RNA–Protein interactions for RNA: ENST00000261489.6

TSC22D1-201, Transcript of TSC22 domain family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSC22D1, Length 3,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC22D1-201ENST00000261489 APLP2Q06481 763 aa13.88□□□□□ -0.19
TSC22D1-201ENST00000261489 ERICH3Q5RHP9 1530 aa13.87□□□□□ -0.19
TSC22D1-201ENST00000261489 WDR97A6NE52 1622 aa13.87□□□□□ -0.19
TSC22D1-201ENST00000261489 FHAD1B1AJZ9 1412 aa13.87□□□□□ -0.19
TSC22D1-201ENST00000261489 ARAP1Q96P48 1450 aa13.83□□□□□ -0.2
TSC22D1-201ENST00000261489 FHOD3Q2V2M9 1422 aa13.83□□□□□ -0.2
TSC22D1-201ENST00000261489 ARHGAP35Q9NRY4 1499 aa13.81□□□□□ -0.2
TSC22D1-201ENST00000261489 PBRM1Q86U86 1689 aa13.79□□□□□ -0.2
TSC22D1-201ENST00000261489 KANK4Q5T7N3 995 aaPredicted RBP13.79□□□□□ -0.2
TSC22D1-201ENST00000261489 JPH4Q96JJ6 628 aa13.79□□□□□ -0.2
TSC22D1-201ENST00000261489 CUL7Q14999 1698 aa13.78□□□□□ -0.2
TSC22D1-201ENST00000261489 GRIN2AQ12879 1464 aa13.77□□□□□ -0.2
TSC22D1-201ENST00000261489 ADAMTS12P58397 1594 aa13.76□□□□□ -0.21
TSC22D1-201ENST00000261489 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.76□□□□□ -0.21
TSC22D1-201ENST00000261489 HNRNPUL2Q1KMD3 747 aaKnown RBP13.76□□□□□ -0.21
TSC22D1-201ENST00000261489 VPS8Q8N3P4 1428 aa13.76□□□□□ -0.21
TSC22D1-201ENST00000261489 SYNJ2O15056 1496 aa13.75□□□□□ -0.21
TSC22D1-201ENST00000261489 TRIM26Q12899 539 aaPredicted RBP13.75□□□□□ -0.21
TSC22D1-201ENST00000261489 MAGI1Q96QZ7 1491 aaPredicted RBP13.74□□□□□ -0.21
TSC22D1-201ENST00000261489 ITGAEP38570 1179 aa13.68□□□□□ -0.22
TSC22D1-201ENST00000261489 KIAA0586Q9BVV6 1533 aa13.67□□□□□ -0.22
TSC22D1-201ENST00000261489 CEP170Q5SW79 1584 aa13.66□□□□□ -0.22
TSC22D1-201ENST00000261489 IQGAP2Q13576 1575 aa13.65□□□□□ -0.22
TSC22D1-201ENST00000261489 OSCARQ8IYS5 282 aa13.63□□□□□ -0.23
TSC22D1-201ENST00000261489 PRG4Q92954 1404 aaPredicted RBP13.62□□□□□ -0.23
TSC22D1-201ENST00000261489 CTTNBP2Q8WZ74 1663 aa13.62□□□□□ -0.23
TSC22D1-201ENST00000261489 NUP160Q12769 1436 aa13.61□□□□□ -0.23
TSC22D1-201ENST00000261489 DISP1Q96F81 1524 aa13.58□□□□□ -0.23
TSC22D1-201ENST00000261489 FMN1Q68DA7 1419 aa13.58□□□□□ -0.24
TSC22D1-201ENST00000261489 CHD1O14646 1710 aa13.58□□□□□ -0.24
TSC22D1-201ENST00000261489 CARMIL2Q6F5E8 1435 aa13.56□□□□□ -0.24
TSC22D1-201ENST00000261489 PLB1Q6P1J6 1458 aa13.56□□□□□ -0.24
TSC22D1-201ENST00000261489 FAM50AQ14320 339 aaKnown RBP13.56□□□□□ -0.24
TSC22D1-201ENST00000261489 PCF11O94913 1555 aaKnown RBP13.55□□□□□ -0.24
TSC22D1-201ENST00000261489 MTUS2Q5JR59 1369 aa13.54□□□□□ -0.24
TSC22D1-201ENST00000261489 PTPRGP23470 1445 aa13.54□□□□□ -0.24
TSC22D1-201ENST00000261489 EFCAB5A4FU69 1503 aa13.54□□□□□ -0.24
TSC22D1-201ENST00000261489 ERCC6L2Q5T890 1561 aa13.53□□□□□ -0.24
TSC22D1-201ENST00000261489 CASKIN1Q8WXD9 1431 aa13.52□□□□□ -0.24
TSC22D1-201ENST00000261489 UGGT2Q9NYU1 1516 aa13.52□□□□□ -0.25
TSC22D1-201ENST00000261489 KCNH8Q96L42 1107 aa13.51□□□□□ -0.25
TSC22D1-201ENST00000261489 SAMD9Q5K651 1589 aa13.51□□□□□ -0.25
TSC22D1-201ENST00000261489 CDK13Q14004 1512 aaKnown RBP13.5□□□□□ -0.25
TSC22D1-201ENST00000261489 KIAA0556O60303 1618 aa13.49□□□□□ -0.25
TSC22D1-201ENST00000261489 CYB5RLQ6IPT4 315 aa13.48□□□□□ -0.25
TSC22D1-201ENST00000261489 PHLDB1Q86UU1 1377 aa13.47□□□□□ -0.25
TSC22D1-201ENST00000261489 ZNF777Q9ULD5 760 aaPredicted RBP13.46□□□□□ -0.25
TSC22D1-201ENST00000261489 LRRC9Q6ZRR7 1453 aa13.46□□□□□ -0.25
TSC22D1-201ENST00000261489 FYCO1Q9BQS8 1478 aa13.46□□□□□ -0.26
TSC22D1-201ENST00000261489 PLEKHD1A6NEE1 506 aa13.44□□□□□ -0.26
TSC22D1-201ENST00000261489 TIAM1Q13009 1591 aa13.44□□□□□ -0.26
TSC22D1-201ENST00000261489 CDK11AQ9UQ88 783 aaPredicted RBP13.44□□□□□ -0.26
TSC22D1-201ENST00000261489 EPRSP07814 1512 aaKnown RBP13.43□□□□□ -0.26
TSC22D1-201ENST00000261489 NUP153P49790 1475 aaKnown RBP13.43□□□□□ -0.26
TSC22D1-201ENST00000261489 CHIC2Q9UKJ5 165 aa13.42□□□□□ -0.26
TSC22D1-201ENST00000261489 ZNF644Q9H582 1327 aaPredicted RBP13.4□□□□□ -0.26
TSC22D1-201ENST00000261489 CCER1Q8TC90 406 aaPredicted RBP13.39□□□□□ -0.27
TSC22D1-201ENST00000261489 MAGI3Q5TCQ9 1506 aa13.39□□□□□ -0.27
TSC22D1-201ENST00000261489 CCNB3Q8WWL7 1395 aa13.39□□□□□ -0.27
TSC22D1-201ENST00000261489 UACAQ9BZF9 1416 aa13.37□□□□□ -0.27
TSC22D1-201ENST00000261489 CLASP1Q7Z460 1538 aa13.36□□□□□ -0.27
TSC22D1-201ENST00000261489 ATP10BO94823 1461 aa13.36□□□□□ -0.27
TSC22D1-201ENST00000261489 LRRIQ1Q96JM4 1722 aa13.35□□□□□ -0.27
TSC22D1-201ENST00000261489 NCOA2Q15596 1464 aa13.35□□□□□ -0.27
TSC22D1-201ENST00000261489 RAPGEF6Q8TEU7 1601 aa13.35□□□□□ -0.27
TSC22D1-201ENST00000261489 CFDP1Q9UEE9 299 aaPredicted RBP13.34□□□□□ -0.27
