFAP43Q8NDM7 1665 aa31.77■■■□□ 2.68
CBLN3-201ENST00000267406 TDRD9Q8NDG6 1382 aaKnown RBP31.76■■■□□ 2.67
CBLN3-201ENST00000267406 EFCAB5A4FU69 1503 aa31.74■■■□□ 2.67
CBLN3-201ENST00000267406 ITGAEP38570 1179 aa31.72■■■□□ 2.67
CBLN3-201ENST00000267406 CLSPNQ9HAW4 1339 aa31.7■■■□□ 2.66
CBLN3-201ENST00000267406 GAPVD1Q14C86 1478 aa31.69■■■□□ 2.66
CBLN3-201ENST00000267406 ATP1B4Q9UN42 357 aaPredicted RBP31.69■■■□□ 2.66
CBLN3-201ENST00000267406 PHLDB1Q86UU1 1377 aa31.65■■■□□ 2.66
CBLN3-201ENST00000267406 FYCO1Q9BQS8 1478 aa31.64■■■□□ 2.66
CBLN3-201ENST00000267406 CASKIN1Q8WXD9 1431 aa31.6■■■□□ 2.65
CBLN3-201ENST00000267406 SCAF1Q9H7N4 1312 aaKnown RBP31.6■■■□□ 2.65
CBLN3-201ENST00000267406 TARBP1Q13395 1621 aaKnown RBP31.59■■■□□ 2.65
CBLN3-201ENST00000267406 AQRO60306 1485 aaKnown RBP eCLIP31.58■■■□□ 2.65
CBLN3-201ENST00000267406 SAMD9Q5K651 1589 aa31.51■■■□□ 2.64
CBLN3-201ENST00000267406 RAB3GAP2Q9H2M9 1393 aa31.51■■■□□ 2.64
CBLN3-201ENST00000267406 FMN1Q68DA7 1419 aa31.51■■■□□ 2.63
CBLN3-201ENST00000267406 FAM50AQ14320 339 aaKnown RBP31.49■■■□□ 2.63
CBLN3-201ENST00000267406 SNAPC4Q5SXM2 1469 aa31.48■■■□□ 2.63
CBLN3-201ENST00000267406 PELP1Q8IZL8 1130 aaKnown RBP31.47■■■□□ 2.63
CBLN3-201ENST00000267406 ACIN1Q9UKV3 1341 aaKnown RBP31.47■■■□□ 2.63
CBLN3-201ENST00000267406 PBRM1Q86U86 1689 aa31.45■■■□□ 2.63
CBLN3-201ENST00000267406 NEUROD1Q13562 356 aa31.45■■■□□ 2.63
CBLN3-201ENST00000267406 SETD5Q9C0A6 1442 aa31.42■■■□□ 2.62
CBLN3-201ENST00000267406 LRRIQ1Q96JM4 1722 aa31.42■■■□□ 2.62
CBLN3-201ENST00000267406 MRC2Q9UBG0 1479 aa31.39■■■□□ 2.61
CBLN3-201ENST00000267406 MIER1Q8N108 512 aa31.37■■■□□ 2.61
CBLN3-201ENST00000267406 MAPKBP1O60336 1514 aa31.36■■■□□ 2.61
CBLN3-201ENST00000267406 CENPBP07199 599 aaPredicted RBP31.35■■■□□ 2.61
CBLN3-201ENST00000267406 GRIN2BQ13224 1484 aa31.32■■■□□ 2.6
CBLN3-201ENST00000267406 MTUS2Q5JR59 1369 aa31.29■■■□□ 2.6
CBLN3-201ENST00000267406 ADAMTS12P58397 1594 aa31.29■■■□□ 2.6
CBLN3-201ENST00000267406 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.27■■■□□ 2.6
CBLN3-201ENST00000267406 FGD6Q6ZV73 1430 aa31.26■■■□□ 2.59
CBLN3-201ENST00000267406 THOC2Q8NI27 1593 aaKnown RBP31.25■■■□□ 2.59
CBLN3-201ENST00000267406 IQGAP2Q13576 1575 aa31.21■■■□□ 2.59
CBLN3-201ENST00000267406 YTHDC1Q96MU7 727 aaKnown RBP31.18■■■□□ 2.58
CBLN3-201ENST00000267406 NCOA2Q15596 1464 aa31.17■■■□□ 2.58
CBLN3-201ENST00000267406 ZNF608Q9ULD9 1512 aaPredicted RBP31.17■■■□□ 2.58
CBLN3-201ENST00000267406 SUPT6HQ7KZ85 1726 aaKnown RBP31.16■■■□□ 2.58
CBLN3-201ENST00000267406 WDR62O43379 1518 aa31.15■■■□□ 2.58
CBLN3-201ENST00000267406 IFT140Q96RY7 1462 aa31.15■■■□□ 2.58
CBLN3-201ENST00000267406 EHBP1L1Q8N3D4 1523 aa31.15■■■□□ 2.58
CBLN3-201ENST00000267406 MAGI3Q5TCQ9 1506 aa31.11■■■□□ 2.57
CBLN3-201ENST00000267406 MYOM3Q5VTT5 1437 aa31.1■■■□□ 2.57
CBLN3-201ENST00000267406 SIN3AQ96ST3 1273 aa31.09■■■□□ 2.57
CBLN3-201ENST00000267406 HECW1Q76N89 1606 aa31.08■■■□□ 2.57
CBLN3-201ENST00000267406 CCDC18Q5T9S5 1454 aa31.08■■■□□ 2.57
CBLN3-201ENST00000267406 PTPRKQ15262 1439 aa31.07■■■□□ 2.56
CBLN3-201ENST00000267406 GTF3C3Q9Y5Q9 886 aa31.07■■■□□ 2.56
CBLN3-201ENST00000267406 UGGT2Q9NYU1 1516 aa31.05■■■□□ 2.56
CBLN3-201ENST00000267406 ARHGEF11O15085 1522 aa31.02■■■□□ 2.56
CBLN3-201ENST00000267406 PTPN23Q9H3S7 1636 aa31.01■■■□□ 2.55
CBLN3-201ENST00000267406 EPRSP07814 1512 aaKnown RBP30.99■■■□□ 2.55
CBLN3-201ENST00000267406 EIF4G3O43432 1585 aaKnown RBP30.98■■■□□ 2.55
CBLN3-201ENST00000267406 HFM1A2PYH4 1435 aa30.98■■■□□ 2.55
CBLN3-201ENST00000267406 CDK13Q14004 1512 aaKnown RBP30.97■■■□□ 2.55
CBLN3-201ENST00000267406 ERCC6Q03468 1493 aa30.94■■■□□ 2.54
CBLN3-201ENST00000267406 KIAA0586Q9BVV6 1533 aa30.91■■■□□ 2.54
CBLN3-201ENST00000267406 ARID3CA6NKF2 412 aa30.91■■■□□ 2.54
CBLN3-201ENST00000267406 NAIPQ13075 1403 aa30.91■■■□□ 2.54
CBLN3-201ENST00000267406 KIAA0556O60303 1618 aa30.89■■■□□ 2.54
CBLN3-201ENST00000267406 GRIN2AQ12879 1464 aa30.89■■■□□ 2.54
CBLN3-201ENST00000267406 DISP1Q96F81 1524 aa30.87■■■□□ 2.53
CBLN3-201ENST00000267406 TCOF1Q13428 1488 aaKnown RBP30.86■■■□□ 2.53
CBLN3-201ENST00000267406 UACAQ9BZF9 1416 aa30.86■■■□□ 2.53
CBLN3-201ENST00000267406 TIMELESSQ9UNS1 1208 aa30.85■■■□□ 2.53
CBLN3-201ENST00000267406 PPP1R15AO75807 674 aaPredicted RBP30.77■■■□□ 2.52
CBLN3-201ENST00000267406 CHIC2Q9UKJ5 165 aa30.76■■■□□ 2.52
CBLN3-201ENST00000267406 RRP7BPQ9NSQ0 103 aa30.76■■■□□ 2.51
CBLN3-201ENST00000267406 GCC2Q8IWJ2 1684 aa30.76■■■□□ 2.51
CBLN3-201ENST00000267406 MAGI1Q96QZ7 1491 aaPredicted RBP30.76■■■□□ 2.51
CBLN3-201ENST00000267406 RAPGEF6Q8TEU7 1601 aa30.75■■■□□ 2.51
CBLN3-201ENST00000267406 MIA2Q96PC5 1412 aa30.74■■■□□ 2.51
CBLN3-201ENST00000267406 NUP153P49790 1475 aaKnown RBP30.73■■■□□ 2.51
CBLN3-201ENST00000267406 CEP170Q5SW79 1584 aa30.72■■■□□ 2.51
CBLN3-201ENST00000267406 CHMP7Q8WUX9 453 aaPredicted RBP30.7■■■□□ 2.5
CBLN3-201ENST00000267406 TONSLQ96HA7 1378 aa30.7■■■□□ 2.5
CBLN3-201ENST00000267406 SYNJ2O15056 1496 aa30.69■■■□□ 2.5
CBLN3-201ENST00000267406 KDM6BO15054 1643 aa30.67■■■□□ 2.5
CBLN3-201ENST00000267406 AKNAQ7Z591 1439 aa30.64■■■□□ 2.5
CBLN3-201ENST00000267406 FBLN2P98095 1184 aa30.64■■■□□ 2.5
CBLN3-201ENST00000267406 HIRIP3Q9BW71 556 aaPredicted RBP30.61■■■□□ 2.49
CBLN3-201ENST00000267406 DDX10Q13206 875 aaKnown RBP30.59■■■□□ 2.49
CBLN3-201ENST00000267406 TRIM52Q96A61 297 aa30.57■■■□□ 2.48
CBLN3-201ENST00000267406 DENND4BO75064 1496 aaPredicted RBP30.57■■■□□ 2.48
CBLN3-201ENST00000267406 PLB1Q6P1J6 1458 aa30.56■■■□□ 2.48
CBLN3-201ENST00000267406 CDK11AQ9UQ88 783 aaPredicted RBP30.55■■■□□ 2.48
CBLN3-201ENST00000267406 DAPK1P53355 1430 aa30.54■■■□□ 2.48
CBLN3-201ENST00000267406 NUP160Q12769 1436 aa30.53■■■□□ 2.48
CBLN3-201ENST00000267406 DNMT1P26358 1616 aaKnown RBP30.53■■■□□ 2.48
CBLN3-201ENST00000267406 ZNF644Q9H582 1327 aaPredicted RBP30.53■■■□□ 2.48
CBLN3-201ENST00000267406 PRG4Q92954 1404 aaPredicted RBP30.52■■■□□ 2.48
CBLN3-201ENST00000267406 KDM5BQ9UGL1 1544 aa30.52■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms