RNA–Protein interactions for RNA: ENST00000262101.9

MSR1-201, Transcript of macrophage scavenger receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSR1, Length 2,132 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSR1-201ENST00000262101 RIMBP3BA6NNM3 1639 aa24.19■■□□□ 1.46
MSR1-201ENST00000262101 RIMBP3Q9UFD9 1639 aa24.19■■□□□ 1.46
MSR1-201ENST00000262101 JPH4Q96JJ6 628 aa24.19■■□□□ 1.46
MSR1-201ENST00000262101 EHMT2Q96KQ7 1210 aa24.14■■□□□ 1.46
MSR1-201ENST00000262101 KIAA0586Q9BVV6 1533 aa24.14■■□□□ 1.45
MSR1-201ENST00000262101 CYB5RLQ6IPT4 315 aa24.14■■□□□ 1.45
MSR1-201ENST00000262101 ERCC6L2Q5T890 1561 aa24.12■■□□□ 1.45
MSR1-201ENST00000262101 PRG4Q92954 1404 aaPredicted RBP24.08■■□□□ 1.45
MSR1-201ENST00000262101 SHROOM2Q13796 1616 aa24.07■■□□□ 1.44
MSR1-201ENST00000262101 ARAP1Q96P48 1450 aa24.07■■□□□ 1.44
MSR1-201ENST00000262101 IQGAP2Q13576 1575 aa24■■□□□ 1.43
MSR1-201ENST00000262101 TTBK1Q5TCY1 1321 aaPredicted RBP23.94■■□□□ 1.42
MSR1-201ENST00000262101 RANGAP1P46060 587 aaPredicted RBP23.93■■□□□ 1.42
MSR1-201ENST00000262101 KIF21BO75037 1637 aa23.93■■□□□ 1.42
MSR1-201ENST00000262101 UBTFP17480 764 aaKnown RBP23.92■■□□□ 1.42
MSR1-201ENST00000262101 CTTNBP2Q8WZ74 1663 aa23.9■■□□□ 1.42
MSR1-201ENST00000262101 DISP1Q96F81 1524 aa23.88■■□□□ 1.41
MSR1-201ENST00000262101 UGGT2Q9NYU1 1516 aa23.87■■□□□ 1.41
MSR1-201ENST00000262101 CARMIL2Q6F5E8 1435 aa23.86■■□□□ 1.41
MSR1-201ENST00000262101 GOLGA3Q08378 1498 aa23.85■■□□□ 1.41
MSR1-201ENST00000262101 P3H3Q8IVL6 736 aa23.84■■□□□ 1.41
MSR1-201ENST00000262101 PTPRGP23470 1445 aa23.81■■□□□ 1.4
MSR1-201ENST00000262101 TNIKQ9UKE5 1360 aa23.81■■□□□ 1.4
MSR1-201ENST00000262101 KIAA0556O60303 1618 aa23.77■■□□□ 1.4
MSR1-201ENST00000262101 LOC105371045A0A1W2PR82 267 aa23.75■■□□□ 1.39
MSR1-201ENST00000262101 SAMD9Q5K651 1589 aa23.65■■□□□ 1.38
MSR1-201ENST00000262101 ADCY10Q96PN6 1610 aa23.64■■□□□ 1.38
MSR1-201ENST00000262101 FHOD3Q2V2M9 1422 aa23.64■■□□□ 1.37
MSR1-201ENST00000262101 UACAQ9BZF9 1416 aa23.63■■□□□ 1.37
MSR1-201ENST00000262101 PLB1Q6P1J6 1458 aa23.63■■□□□ 1.37
MSR1-201ENST00000262101 NPM1P06748 294 aaKnown RBP eCLIP23.6■■□□□ 1.37
MSR1-201ENST00000262101 TRHP20396 242 aaPredicted RBP23.58■■□□□ 1.37
MSR1-201ENST00000262101 ARHGAP35Q9NRY4 1499 aa23.58■■□□□ 1.36
MSR1-201ENST00000262101 ARID3CA6NKF2 412 aa23.56■■□□□ 1.36
MSR1-201ENST00000262101 EFCAB5A4FU69 1503 aa23.54■■□□□ 1.36
MSR1-201ENST00000262101 UHRF1BP1LA0JNW5 1464 aa23.54■■□□□ 1.36
MSR1-201ENST00000262101 ABCC2Q92887 1545 aa23.53■■□□□ 1.36
MSR1-201ENST00000262101 ABCA8O94911 1581 aa23.51■■□□□ 1.35
MSR1-201ENST00000262101 CLIP1P30622 1438 aa23.48■■□□□ 1.35
MSR1-201ENST00000262101 KDM5BQ9UGL1 1544 aa23.46■■□□□ 1.35
MSR1-201ENST00000262101 ATP1B4Q9UN42 357 aaPredicted RBP23.42■■□□□ 1.34
MSR1-201ENST00000262101 CEP162Q5TB80 1403 aa23.42■■□□□ 1.34
MSR1-201ENST00000262101 MAPKBP1O60336 1514 aa23.41■■□□□ 1.34
MSR1-201ENST00000262101 RAPGEF6Q8TEU7 1601 aa23.4■■□□□ 1.34
MSR1-201ENST00000262101 ASXL2Q76L83 1435 aa23.4■■□□□ 1.34
MSR1-201ENST00000262101 ZCCHC11Q5TAX3 1644 aaKnown RBP23.4■■□□□ 1.34
MSR1-201ENST00000262101 ATP10BO94823 1461 aa23.4■■□□□ 1.34
MSR1-201ENST00000262101 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.39■■□□□ 1.33
MSR1-201ENST00000262101 FAM69CQ0P6D2 419 aa23.39■■□□□ 1.33
MSR1-201ENST00000262101 HNRNPUL2Q1KMD3 747 aaKnown RBP23.39■■□□□ 1.33
MSR1-201ENST00000262101 NUP153P49790 1475 aaKnown RBP23.39■■□□□ 1.33
MSR1-201ENST00000262101 FMN1Q68DA7 1419 aa23.38■■□□□ 1.33
MSR1-201ENST00000262101 ABCC10Q5T3U5 1492 aa23.34■■□□□ 1.33
MSR1-201ENST00000262101 KCNH8Q96L42 1107 aa23.33■■□□□ 1.33
MSR1-201ENST00000262101 DIP2BQ9P265 1576 aa23.27■■□□□ 1.32
MSR1-201ENST00000262101 KIF13AQ9H1H9 1805 aa23.27■■□□□ 1.32
MSR1-201ENST00000262101 WDR7Q9Y4E6 1490 aa23.27■■□□□ 1.32
MSR1-201ENST00000262101 CDK13Q14004 1512 aaKnown RBP23.26■■□□□ 1.31
MSR1-201ENST00000262101 EPRSP07814 1512 aaKnown RBP23.24■■□□□ 1.31
MSR1-201ENST00000262101 CASKIN1Q8WXD9 1431 aa23.23■■□□□ 1.31
MSR1-201ENST00000262101 PCF11O94913 1555 aaKnown RBP23.23■■□□□ 1.31
MSR1-201ENST00000262101 PLEKHD1A6NEE1 506 aa23.23■■□□□ 1.31
MSR1-201ENST00000262101 HECW1Q76N89 1606 aa23.2■■□□□ 1.31
MSR1-201ENST00000262101 LRRIQ1Q96JM4 1722 aa23.17■■□□□ 1.3
MSR1-201ENST00000262101 FYCO1Q9BQS8 1478 aa23.15■■□□□ 1.3
MSR1-201ENST00000262101 GLI2P10070 1586 aa23.14■■□□□ 1.29
MSR1-201ENST00000262101 TSPOAP1O95153 1857 aa23.13■■□□□ 1.29
MSR1-201ENST00000262101 CDK11AQ9UQ88 783 aaPredicted RBP23.12■■□□□ 1.29
MSR1-201ENST00000262101 VPS8Q8N3P4 1428 aa23.1■■□□□ 1.29
MSR1-201ENST00000262101 CD109Q6YHK3 1445 aa23.08■■□□□ 1.29
MSR1-201ENST00000262101 CCDC18Q5T9S5 1454 aa23.07■■□□□ 1.28
MSR1-201ENST00000262101 MAP3K4Q9Y6R4 1608 aa23.06■■□□□ 1.28
MSR1-201ENST00000262101 MAGI3Q5TCQ9 1506 aa23.05■■□□□ 1.28
MSR1-201ENST00000262101 TROQ12816 1431 aaPredicted RBP23.03■■□□□ 1.28
MSR1-201ENST00000262101 PPRC1Q5VV67 1664 aaKnown RBP23.02■■□□□ 1.28
MSR1-201ENST00000262101 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.01■■□□□ 1.27
MSR1-201ENST00000262101 ABCA9Q8IUA7 1624 aa23■■□□□ 1.27
MSR1-201ENST00000262101 CFAP43Q8NDM7 1665 aa22.98■■□□□ 1.27
MSR1-201ENST00000262101 KIF14Q15058 1648 aa22.98■■□□□ 1.27
MSR1-201ENST00000262101 TTC37Q6PGP7 1564 aa22.96■■□□□ 1.27
MSR1-201ENST00000262101 MTUS2Q5JR59 1369 aa22.95■■□□□ 1.26
MSR1-201ENST00000262101 KANK4Q5T7N3 995 aaPredicted RBP22.94■■□□□ 1.26
MSR1-201ENST00000262101 COL17A1Q9UMD9 1497 aaPredicted RBP22.93■■□□□ 1.26
MSR1-201ENST00000262101 TEX14Q8IWB6 1497 aa22.92■■□□□ 1.26
MSR1-201ENST00000262101 TIAM1Q13009 1591 aa22.89■■□□□ 1.25
MSR1-201ENST00000262101 PLCH2O75038 1416 aa22.88■■□□□ 1.25
MSR1-201ENST00000262101 APLP2Q06481 763 aa22.87■■□□□ 1.25
MSR1-201ENST00000262101 KDM6BO15054 1643 aa22.86■■□□□ 1.25
MSR1-201ENST00000262101 FANCAO15360 1455 aa22.85■■□□□ 1.25
MSR1-201ENST00000262101 LRRC9Q6ZRR7 1453 aa22.84■■□□□ 1.25
MSR1-201ENST00000262101 RAPGEF3O95398 923 aa22.83■■□□□ 1.25
MSR1-201ENST00000262101 EFCAB2Q5VUJ9 269 aa22.82■■□□□ 1.24
MSR1-201ENST00000262101 AKNAQ7Z591 1439 aa22.81■■□□□ 1.24
MSR1-201ENST00000262101 EHBP1L1Q8N3D4 1523 aa22.81■■□□□ 1.24
MSR1-201ENST00000262101 MAP3K1Q13233 1512 aa22.8■■□□□ 1.24
MSR1-201ENST00000262101 NEO1Q92859 1461 aa22.8■■□□□ 1.24
MSR1-201ENST00000262101 GPATCH8Q9UKJ3 1502 aaKnown RBP22.79■■□□□ 1.24
MSR1-201ENST00000262101 CCNB3Q8WWL7 1395 aa22.78■■□□□ 1.24
MSR1-201ENST00000262101 ZNF777Q9ULD5 760 aaPredicted RBP22.78■■□□□ 1.24
MSR1-201ENST00000262101 MYO5CQ9NQX4 1742 aa22.78■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 7 ms