TSC22D1-201ENST00000261489 HECW1Q76N89 1606 aa13.33□□□□□ -0.28
TSC22D1-201ENST00000261489 NPM1P06748 294 aaKnown RBP eCLIP13.33□□□□□ -0.28
TSC22D1-201ENST00000261489 RRP7BPQ9NSQ0 103 aa13.32□□□□□ -0.28
TSC22D1-201ENST00000261489 CCDC18Q5T9S5 1454 aa13.31□□□□□ -0.28
TSC22D1-201ENST00000261489 MAP3K1Q13233 1512 aa13.29□□□□□ -0.28
TSC22D1-201ENST00000261489 SHROOM2Q13796 1616 aa13.29□□□□□ -0.28
TSC22D1-201ENST00000261489 ABCA8O94911 1581 aa13.28□□□□□ -0.28
TSC22D1-201ENST00000261489 FGD6Q6ZV73 1430 aa13.28□□□□□ -0.28
TSC22D1-201ENST00000261489 HRCP23327 699 aa13.28□□□□□ -0.28
TSC22D1-201ENST00000261489 TROQ12816 1431 aaPredicted RBP13.27□□□□□ -0.28
TSC22D1-201ENST00000261489 RRBP1Q9P2E9 1410 aaKnown RBP13.27□□□□□ -0.28
TSC22D1-201ENST00000261489 HNRNPMP52272 730 aaKnown RBP eCLIP13.27□□□□□ -0.28
TSC22D1-201ENST00000261489 CFAP43Q8NDM7 1665 aa13.26□□□□□ -0.29
TSC22D1-201ENST00000261489 MYOM3Q5VTT5 1437 aa13.26□□□□□ -0.29
TSC22D1-201ENST00000261489 ARHGEF11O15085 1522 aa13.25□□□□□ -0.29
TSC22D1-201ENST00000261489 EHBP1L1Q8N3D4 1523 aa13.24□□□□□ -0.29
TSC22D1-201ENST00000261489 ABCC2Q92887 1545 aa13.22□□□□□ -0.29
TSC22D1-201ENST00000261489 KIF14Q15058 1648 aa13.22□□□□□ -0.29
TSC22D1-201ENST00000261489 PTPRKQ15262 1439 aa13.22□□□□□ -0.29
TSC22D1-201ENST00000261489 MYT1LQ9UL68 1186 aa13.21□□□□□ -0.29
TSC22D1-201ENST00000261489 SUPT6HQ7KZ85 1726 aaKnown RBP13.2□□□□□ -0.3
TSC22D1-201ENST00000261489 GPATCH8Q9UKJ3 1502 aaKnown RBP13.18□□□□□ -0.3
TSC22D1-201ENST00000261489 TRIM52Q96A61 297 aa13.18□□□□□ -0.3
TSC22D1-201ENST00000261489 RAB3GAP2Q9H2M9 1393 aa13.18□□□□□ -0.3
TSC22D1-201ENST00000261489 ADCY10Q96PN6 1610 aa13.17□□□□□ -0.3
TSC22D1-201ENST00000261489 ASXL2Q76L83 1435 aa13.16□□□□□ -0.3
TSC22D1-201ENST00000261489 AFAP1Q8N556 730 aa13.15□□□□□ -0.3
TSC22D1-201ENST00000261489 KDM5BQ9UGL1 1544 aa13.15□□□□□ -0.3
TSC22D1-201ENST00000261489 TSPY4P0CV99 314 aa13.15□□□□□ -0.31
TSC22D1-201ENST00000261489 TSPY10P0CW01 314 aa13.15□□□□□ -0.31
TSC22D1-201ENST00000261489 FAM69CQ0P6D2 419 aa13.14□□□□□ -0.31
TSC22D1-201ENST00000261489 NEUROD1Q13562 356 aa13.13□□□□□ -0.31
TSC22D1-201ENST00000261489 ZCCHC11Q5TAX3 1644 aaKnown RBP13.13□□□□□ -0.31
TSC22D1-201ENST00000261489 PTPN23Q9H3S7 1636 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms