RNA–Protein interactions for RNA: ENST00000265849.11

PMS2-201, Transcript of PMS1 homolog 2, mismatch repair system component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMS2, Length 2,855 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2-201ENST00000265849 BIVM-ERCC5R4GMW8 1640 aa16.93■□□□□ 0.3
PMS2-201ENST00000265849 SETD5Q9C0A6 1442 aa16.89■□□□□ 0.29
PMS2-201ENST00000265849 ANP32CO43423 234 aa16.88■□□□□ 0.29
PMS2-201ENST00000265849 ARHGAP35Q9NRY4 1499 aa16.87■□□□□ 0.29
PMS2-201ENST00000265849 SIN3AQ96ST3 1273 aa16.87■□□□□ 0.29
PMS2-201ENST00000265849 MYT1LQ9UL68 1186 aa16.87■□□□□ 0.29
PMS2-201ENST00000265849 CDK11AQ9UQ88 783 aaPredicted RBP16.86■□□□□ 0.29
PMS2-201ENST00000265849 TIMELESSQ9UNS1 1208 aa16.83■□□□□ 0.29
PMS2-201ENST00000265849 TIAM1Q13009 1591 aa16.82■□□□□ 0.28
PMS2-201ENST00000265849 HIRIP3Q9BW71 556 aaPredicted RBP16.81■□□□□ 0.28
PMS2-201ENST00000265849 MAP3K1Q13233 1512 aa16.8■□□□□ 0.28
PMS2-201ENST00000265849 DEKP35659 375 aaKnown RBP16.79■□□□□ 0.28
PMS2-201ENST00000265849 BICRAQ9NZM4 1560 aa16.78■□□□□ 0.28
PMS2-201ENST00000265849 ATAD2BQ9ULI0 1458 aa16.78■□□□□ 0.28
PMS2-201ENST00000265849 IRX6P78412 446 aaPredicted RBP16.76■□□□□ 0.27
PMS2-201ENST00000265849 ERICH6BQ5W0A0 696 aa16.74■□□□□ 0.27
PMS2-201ENST00000265849 PHLDB1Q86UU1 1377 aa16.73■□□□□ 0.27
PMS2-201ENST00000265849 LRRC9Q6ZRR7 1453 aa16.73■□□□□ 0.27
PMS2-201ENST00000265849 HNRNPUQ00839 825 aaKnown RBP eCLIP16.72■□□□□ 0.27
PMS2-201ENST00000265849 KIF27Q86VH2 1401 aa16.71■□□□□ 0.27
PMS2-201ENST00000265849 PPP4R2Q9NY27 417 aa16.7■□□□□ 0.26
PMS2-201ENST00000265849 CUX1P39880 1505 aa16.68■□□□□ 0.26
PMS2-201ENST00000265849 CFAP43Q8NDM7 1665 aa16.68■□□□□ 0.26
PMS2-201ENST00000265849 ANO8Q9HCE9 1232 aaPredicted RBP16.66■□□□□ 0.26
PMS2-201ENST00000265849 PABPN1Q86U42 306 aaKnown RBP eCLIP16.63■□□□□ 0.25
PMS2-201ENST00000265849 FAM50AQ14320 339 aaKnown RBP16.63■□□□□ 0.25
PMS2-201ENST00000265849 NOP58Q9Y2X3 529 aaKnown RBP16.63■□□□□ 0.25
PMS2-201ENST00000265849 TONSLQ96HA7 1378 aa16.62■□□□□ 0.25
PMS2-201ENST00000265849 EIF5BO60841 1220 aaKnown RBP16.62■□□□□ 0.25
PMS2-201ENST00000265849 FHAD1B1AJZ9 1412 aa16.61■□□□□ 0.25
PMS2-201ENST00000265849 KDM5BQ9UGL1 1544 aa16.6■□□□□ 0.25
PMS2-201ENST00000265849 PAK3O75914 559 aaPredicted RBP16.58■□□□□ 0.25
PMS2-201ENST00000265849 PCF11O94913 1555 aaKnown RBP16.58■□□□□ 0.24
PMS2-201ENST00000265849 B4GALNT3Q6L9W6 998 aa16.57■□□□□ 0.24
PMS2-201ENST00000265849 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.57■□□□□ 0.24
PMS2-201ENST00000265849 NBR1Q14596 966 aa16.56■□□□□ 0.24
PMS2-201ENST00000265849 UBE2Q2Q8WVN8 375 aa16.55■□□□□ 0.24
PMS2-201ENST00000265849 NCOA2Q15596 1464 aa16.54■□□□□ 0.24
PMS2-201ENST00000265849 CCDC18Q5T9S5 1454 aa16.53■□□□□ 0.24
PMS2-201ENST00000265849 WASHC2AQ641Q2 1341 aa16.52■□□□□ 0.24
PMS2-201ENST00000265849 UACAQ9BZF9 1416 aa16.51■□□□□ 0.23
PMS2-201ENST00000265849 DAXXQ9UER7 740 aaPredicted RBP16.51■□□□□ 0.23
PMS2-201ENST00000265849 CCDC184Q52MB2 194 aa16.51■□□□□ 0.23
PMS2-201ENST00000265849 CNTLNQ9NXG0 1405 aa16.49■□□□□ 0.23
PMS2-201ENST00000265849 PTPN23Q9H3S7 1636 aa16.49■□□□□ 0.23
PMS2-201ENST00000265849 ZBED9Q6R2W3 1325 aa16.49■□□□□ 0.23
PMS2-201ENST00000265849 IGF1RP08069 1367 aa16.48■□□□□ 0.23
PMS2-201ENST00000265849 HFM1A2PYH4 1435 aa16.47■□□□□ 0.23
PMS2-201ENST00000265849 NCAPD3P42695 1498 aa16.45■□□□□ 0.22
PMS2-201ENST00000265849 HSPA5P11021 654 aaKnown RBP16.44■□□□□ 0.22
PMS2-201ENST00000265849 FGD6Q6ZV73 1430 aa16.44■□□□□ 0.22
PMS2-201ENST00000265849 IPO9Q96P70 1041 aaKnown RBP16.44■□□□□ 0.22
PMS2-201ENST00000265849 SALL2Q9Y467 1007 aaPredicted RBP16.44■□□□□ 0.22
PMS2-201ENST00000265849 FYCO1Q9BQS8 1478 aa16.44■□□□□ 0.22
PMS2-201ENST00000265849 PTPRKQ15262 1439 aa16.44■□□□□ 0.22
PMS2-201ENST00000265849 AQRO60306 1485 aaKnown RBP eCLIP16.42■□□□□ 0.221e-7■■■■□ 21.1
PMS2-201ENST00000265849 RTL5Q5HYW3 569 aaPredicted RBP16.41■□□□□ 0.22
PMS2-201ENST00000265849 PRKRIP1Q9H875 184 aaPredicted RBP16.41■□□□□ 0.22
PMS2-201ENST00000265849 CARMIL1Q5VZK9 1371 aa16.41■□□□□ 0.22
PMS2-201ENST00000265849 ANP32AP39687 249 aaKnown RBP16.4■□□□□ 0.22
PMS2-201ENST00000265849 NAIPQ13075 1403 aa16.4■□□□□ 0.22
PMS2-201ENST00000265849 FAM9BQ8IZU0 186 aa16.4■□□□□ 0.22
PMS2-201ENST00000265849 CFTRP13569 1480 aa16.38■□□□□ 0.21
PMS2-201ENST00000265849 CASKIN1Q8WXD9 1431 aa16.38■□□□□ 0.21
PMS2-201ENST00000265849 IL27Q8NEV9 243 aa16.38■□□□□ 0.21
PMS2-201ENST00000265849 MRS2Q9HD23 443 aa16.38■□□□□ 0.21
PMS2-201ENST00000265849 HMGXB3Q12766 1538 aa16.38■□□□□ 0.21
PMS2-201ENST00000265849 FGD5Q6ZNL6 1462 aa16.38■□□□□ 0.21
PMS2-201ENST00000265849 NCOA1Q15788 1441 aa16.38■□□□□ 0.21
PMS2-201ENST00000265849 SMG6Q86US8 1419 aaKnown RBP16.37■□□□□ 0.21
PMS2-201ENST00000265849 FHOD3Q2V2M9 1422 aa16.36■□□□□ 0.21
PMS2-201ENST00000265849 AKNAQ7Z591 1439 aa16.36■□□□□ 0.21
PMS2-201ENST00000265849 RNF123Q5XPI4 1314 aa16.36■□□□□ 0.21
PMS2-201ENST00000265849 ZBTB47Q9UFB7 747 aaPredicted RBP16.36■□□□□ 0.21
PMS2-201ENST00000265849 CCDC7Q96M83 1385 aa16.35■□□□□ 0.21
PMS2-201ENST00000265849 EIF4G2P78344 907 aaKnown RBP eCLIP16.35■□□□□ 0.21
PMS2-201ENST00000265849 PRDM2Q13029 1718 aa16.34■□□□□ 0.21
PMS2-201ENST00000265849 EFCAB5A4FU69 1503 aa16.34■□□□□ 0.21
PMS2-201ENST00000265849 DENND4BO75064 1496 aaPredicted RBP16.33■□□□□ 0.21
PMS2-201ENST00000265849 P3H3Q8IVL6 736 aa16.33■□□□□ 0.21
PMS2-201ENST00000265849 HECW1Q76N89 1606 aa16.33■□□□□ 0.2
PMS2-201ENST00000265849 ABCA5Q8WWZ7 1642 aa16.33■□□□□ 0.2
PMS2-201ENST00000265849 C11orf95C9JLR9 678 aaPredicted RBP16.33■□□□□ 0.2
PMS2-201ENST00000265849 ATP1B4Q9UN42 357 aaPredicted RBP16.33■□□□□ 0.2
PMS2-201ENST00000265849 FMN1Q68DA7 1419 aa16.33■□□□□ 0.2
PMS2-201ENST00000265849 POLR1AO95602 1720 aaPredicted RBP16.32■□□□□ 0.2
PMS2-201ENST00000265849 CCDC136Q96JN2 1154 aa16.31■□□□□ 0.2
PMS2-201ENST00000265849 GCC2Q8IWJ2 1684 aa16.28■□□□□ 0.2
PMS2-201ENST00000265849 NUDCQ9Y266 331 aa16.28■□□□□ 0.2
PMS2-201ENST00000265849 SNAPC4Q5SXM2 1469 aa16.28■□□□□ 0.2
PMS2-201ENST00000265849 RTN4Q9NQC3 1192 aaKnown RBP16.26■□□□□ 0.19
PMS2-201ENST00000265849 MYOM3Q5VTT5 1437 aa16.26■□□□□ 0.19
PMS2-201ENST00000265849 LRRIQ1Q96JM4 1722 aa16.26■□□□□ 0.19
PMS2-201ENST00000265849 MTUS2Q5JR59 1369 aa16.23■□□□□ 0.19
PMS2-201ENST00000265849 WASHC2CQ9Y4E1 1318 aa16.23■□□□□ 0.19
PMS2-201ENST00000265849 CTTNBP2Q8WZ74 1663 aa16.22■□□□□ 0.19
PMS2-201ENST00000265849 USP35Q9P2H5 1018 aa16.22■□□□□ 0.19
PMS2-201ENST00000265849 KIF7Q2M1P5 1343 aa16.22■□□□□ 0.19
PMS2-201ENST00000265849 SPATA31E1Q6ZUB1 1445 aa16.21■□□□□ 0.19
PMS2-201ENST00000265849 KDM6BO15054 1643 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms