RNA–Protein interactions for RNA: ENST00000262901.4

SIM1-201, Transcript of SIM bHLH transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIM1, Length 3,999 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIM1-201ENST00000262901 ATP1B4Q9UN42 357 aaPredicted RBP14.2□□□□□ -0.14
SIM1-201ENST00000262901 RAPGEF2Q9Y4G8 1499 aa14.2□□□□□ -0.14
SIM1-201ENST00000262901 GRIN2BQ13224 1484 aa14.17□□□□□ -0.14
SIM1-201ENST00000262901 CLIP1P30622 1438 aa14.15□□□□□ -0.14
SIM1-201ENST00000262901 CEP162Q5TB80 1403 aa14.15□□□□□ -0.14
SIM1-201ENST00000262901 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.14□□□□□ -0.15
SIM1-201ENST00000262901 PRXQ9BXM0 1461 aa14.12□□□□□ -0.15
SIM1-201ENST00000262901 KIF21BO75037 1637 aa14.12□□□□□ -0.15
SIM1-201ENST00000262901 P3H3Q8IVL6 736 aa14.12□□□□□ -0.15
SIM1-201ENST00000262901 FHAD1B1AJZ9 1412 aa14.11□□□□□ -0.15
SIM1-201ENST00000262901 ERICH3Q5RHP9 1530 aa14.1□□□□□ -0.15
SIM1-201ENST00000262901 THOC2Q8NI27 1593 aaKnown RBP14.1□□□□□ -0.15
SIM1-201ENST00000262901 ZNF608Q9ULD9 1512 aaPredicted RBP14.1□□□□□ -0.15
SIM1-201ENST00000262901 HNRNPUL2Q1KMD3 747 aaKnown RBP14.07□□□□□ -0.16
SIM1-201ENST00000262901 SNAPC4Q5SXM2 1469 aa14.05□□□□□ -0.16
SIM1-201ENST00000262901 CUL7Q14999 1698 aa14.04□□□□□ -0.16
SIM1-201ENST00000262901 TARBP1Q13395 1621 aaKnown RBP14.04□□□□□ -0.16
SIM1-201ENST00000262901 GTF3C3Q9Y5Q9 886 aa14.03□□□□□ -0.16
SIM1-201ENST00000262901 ANO8Q9HCE9 1232 aaPredicted RBP14.03□□□□□ -0.16
SIM1-201ENST00000262901 ITGAEP38570 1179 aa14.01□□□□□ -0.17
SIM1-201ENST00000262901 MAGI1Q96QZ7 1491 aaPredicted RBP14.01□□□□□ -0.17
SIM1-201ENST00000262901 WDR97A6NE52 1622 aa14□□□□□ -0.17
SIM1-201ENST00000262901 ABCA5Q8WWZ7 1642 aa14□□□□□ -0.17
SIM1-201ENST00000262901 ACIN1Q9UKV3 1341 aaKnown RBP13.99□□□□□ -0.17
SIM1-201ENST00000262901 NEUROD1Q13562 356 aa13.98□□□□□ -0.17
SIM1-201ENST00000262901 EIF4G3O43432 1585 aaKnown RBP13.98□□□□□ -0.17
SIM1-201ENST00000262901 ANP32EQ9BTT0 268 aa13.97□□□□□ -0.17
SIM1-201ENST00000262901 SYNJ2O15056 1496 aa13.97□□□□□ -0.17
SIM1-201ENST00000262901 CARMIL2Q6F5E8 1435 aa13.93□□□□□ -0.18
SIM1-201ENST00000262901 JPH4Q96JJ6 628 aa13.93□□□□□ -0.18
SIM1-201ENST00000262901 GRIN2AQ12879 1464 aa13.93□□□□□ -0.18
SIM1-201ENST00000262901 ADAMTS12P58397 1594 aa13.92□□□□□ -0.18
SIM1-201ENST00000262901 VPS8Q8N3P4 1428 aa13.91□□□□□ -0.18
SIM1-201ENST00000262901 PBRM1Q86U86 1689 aa13.91□□□□□ -0.18
SIM1-201ENST00000262901 DIEXFQ68CQ4 756 aaKnown RBP13.91□□□□□ -0.18
SIM1-201ENST00000262901 OSCARQ8IYS5 282 aa13.88□□□□□ -0.19
SIM1-201ENST00000262901 KIAA0586Q9BVV6 1533 aa13.88□□□□□ -0.19
SIM1-201ENST00000262901 FHOD3Q2V2M9 1422 aa13.88□□□□□ -0.19
SIM1-201ENST00000262901 FMN1Q68DA7 1419 aa13.88□□□□□ -0.19
SIM1-201ENST00000262901 ARID3CA6NKF2 412 aa13.87□□□□□ -0.19
SIM1-201ENST00000262901 CDK11AQ9UQ88 783 aaPredicted RBP13.87□□□□□ -0.19
SIM1-201ENST00000262901 ARHGAP35Q9NRY4 1499 aa13.84□□□□□ -0.19
SIM1-201ENST00000262901 EFCAB5A4FU69 1503 aa13.84□□□□□ -0.19
SIM1-201ENST00000262901 IQGAP2Q13576 1575 aa13.83□□□□□ -0.19
SIM1-201ENST00000262901 UBE2Q2Q8WVN8 375 aa13.83□□□□□ -0.2
SIM1-201ENST00000262901 ARAP1Q96P48 1450 aa13.79□□□□□ -0.2
SIM1-201ENST00000262901 MTUS2Q5JR59 1369 aa13.79□□□□□ -0.2
SIM1-201ENST00000262901 NEFLP07196 543 aa13.79□□□□□ -0.2
SIM1-201ENST00000262901 PODXL2Q9NZ53 605 aa13.78□□□□□ -0.2
SIM1-201ENST00000262901 NPM1P06748 294 aaKnown RBP eCLIP13.77□□□□□ -0.21
SIM1-201ENST00000262901 NUP160Q12769 1436 aa13.77□□□□□ -0.21
SIM1-201ENST00000262901 PRG4Q92954 1404 aaPredicted RBP13.77□□□□□ -0.21
SIM1-201ENST00000262901 CTTNBP2Q8WZ74 1663 aa13.77□□□□□ -0.21
SIM1-201ENST00000262901 PTPRGP23470 1445 aa13.76□□□□□ -0.21
SIM1-201ENST00000262901 PLEKHD1A6NEE1 506 aa13.73□□□□□ -0.21
SIM1-201ENST00000262901 FAM50AQ14320 339 aaKnown RBP13.71□□□□□ -0.21
SIM1-201ENST00000262901 CASKIN1Q8WXD9 1431 aa13.7□□□□□ -0.22
SIM1-201ENST00000262901 UGGT2Q9NYU1 1516 aa13.7□□□□□ -0.22
SIM1-201ENST00000262901 CNGB1Q14028 1251 aaPredicted RBP13.7□□□□□ -0.22
SIM1-201ENST00000262901 CEP170Q5SW79 1584 aa13.69□□□□□ -0.22
SIM1-201ENST00000262901 CCDC136Q96JN2 1154 aa13.68□□□□□ -0.22
SIM1-201ENST00000262901 FYCO1Q9BQS8 1478 aa13.68□□□□□ -0.22
SIM1-201ENST00000262901 KANK4Q5T7N3 995 aaPredicted RBP13.68□□□□□ -0.22
SIM1-201ENST00000262901 AEBP2Q6ZN18 517 aaPredicted RBP13.67□□□□□ -0.22
SIM1-201ENST00000262901 CHD1O14646 1710 aa13.65□□□□□ -0.22
SIM1-201ENST00000262901 CCDC18Q5T9S5 1454 aa13.63□□□□□ -0.23
SIM1-201ENST00000262901 SALL2Q9Y467 1007 aaPredicted RBP13.63□□□□□ -0.23
SIM1-201ENST00000262901 POLR3GLQ9BT43 218 aa13.62□□□□□ -0.23
SIM1-201ENST00000262901 KIAA0556O60303 1618 aa13.62□□□□□ -0.23
SIM1-201ENST00000262901 PKNOX2Q96KN3 472 aa13.61□□□□□ -0.23
SIM1-201ENST00000262901 KCNH8Q96L42 1107 aa13.61□□□□□ -0.23
SIM1-201ENST00000262901 DISP1Q96F81 1524 aa13.61□□□□□ -0.23
SIM1-201ENST00000262901 SAMD9Q5K651 1589 aa13.61□□□□□ -0.23
SIM1-201ENST00000262901 PCF11O94913 1555 aaKnown RBP13.6□□□□□ -0.23
SIM1-201ENST00000262901 HECW1Q76N89 1606 aa13.6□□□□□ -0.23
SIM1-201ENST00000262901 ZNF777Q9ULD5 760 aaPredicted RBP13.6□□□□□ -0.23
SIM1-201ENST00000262901 UACAQ9BZF9 1416 aa13.58□□□□□ -0.24
SIM1-201ENST00000262901 ZNF316A6NFI3 1004 aaPredicted RBP13.57□□□□□ -0.24
SIM1-201ENST00000262901 PLB1Q6P1J6 1458 aa13.57□□□□□ -0.24
SIM1-201ENST00000262901 CCNB3Q8WWL7 1395 aa13.57□□□□□ -0.24
SIM1-201ENST00000262901 LRRC9Q6ZRR7 1453 aa13.57□□□□□ -0.24
SIM1-201ENST00000262901 CYB5RLQ6IPT4 315 aa13.56□□□□□ -0.24
SIM1-201ENST00000262901 TIAM1Q13009 1591 aa13.55□□□□□ -0.24
SIM1-201ENST00000262901 EPRSP07814 1512 aaKnown RBP13.55□□□□□ -0.24
SIM1-201ENST00000262901 CFDP1Q9UEE9 299 aaPredicted RBP13.55□□□□□ -0.24
SIM1-201ENST00000262901 MAP3K1Q13233 1512 aa13.55□□□□□ -0.24
SIM1-201ENST00000262901 BCANQ96GW7 911 aa13.54□□□□□ -0.24
SIM1-201ENST00000262901 MYT1LQ9UL68 1186 aa13.54□□□□□ -0.24
SIM1-201ENST00000262901 RAPGEF6Q8TEU7 1601 aa13.51□□□□□ -0.25
SIM1-201ENST00000262901 CDK13Q14004 1512 aaKnown RBP13.5□□□□□ -0.25
SIM1-201ENST00000262901 EHBP1L1Q8N3D4 1523 aa13.49□□□□□ -0.25
SIM1-201ENST00000262901 CLASP1Q7Z460 1538 aa13.49□□□□□ -0.25
SIM1-201ENST00000262901 KLHL34Q8N239 644 aa13.48□□□□□ -0.25
SIM1-201ENST00000262901 TROQ12816 1431 aaPredicted RBP13.48□□□□□ -0.25
SIM1-201ENST00000262901 NUP153P49790 1475 aaKnown RBP13.48□□□□□ -0.25
SIM1-201ENST00000262901 NCOA2Q15596 1464 aa13.46□□□□□ -0.25
SIM1-201ENST00000262901 TSPY4P0CV99 314 aa13.45□□□□□ -0.26
SIM1-201ENST00000262901 TSPY10P0CW01 314 aa13.45□□□□□ -0.26
SIM1-201ENST00000262901 PHLDB1Q86UU1 1377 aa13.45□□□□□ -0.26
SIM1-201ENST00000262901 MYOM3Q5VTT5 1437 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms