RNA–Protein interactions for RNA: ENST00000261944.9

CDHR2-201, Transcript of cadherin related family member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDHR2, Length 4,068 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR2-201ENST00000261944 RAPGEF2Q9Y4G8 1499 aa15.39■□□□□ 0.05
CDHR2-201ENST00000261944 TOP2BQ02880 1626 aa15.37■□□□□ 0.05
CDHR2-201ENST00000261944 MYT1Q01538 1121 aa15.36■□□□□ 0.05
CDHR2-201ENST00000261944 PLEKHD1A6NEE1 506 aa15.35■□□□□ 0.05
CDHR2-201ENST00000261944 FHAD1B1AJZ9 1412 aa15.34■□□□□ 0.05
CDHR2-201ENST00000261944 CARMIL2Q6F5E8 1435 aa15.33■□□□□ 0.04
CDHR2-201ENST00000261944 CEP162Q5TB80 1403 aa15.33■□□□□ 0.04
CDHR2-201ENST00000261944 ABCA10Q8WWZ4 1543 aa15.3■□□□□ 0.04
CDHR2-201ENST00000261944 PLPPR3Q6T4P5 718 aa15.3■□□□□ 0.04
CDHR2-201ENST00000261944 TNIKQ9UKE5 1360 aa15.3■□□□□ 0.04
CDHR2-201ENST00000261944 MTUS2Q5JR59 1369 aa15.27■□□□□ 0.04
CDHR2-201ENST00000261944 FHOD3Q2V2M9 1422 aa15.26■□□□□ 0.03
CDHR2-201ENST00000261944 PTPRGP23470 1445 aa15.26■□□□□ 0.03
CDHR2-201ENST00000261944 WDR62O43379 1518 aa15.25■□□□□ 0.03
CDHR2-201ENST00000261944 PRG4Q92954 1404 aaPredicted RBP15.22■□□□□ 0.03
CDHR2-201ENST00000261944 TRIM26Q12899 539 aaPredicted RBP15.22■□□□□ 0.03
CDHR2-201ENST00000261944 ZEB1P37275 1124 aaPredicted RBP15.2■□□□□ 0.02
CDHR2-201ENST00000261944 HRCP23327 699 aa15.2■□□□□ 0.02
CDHR2-201ENST00000261944 SYNJ2O15056 1496 aa15.19■□□□□ 0.02
CDHR2-201ENST00000261944 CHIC2Q9UKJ5 165 aa15.19■□□□□ 0.02
CDHR2-201ENST00000261944 MAGI1Q96QZ7 1491 aaPredicted RBP15.15■□□□□ 0.02
CDHR2-201ENST00000261944 GRIN2AQ12879 1464 aa15.14■□□□□ 0.01
CDHR2-201ENST00000261944 TRIM52Q96A61 297 aa15.13■□□□□ 0.01
CDHR2-201ENST00000261944 CFDP1Q9UEE9 299 aaPredicted RBP15.13■□□□□ 0.01
CDHR2-201ENST00000261944 FAM69CQ0P6D2 419 aa15.12■□□□□ 0.01
CDHR2-201ENST00000261944 THOC2Q8NI27 1593 aaKnown RBP15.11■□□□□ 0.01
CDHR2-201ENST00000261944 PRXQ9BXM0 1461 aa15.11■□□□□ 0.01
CDHR2-201ENST00000261944 BIVM-ERCC5R4GMW8 1640 aa15.1■□□□□ 0.01
CDHR2-201ENST00000261944 EIF4G3O43432 1585 aaKnown RBP15.1■□□□□ 0.01
CDHR2-201ENST00000261944 KANK4Q5T7N3 995 aaPredicted RBP15.08■□□□□ 0.01
CDHR2-201ENST00000261944 YTHDC1Q96MU7 727 aaKnown RBP15.08■□□□□ 0
CDHR2-201ENST00000261944 ARID4BQ4LE39 1312 aaPredicted RBP15.07■□□□□ 0
CDHR2-201ENST00000261944 TSPY4P0CV99 314 aa15.07■□□□□ 0
CDHR2-201ENST00000261944 TSPY10P0CW01 314 aa15.07■□□□□ 0
CDHR2-201ENST00000261944 ERICH3Q5RHP9 1530 aa15.07■□□□□ 0
CDHR2-201ENST00000261944 ESF1Q9H501 851 aaKnown RBP15.06■□□□□ 0
CDHR2-201ENST00000261944 FMN1Q68DA7 1419 aa15.05■□□□□ 0
CDHR2-201ENST00000261944 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.05■□□□□ 05e-7■■□□□ 12.5
CDHR2-201ENST00000261944 KIAA0586Q9BVV6 1533 aa15.05■□□□□ 0
CDHR2-201ENST00000261944 MLECQ14165 292 aa15.02□□□□□ -0.01
CDHR2-201ENST00000261944 CENPBP07199 599 aaPredicted RBP15.01□□□□□ -0.01
CDHR2-201ENST00000261944 RRP7BPQ9NSQ0 103 aa15□□□□□ -0.01
CDHR2-201ENST00000261944 PRDM2Q13029 1718 aa14.99□□□□□ -0.01
CDHR2-201ENST00000261944 CCNB3Q8WWL7 1395 aa14.99□□□□□ -0.01
CDHR2-201ENST00000261944 TARBP1Q13395 1621 aaKnown RBP14.99□□□□□ -0.01
CDHR2-201ENST00000261944 VPS8Q8N3P4 1428 aa14.97□□□□□ -0.01
CDHR2-201ENST00000261944 DNAJC5Q9H3Z4 198 aa14.97□□□□□ -0.01
CDHR2-201ENST00000261944 EFCAB2Q5VUJ9 269 aa14.95□□□□□ -0.02
CDHR2-201ENST00000261944 HNRNPMP52272 730 aaKnown RBP eCLIP14.93□□□□□ -0.023e-7■■■■■ 27.8
CDHR2-201ENST00000261944 IQGAP2Q13576 1575 aa14.92□□□□□ -0.02
CDHR2-201ENST00000261944 SENP3Q9H4L4 574 aaPredicted RBP14.92□□□□□ -0.02
CDHR2-201ENST00000261944 PLB1Q6P1J6 1458 aa14.92□□□□□ -0.02
CDHR2-201ENST00000261944 ARHGAP35Q9NRY4 1499 aa14.91□□□□□ -0.02
CDHR2-201ENST00000261944 CUL7Q14999 1698 aa14.9□□□□□ -0.02
CDHR2-201ENST00000261944 ARAP1Q96P48 1450 aa14.9□□□□□ -0.02
CDHR2-201ENST00000261944 ADAMTS12P58397 1594 aa14.9□□□□□ -0.02
CDHR2-201ENST00000261944 CHGAP10645 457 aaKnown RBP14.89□□□□□ -0.03
CDHR2-201ENST00000261944 KIF21BO75037 1637 aa14.88□□□□□ -0.03
CDHR2-201ENST00000261944 UACAQ9BZF9 1416 aa14.88□□□□□ -0.03
CDHR2-201ENST00000261944 NEUROD1Q13562 356 aa14.88□□□□□ -0.03
CDHR2-201ENST00000261944 ABCA5Q8WWZ7 1642 aa14.87□□□□□ -0.03
CDHR2-201ENST00000261944 BCANQ96GW7 911 aa14.86□□□□□ -0.03
CDHR2-201ENST00000261944 GGT6Q6P531 493 aa14.85□□□□□ -0.03
CDHR2-201ENST00000261944 NUP160Q12769 1436 aa14.85□□□□□ -0.03
CDHR2-201ENST00000261944 ZNF644Q9H582 1327 aaPredicted RBP14.84□□□□□ -0.03
CDHR2-201ENST00000261944 ZNF326Q5BKZ1 582 aaKnown RBP14.82□□□□□ -0.04
CDHR2-201ENST00000261944 STAG3Q9UJ98 1225 aa14.82□□□□□ -0.04
CDHR2-201ENST00000261944 PBRM1Q86U86 1689 aa14.82□□□□□ -0.04
CDHR2-201ENST00000261944 RAPGEF3O95398 923 aa14.79□□□□□ -0.04
CDHR2-201ENST00000261944 AFAP1Q8N556 730 aa14.79□□□□□ -0.04
CDHR2-201ENST00000261944 CCDC18Q5T9S5 1454 aa14.78□□□□□ -0.04
CDHR2-201ENST00000261944 CEP170Q5SW79 1584 aa14.78□□□□□ -0.04
CDHR2-201ENST00000261944 SPAG9O60271 1321 aaKnown RBP14.76□□□□□ -0.05
CDHR2-201ENST00000261944 CDK13Q14004 1512 aaKnown RBP14.76□□□□□ -0.05
CDHR2-201ENST00000261944 CASKIN1Q8WXD9 1431 aa14.74□□□□□ -0.05
CDHR2-201ENST00000261944 CHD1O14646 1710 aa14.73□□□□□ -0.05
CDHR2-201ENST00000261944 KIF3BO15066 747 aa14.73□□□□□ -0.05
CDHR2-201ENST00000261944 ARHGEF11O15085 1522 aa14.72□□□□□ -0.05
CDHR2-201ENST00000261944 POLR3GLQ9BT43 218 aa14.72□□□□□ -0.05
CDHR2-201ENST00000261944 SLC4A1APQ9BWU0 796 aaKnown RBP14.72□□□□□ -0.05
CDHR2-201ENST00000261944 EFCAB5A4FU69 1503 aa14.71□□□□□ -0.05
CDHR2-201ENST00000261944 ERCC6L2Q5T890 1561 aa14.68□□□□□ -0.06
CDHR2-201ENST00000261944 DISP1Q96F81 1524 aa14.68□□□□□ -0.06
CDHR2-201ENST00000261944 CD109Q6YHK3 1445 aa14.67□□□□□ -0.06
CDHR2-201ENST00000261944 ASXL2Q76L83 1435 aa14.67□□□□□ -0.06
CDHR2-201ENST00000261944 CNGB1Q14028 1251 aaPredicted RBP14.67□□□□□ -0.06
CDHR2-201ENST00000261944 EPRSP07814 1512 aaKnown RBP14.67□□□□□ -0.06
CDHR2-201ENST00000261944 WDR97A6NE52 1622 aa14.66□□□□□ -0.06
CDHR2-201ENST00000261944 TROQ12816 1431 aaPredicted RBP14.65□□□□□ -0.06
CDHR2-201ENST00000261944 RGL3Q3MIN7 710 aa14.65□□□□□ -0.06
CDHR2-201ENST00000261944 ATP10BO94823 1461 aa14.65□□□□□ -0.06
CDHR2-201ENST00000261944 UGGT2Q9NYU1 1516 aa14.64□□□□□ -0.07
CDHR2-201ENST00000261944 FYCO1Q9BQS8 1478 aa14.63□□□□□ -0.07
CDHR2-201ENST00000261944 PHLDB1Q86UU1 1377 aa14.63□□□□□ -0.07
CDHR2-201ENST00000261944 DIEXFQ68CQ4 756 aaKnown RBP14.63□□□□□ -0.07
CDHR2-201ENST00000261944 KDM2AQ9Y2K7 1162 aa14.62□□□□□ -0.07
CDHR2-201ENST00000261944 ARHGAP5Q13017 1502 aa14.62□□□□□ -0.07
CDHR2-201ENST00000261944 KIAA0556O60303 1618 aa14.61□□□□□ -0.07
CDHR2-201ENST00000261944 FOXD1Q16676 465 aa14.61□□□□□ -0.07
CDHR2-201ENST00000261944 LRRC9Q6ZRR7 1453 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms