RNA–Protein interactions for RNA: ENST00000265993.13

TCTN3-201, Transcript of tectonic family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCTN3, Length 2,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCTN3-201ENST00000265993 TIAM1Q13009 1591 aa16.01■□□□□ 0.15
TCTN3-201ENST00000265993 DNMBPQ6XZF7 1577 aa16■□□□□ 0.15
TCTN3-201ENST00000265993 FHOD3Q2V2M9 1422 aa15.99■□□□□ 0.15
TCTN3-201ENST00000265993 PHLDB1Q86UU1 1377 aa15.97■□□□□ 0.15
TCTN3-201ENST00000265993 FAM50AQ14320 339 aaKnown RBP15.96■□□□□ 0.15
TCTN3-201ENST00000265993 PCF11O94913 1555 aaKnown RBP15.96■□□□□ 0.15
TCTN3-201ENST00000265993 ABCA10Q8WWZ4 1543 aa15.96■□□□□ 0.14
TCTN3-201ENST00000265993 LRRC9Q6ZRR7 1453 aa15.96■□□□□ 0.14
TCTN3-201ENST00000265993 TDRD9Q8NDG6 1382 aaKnown RBP15.94■□□□□ 0.14
TCTN3-201ENST00000265993 RAB3GAP2Q9H2M9 1393 aa15.94■□□□□ 0.14
TCTN3-201ENST00000265993 CLSPNQ9HAW4 1339 aa15.93■□□□□ 0.14
TCTN3-201ENST00000265993 URB2Q14146 1524 aaKnown RBP15.93■□□□□ 0.14
TCTN3-201ENST00000265993 FHAD1B1AJZ9 1412 aa15.9■□□□□ 0.14
TCTN3-201ENST00000265993 MAP3K1Q13233 1512 aa15.87■□□□□ 0.13
TCTN3-201ENST00000265993 CFAP43Q8NDM7 1665 aa15.86■□□□□ 0.13
TCTN3-201ENST00000265993 CTTNBP2Q8WZ74 1663 aa15.85■□□□□ 0.13
TCTN3-201ENST00000265993 MAPKBP1O60336 1514 aa15.84■□□□□ 0.13
TCTN3-201ENST00000265993 LAMC3Q9Y6N6 1575 aa15.84■□□□□ 0.13
TCTN3-201ENST00000265993 CUL7Q14999 1698 aa15.84■□□□□ 0.13
TCTN3-201ENST00000265993 SIN3AQ96ST3 1273 aa15.83■□□□□ 0.13
TCTN3-201ENST00000265993 SETD5Q9C0A6 1442 aa15.82■□□□□ 0.12
TCTN3-201ENST00000265993 WDR97A6NE52 1622 aa15.82■□□□□ 0.12
TCTN3-201ENST00000265993 KIF21AQ7Z4S6 1674 aa15.81■□□□□ 0.12
TCTN3-201ENST00000265993 FYCO1Q9BQS8 1478 aa15.8■□□□□ 0.12
TCTN3-201ENST00000265993 GAPVD1Q14C86 1478 aa15.8■□□□□ 0.12
TCTN3-201ENST00000265993 CASKIN1Q8WXD9 1431 aa15.8■□□□□ 0.12
TCTN3-201ENST00000265993 EFCAB5A4FU69 1503 aa15.79■□□□□ 0.12
TCTN3-201ENST00000265993 ABCA5Q8WWZ7 1642 aa15.77■□□□□ 0.12
TCTN3-201ENST00000265993 PDS5BQ9NTI5 1447 aa15.77■□□□□ 0.11
TCTN3-201ENST00000265993 SNAPC4Q5SXM2 1469 aa15.75■□□□□ 0.11
TCTN3-201ENST00000265993 LRRIQ1Q96JM4 1722 aa15.75■□□□□ 0.11
TCTN3-201ENST00000265993 MTUS2Q5JR59 1369 aa15.74■□□□□ 0.11
TCTN3-201ENST00000265993 FMN1Q68DA7 1419 aa15.74■□□□□ 0.11
TCTN3-201ENST00000265993 ARID3CA6NKF2 412 aa15.73■□□□□ 0.11
TCTN3-201ENST00000265993 HIRIP3Q9BW71 556 aaPredicted RBP15.72■□□□□ 0.11
TCTN3-201ENST00000265993 AQRO60306 1485 aaKnown RBP eCLIP15.71■□□□□ 0.11
TCTN3-201ENST00000265993 FGD6Q6ZV73 1430 aa15.71■□□□□ 0.11
TCTN3-201ENST00000265993 SAMD9Q5K651 1589 aa15.69■□□□□ 0.1
TCTN3-201ENST00000265993 KCNH8Q96L42 1107 aa15.69■□□□□ 0.1
TCTN3-201ENST00000265993 PTPRKQ15262 1439 aa15.69■□□□□ 0.1
TCTN3-201ENST00000265993 TARBP1Q13395 1621 aaKnown RBP15.68■□□□□ 0.1
TCTN3-201ENST00000265993 NCOA2Q15596 1464 aa15.65■□□□□ 0.1
TCTN3-201ENST00000265993 GRIN2BQ13224 1484 aa15.64■□□□□ 0.09
TCTN3-201ENST00000265993 DDX10Q13206 875 aaKnown RBP15.64■□□□□ 0.09
TCTN3-201ENST00000265993 PELP1Q8IZL8 1130 aaKnown RBP15.63■□□□□ 0.09
TCTN3-201ENST00000265993 MAGI3Q5TCQ9 1506 aa15.62■□□□□ 0.09
TCTN3-201ENST00000265993 CHIC2Q9UKJ5 165 aa15.62■□□□□ 0.09
TCTN3-201ENST00000265993 PBRM1Q86U86 1689 aa15.61■□□□□ 0.09
TCTN3-201ENST00000265993 CCDC18Q5T9S5 1454 aa15.61■□□□□ 0.09
TCTN3-201ENST00000265993 MYOM3Q5VTT5 1437 aa15.6■□□□□ 0.09
TCTN3-201ENST00000265993 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.6■□□□□ 0.09
TCTN3-201ENST00000265993 RRP7BPQ9NSQ0 103 aa15.59■□□□□ 0.09
TCTN3-201ENST00000265993 ZNF608Q9ULD9 1512 aaPredicted RBP15.58■□□□□ 0.08
TCTN3-201ENST00000265993 SUPT6HQ7KZ85 1726 aaKnown RBP15.58■□□□□ 0.08
TCTN3-201ENST00000265993 PPP1R15AO75807 674 aaPredicted RBP15.57■□□□□ 0.08
TCTN3-201ENST00000265993 PTPN23Q9H3S7 1636 aa15.57■□□□□ 0.08
TCTN3-201ENST00000265993 CDK13Q14004 1512 aaKnown RBP15.57■□□□□ 0.08
TCTN3-201ENST00000265993 HFM1A2PYH4 1435 aa15.56■□□□□ 0.08
TCTN3-201ENST00000265993 NAIPQ13075 1403 aa15.56■□□□□ 0.08
TCTN3-201ENST00000265993 IQGAP2Q13576 1575 aa15.55■□□□□ 0.08
TCTN3-201ENST00000265993 EHBP1L1Q8N3D4 1523 aa15.55■□□□□ 0.08
TCTN3-201ENST00000265993 ADAMTS12P58397 1594 aa15.54■□□□□ 0.08
TCTN3-201ENST00000265993 MRC2Q9UBG0 1479 aa15.53■□□□□ 0.08
TCTN3-201ENST00000265993 UGGT2Q9NYU1 1516 aa15.53■□□□□ 0.08
TCTN3-201ENST00000265993 TONSLQ96HA7 1378 aa15.53■□□□□ 0.08
TCTN3-201ENST00000265993 UACAQ9BZF9 1416 aa15.52■□□□□ 0.07
TCTN3-201ENST00000265993 THOC2Q8NI27 1593 aaKnown RBP15.51■□□□□ 0.07
TCTN3-201ENST00000265993 EPRSP07814 1512 aaKnown RBP15.51■□□□□ 0.07
TCTN3-201ENST00000265993 TRIM52Q96A61 297 aa15.49■□□□□ 0.07
TCTN3-201ENST00000265993 HECW1Q76N89 1606 aa15.48■□□□□ 0.07
TCTN3-201ENST00000265993 ARHGEF11O15085 1522 aa15.48■□□□□ 0.07
TCTN3-201ENST00000265993 TIMELESSQ9UNS1 1208 aa15.48■□□□□ 0.07
TCTN3-201ENST00000265993 KDM6BO15054 1643 aa15.47■□□□□ 0.07
TCTN3-201ENST00000265993 FOXD1Q16676 465 aa15.47■□□□□ 0.07
TCTN3-201ENST00000265993 SUPT16HQ9Y5B9 1047 aaKnown RBP15.45■□□□□ 0.06
TCTN3-201ENST00000265993 WDR62O43379 1518 aa15.45■□□□□ 0.06
TCTN3-201ENST00000265993 ZNF644Q9H582 1327 aaPredicted RBP15.44■□□□□ 0.06
TCTN3-201ENST00000265993 FBLN2P98095 1184 aa15.43■□□□□ 0.06
TCTN3-201ENST00000265993 DENND4BO75064 1496 aaPredicted RBP15.43■□□□□ 0.06
TCTN3-201ENST00000265993 IFT140Q96RY7 1462 aa15.41■□□□□ 0.06
TCTN3-201ENST00000265993 DISP1Q96F81 1524 aa15.41■□□□□ 0.06
TCTN3-201ENST00000265993 TCOF1Q13428 1488 aaKnown RBP15.4■□□□□ 0.06
TCTN3-201ENST00000265993 KDM5BQ9UGL1 1544 aa15.39■□□□□ 0.05
TCTN3-201ENST00000265993 EIF4G3O43432 1585 aaKnown RBP15.39■□□□□ 0.05
TCTN3-201ENST00000265993 KIAA0556O60303 1618 aa15.38■□□□□ 0.05
TCTN3-201ENST00000265993 GCC2Q8IWJ2 1684 aa15.38■□□□□ 0.05
TCTN3-201ENST00000265993 KIAA0586Q9BVV6 1533 aa15.37■□□□□ 0.05
TCTN3-201ENST00000265993 NUP153P49790 1475 aaKnown RBP15.37■□□□□ 0.05
TCTN3-201ENST00000265993 GRIN2AQ12879 1464 aa15.37■□□□□ 0.05
TCTN3-201ENST00000265993 MPHOSPH9Q99550 1183 aa15.37■□□□□ 0.05
TCTN3-201ENST00000265993 ERCC6Q03468 1493 aa15.37■□□□□ 0.05
TCTN3-201ENST00000265993 ANP32CO43423 234 aa15.36■□□□□ 0.05
TCTN3-201ENST00000265993 CHMP7Q8WUX9 453 aaPredicted RBP15.36■□□□□ 0.05
TCTN3-201ENST00000265993 MIA2Q96PC5 1412 aa15.34■□□□□ 0.05
TCTN3-201ENST00000265993 BCANQ96GW7 911 aa15.34■□□□□ 0.05
TCTN3-201ENST00000265993 PRG4Q92954 1404 aaPredicted RBP15.33■□□□□ 0.04
TCTN3-201ENST00000265993 PLB1Q6P1J6 1458 aa15.33■□□□□ 0.04
TCTN3-201ENST00000265993 ZNF777Q9ULD5 760 aaPredicted RBP15.32■□□□□ 0.04
TCTN3-201ENST00000265993 RAPGEF6Q8TEU7 1601 aa15.32■□□□□ 0.04
TCTN3-201ENST00000265993 L3MBTL2Q969R5 705 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms