RNA–Protein interactions for RNA: ENST00000262316.10

RHBDF1-201, Transcript of rhomboid 5 homolog 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHBDF1, Length 2,992 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1-201ENST00000262316 AQRO60306 1485 aaKnown RBP eCLIP25.31■■□□□ 1.642e-7■■■■■ 37.9
RHBDF1-201ENST00000262316 GAPVD1Q14C86 1478 aa25.3■■□□□ 1.64
RHBDF1-201ENST00000262316 PHLDB1Q86UU1 1377 aa25.27■■□□□ 1.64
RHBDF1-201ENST00000262316 KIF21AQ7Z4S6 1674 aa25.26■■□□□ 1.63
RHBDF1-201ENST00000262316 YTHDC1Q96MU7 727 aaKnown RBP25.26■■□□□ 1.63
RHBDF1-201ENST00000262316 DHX57Q6P158 1386 aaKnown RBP25.24■■□□□ 1.63
RHBDF1-201ENST00000262316 RRBP1Q9P2E9 1410 aaKnown RBP25.2■■□□□ 1.63
RHBDF1-201ENST00000262316 FBLN2P98095 1184 aa25.2■■□□□ 1.62
RHBDF1-201ENST00000262316 NEUROD1Q13562 356 aa25.18■■□□□ 1.62
RHBDF1-201ENST00000262316 LRRC9Q6ZRR7 1453 aa25.18■■□□□ 1.62
RHBDF1-201ENST00000262316 FHAD1B1AJZ9 1412 aa25.17■■□□□ 1.62
RHBDF1-201ENST00000262316 TIAM1Q13009 1591 aa25.17■■□□□ 1.62
RHBDF1-201ENST00000262316 PCF11O94913 1555 aaKnown RBP25.16■■□□□ 1.62
RHBDF1-201ENST00000262316 RAB3GAP2Q9H2M9 1393 aa25.13■■□□□ 1.61
RHBDF1-201ENST00000262316 MIER1Q8N108 512 aa25.12■■□□□ 1.61
RHBDF1-201ENST00000262316 SIN3AQ96ST3 1273 aa25.11■■□□□ 1.61
RHBDF1-201ENST00000262316 SCAF1Q9H7N4 1312 aaKnown RBP25.09■■□□□ 1.61
RHBDF1-201ENST00000262316 MTUS2Q5JR59 1369 aa25.09■■□□□ 1.61
RHBDF1-201ENST00000262316 ZNF608Q9ULD9 1512 aaPredicted RBP25.08■■□□□ 1.61
RHBDF1-201ENST00000262316 CHIC2Q9UKJ5 165 aa25.03■■□□□ 1.6
RHBDF1-201ENST00000262316 CUL7Q14999 1698 aa25.02■■□□□ 1.6
RHBDF1-201ENST00000262316 ABCA5Q8WWZ7 1642 aa25.01■■□□□ 1.59
RHBDF1-201ENST00000262316 CASKIN1Q8WXD9 1431 aa25.01■■□□□ 1.59
RHBDF1-201ENST00000262316 ERCC6Q03468 1493 aa25■■□□□ 1.59
RHBDF1-201ENST00000262316 MRC2Q9UBG0 1479 aa24.99■■□□□ 1.59
RHBDF1-201ENST00000262316 FMN1Q68DA7 1419 aa24.98■■□□□ 1.59
RHBDF1-201ENST00000262316 WDR97A6NE52 1622 aa24.97■■□□□ 1.59
RHBDF1-201ENST00000262316 TARBP1Q13395 1621 aaKnown RBP24.96■■□□□ 1.59
RHBDF1-201ENST00000262316 SETD5Q9C0A6 1442 aa24.95■■□□□ 1.58
RHBDF1-201ENST00000262316 HIRIP3Q9BW71 556 aaPredicted RBP24.95■■□□□ 1.58
RHBDF1-201ENST00000262316 CTTNBP2Q8WZ74 1663 aa24.93■■□□□ 1.58
RHBDF1-201ENST00000262316 FYCO1Q9BQS8 1478 aa24.93■■□□□ 1.58
RHBDF1-201ENST00000262316 RRP7BPQ9NSQ0 103 aa24.92■■□□□ 1.58
RHBDF1-201ENST00000262316 CHMP7Q8WUX9 453 aaPredicted RBP24.92■■□□□ 1.58
RHBDF1-201ENST00000262316 ACIN1Q9UKV3 1341 aaKnown RBP24.9■■□□□ 1.58
RHBDF1-201ENST00000262316 EFCAB5A4FU69 1503 aa24.9■■□□□ 1.58
RHBDF1-201ENST00000262316 MAP3K1Q13233 1512 aa24.88■■□□□ 1.57
RHBDF1-201ENST00000262316 SNAPC4Q5SXM2 1469 aa24.88■■□□□ 1.57
RHBDF1-201ENST00000262316 CLSPNQ9HAW4 1339 aa24.85■■□□□ 1.57
RHBDF1-201ENST00000262316 GRIN2BQ13224 1484 aa24.84■■□□□ 1.57
RHBDF1-201ENST00000262316 FGD6Q6ZV73 1430 aa24.82■■□□□ 1.56
RHBDF1-201ENST00000262316 PTPRKQ15262 1439 aa24.81■■□□□ 1.56
RHBDF1-201ENST00000262316 CENPBP07199 599 aaPredicted RBP24.8■■□□□ 1.56
RHBDF1-201ENST00000262316 CFAP43Q8NDM7 1665 aa24.8■■□□□ 1.56
RHBDF1-201ENST00000262316 GTF3C3Q9Y5Q9 886 aa24.79■■□□□ 1.56
RHBDF1-201ENST00000262316 NCOA2Q15596 1464 aa24.78■■□□□ 1.56
RHBDF1-201ENST00000262316 TRIM52Q96A61 297 aa24.77■■□□□ 1.56
RHBDF1-201ENST00000262316 CDK13Q14004 1512 aaKnown RBP24.77■■□□□ 1.56
RHBDF1-201ENST00000262316 PBRM1Q86U86 1689 aa24.76■■□□□ 1.55
RHBDF1-201ENST00000262316 IFT140Q96RY7 1462 aa24.75■■□□□ 1.55
RHBDF1-201ENST00000262316 MAPKBP1O60336 1514 aa24.74■■□□□ 1.55
RHBDF1-201ENST00000262316 SAMD9Q5K651 1589 aa24.74■■□□□ 1.55
RHBDF1-201ENST00000262316 ZNF644Q9H582 1327 aaPredicted RBP24.73■■□□□ 1.55
RHBDF1-201ENST00000262316 MAGI3Q5TCQ9 1506 aa24.72■■□□□ 1.55
RHBDF1-201ENST00000262316 LRRIQ1Q96JM4 1722 aa24.71■■□□□ 1.55
RHBDF1-201ENST00000262316 IQGAP2Q13576 1575 aa24.71■■□□□ 1.55
RHBDF1-201ENST00000262316 ZNF777Q9ULD5 760 aaPredicted RBP24.71■■□□□ 1.55
RHBDF1-201ENST00000262316 ADAMTS12P58397 1594 aa24.71■■□□□ 1.55
RHBDF1-201ENST00000262316 FOXD1Q16676 465 aa24.69■■□□□ 1.54
RHBDF1-201ENST00000262316 MYOM3Q5VTT5 1437 aa24.68■■□□□ 1.54
RHBDF1-201ENST00000262316 DDX10Q13206 875 aaKnown RBP24.66■■□□□ 1.54
RHBDF1-201ENST00000262316 WDR62O43379 1518 aa24.64■■□□□ 1.54
RHBDF1-201ENST00000262316 JPH4Q96JJ6 628 aa24.64■■□□□ 1.53
RHBDF1-201ENST00000262316 EPRSP07814 1512 aaKnown RBP24.63■■□□□ 1.53
RHBDF1-201ENST00000262316 KCNH8Q96L42 1107 aa24.62■■□□□ 1.53
RHBDF1-201ENST00000262316 PELP1Q8IZL8 1130 aaKnown RBP24.6■■□□□ 1.53
RHBDF1-201ENST00000262316 EIF4G3O43432 1585 aaKnown RBP24.6■■□□□ 1.53
RHBDF1-201ENST00000262316 GRIN2AQ12879 1464 aa24.59■■□□□ 1.53
RHBDF1-201ENST00000262316 CCDC18Q5T9S5 1454 aa24.59■■□□□ 1.53
RHBDF1-201ENST00000262316 THOC2Q8NI27 1593 aaKnown RBP24.57■■□□□ 1.52
RHBDF1-201ENST00000262316 KIAA0586Q9BVV6 1533 aa24.56■■□□□ 1.52
RHBDF1-201ENST00000262316 DISP1Q96F81 1524 aa24.55■■□□□ 1.52
RHBDF1-201ENST00000262316 PPP1R15AO75807 674 aaPredicted RBP24.54■■□□□ 1.52
RHBDF1-201ENST00000262316 NAIPQ13075 1403 aa24.54■■□□□ 1.52
RHBDF1-201ENST00000262316 PLB1Q6P1J6 1458 aa24.53■■□□□ 1.52
RHBDF1-201ENST00000262316 TONSLQ96HA7 1378 aa24.53■■□□□ 1.52
RHBDF1-201ENST00000262316 SUPT6HQ7KZ85 1726 aaKnown RBP24.52■■□□□ 1.52
RHBDF1-201ENST00000262316 EHBP1L1Q8N3D4 1523 aa24.52■■□□□ 1.52
RHBDF1-201ENST00000262316 PRG4Q92954 1404 aaPredicted RBP24.51■■□□□ 1.51
RHBDF1-201ENST00000262316 CDK11AQ9UQ88 783 aaPredicted RBP24.49■■□□□ 1.51
RHBDF1-201ENST00000262316 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.49■■□□□ 1.51
RHBDF1-201ENST00000262316 UGGT2Q9NYU1 1516 aa24.49■■□□□ 1.51
RHBDF1-201ENST00000262316 PTPN23Q9H3S7 1636 aa24.49■■□□□ 1.51
RHBDF1-201ENST00000262316 HFM1A2PYH4 1435 aa24.48■■□□□ 1.51
RHBDF1-201ENST00000262316 HECW1Q76N89 1606 aa24.48■■□□□ 1.51
RHBDF1-201ENST00000262316 CFDP1Q9UEE9 299 aaPredicted RBP24.48■■□□□ 1.51
RHBDF1-201ENST00000262316 NUP153P49790 1475 aaKnown RBP24.45■■□□□ 1.51
RHBDF1-201ENST00000262316 CEP170Q5SW79 1584 aa24.42■■□□□ 1.5
RHBDF1-201ENST00000262316 SYNJ2O15056 1496 aa24.42■■□□□ 1.5
RHBDF1-201ENST00000262316 MPHOSPH9Q99550 1183 aa24.42■■□□□ 1.5
RHBDF1-201ENST00000262316 KIAA0556O60303 1618 aa24.42■■□□□ 1.5
RHBDF1-201ENST00000262316 UACAQ9BZF9 1416 aa24.41■■□□□ 1.5
RHBDF1-201ENST00000262316 KDM6BO15054 1643 aa24.37■■□□□ 1.49
RHBDF1-201ENST00000262316 PLEKHD1A6NEE1 506 aa24.37■■□□□ 1.49
RHBDF1-201ENST00000262316 MAGI1Q96QZ7 1491 aaPredicted RBP24.37■■□□□ 1.49
RHBDF1-201ENST00000262316 SLC4A1APQ9BWU0 796 aaKnown RBP24.35■■□□□ 1.49
RHBDF1-201ENST00000262316 ARHGEF11O15085 1522 aa24.34■■□□□ 1.49
RHBDF1-201ENST00000262316 CARMIL2Q6F5E8 1435 aa24.33■■□□□ 1.48
RHBDF1-201ENST00000262316 CNGB1Q14028 1251 aaPredicted RBP24.3■■□□□ 1.48
RHBDF1-201ENST00000262316 ZNF326Q5BKZ1 582 aaKnown RBP24.3■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms