RNA–Protein interactions for RNA: ENST00000261205.8

SYT1-201, Transcript of synaptotagmin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SYT1, Length 4,808 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYT1-201ENST00000261205 HMGXB3Q12766 1538 aa22.11■■□□□ 1.13
SYT1-201ENST00000261205 FMN1Q68DA7 1419 aa22.11■■□□□ 1.13
SYT1-201ENST00000261205 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.1■■□□□ 1.13
SYT1-201ENST00000261205 CHGAP10645 457 aaKnown RBP22.09■■□□□ 1.13
SYT1-201ENST00000261205 CCNB3Q8WWL7 1395 aa22.06■■□□□ 1.12
SYT1-201ENST00000261205 VPS8Q8N3P4 1428 aa22.05■■□□□ 1.12
SYT1-201ENST00000261205 RRP7BPQ9NSQ0 103 aa21.99■■□□□ 1.11
SYT1-201ENST00000261205 CFTRP13569 1480 aa21.99■■□□□ 1.11
SYT1-201ENST00000261205 CC2D2AQ9P2K1 1620 aa21.97■■□□□ 1.11
SYT1-201ENST00000261205 ERICH6Q7L0X2 663 aa21.97■■□□□ 1.11
SYT1-201ENST00000261205 NEFMP07197 916 aa21.94■■□□□ 1.1
SYT1-201ENST00000261205 BICRAQ9NZM4 1560 aa21.93■■□□□ 1.1
SYT1-201ENST00000261205 FGD5Q6ZNL6 1462 aa21.93■■□□□ 1.1
SYT1-201ENST00000261205 JPH4Q96JJ6 628 aa21.92■■□□□ 1.1
SYT1-201ENST00000261205 GAPVD1Q14C86 1478 aa21.89■■□□□ 1.1
SYT1-201ENST00000261205 ARHGAP35Q9NRY4 1499 aa21.85■■□□□ 1.09
SYT1-201ENST00000261205 CLSPNQ9HAW4 1339 aa21.84■■□□□ 1.09
SYT1-201ENST00000261205 EFCAB2Q5VUJ9 269 aa21.82■■□□□ 1.08
SYT1-201ENST00000261205 IGF1RP08069 1367 aa21.81■■□□□ 1.08
SYT1-201ENST00000261205 ARID4BQ4LE39 1312 aaPredicted RBP21.79■■□□□ 1.08
SYT1-201ENST00000261205 MRC2Q9UBG0 1479 aa21.79■■□□□ 1.08
SYT1-201ENST00000261205 OSCARQ8IYS5 282 aa21.78■■□□□ 1.08
SYT1-201ENST00000261205 RSPH4AQ5TD94 716 aa21.78■■□□□ 1.08
SYT1-201ENST00000261205 KANK1Q14678 1352 aa21.77■■□□□ 1.07
SYT1-201ENST00000261205 PLPPR3Q6T4P5 718 aa21.76■■□□□ 1.07
SYT1-201ENST00000261205 KDM2AQ9Y2K7 1162 aa21.75■■□□□ 1.07
SYT1-201ENST00000261205 PPP1R15AO75807 674 aaPredicted RBP21.74■■□□□ 1.07
SYT1-201ENST00000261205 CCDC18Q5T9S5 1454 aa21.72■■□□□ 1.07
SYT1-201ENST00000261205 RAD54L2Q9Y4B4 1467 aa21.72■■□□□ 1.07
SYT1-201ENST00000261205 EIF4G2P78344 907 aaKnown RBP eCLIP21.72■■□□□ 1.07
SYT1-201ENST00000261205 GRIN2BQ13224 1484 aa21.72■■□□□ 1.07
SYT1-201ENST00000261205 PTPRGP23470 1445 aa21.71■■□□□ 1.07
SYT1-201ENST00000261205 FHOD3Q2V2M9 1422 aa21.71■■□□□ 1.07
SYT1-201ENST00000261205 IFT140Q96RY7 1462 aa21.71■■□□□ 1.07
SYT1-201ENST00000261205 TIMELESSQ9UNS1 1208 aa21.69■■□□□ 1.06
SYT1-201ENST00000261205 TRHP20396 242 aaPredicted RBP21.68■■□□□ 1.06
SYT1-201ENST00000261205 CDCA8Q53HL2 280 aa21.66■■□□□ 1.06
SYT1-201ENST00000261205 PEG3Q9GZU2 1588 aa21.66■■□□□ 1.06
SYT1-201ENST00000261205 LAMC3Q9Y6N6 1575 aa21.65■■□□□ 1.06
SYT1-201ENST00000261205 RUSC2Q8N2Y8 1516 aa21.65■■□□□ 1.06
SYT1-201ENST00000261205 SLC24A1O60721 1099 aa21.65■■□□□ 1.06
SYT1-201ENST00000261205 KANK4Q5T7N3 995 aaPredicted RBP21.63■■□□□ 1.05
SYT1-201ENST00000261205 DAXXQ9UER7 740 aaPredicted RBP21.63■■□□□ 1.05
SYT1-201ENST00000261205 NESP48681 1621 aa21.62■■□□□ 1.05
SYT1-201ENST00000261205 HDGFP51858 240 aaKnown RBP21.62■■□□□ 1.05
SYT1-201ENST00000261205 ANKRD30AQ9BXX3 1397 aa21.62■■□□□ 1.05
SYT1-201ENST00000261205 TOPBP1Q92547 1522 aa21.61■■□□□ 1.05
SYT1-201ENST00000261205 SETD5Q9C0A6 1442 aa21.61■■□□□ 1.05
SYT1-201ENST00000261205 AQRO60306 1485 aaKnown RBP eCLIP21.59■■□□□ 1.05
SYT1-201ENST00000261205 RGL3Q3MIN7 710 aa21.58■■□□□ 1.04
SYT1-201ENST00000261205 DDX10Q13206 875 aaKnown RBP21.57■■□□□ 1.04
SYT1-201ENST00000261205 DNMBPQ6XZF7 1577 aa21.56■■□□□ 1.04
SYT1-201ENST00000261205 TOP2BQ02880 1626 aa21.56■■□□□ 1.04
SYT1-201ENST00000261205 ERICH3Q5RHP9 1530 aa21.55■■□□□ 1.04
SYT1-201ENST00000261205 ZBTB47Q9UFB7 747 aaPredicted RBP21.52■■□□□ 1.03
SYT1-201ENST00000261205 POLA1P09884 1462 aaPredicted RBP21.51■■□□□ 1.03
SYT1-201ENST00000261205 SYNJ1O43426 1573 aa21.49■■□□□ 1.03
SYT1-201ENST00000261205 TMC1Q8TDI8 760 aa21.48■■□□□ 1.03
SYT1-201ENST00000261205 CANXP27824 592 aaKnown RBP21.48■■□□□ 1.03
SYT1-201ENST00000261205 UNC13AQ9UPW8 1703 aa21.47■■□□□ 1.03
SYT1-201ENST00000261205 CARD11Q9BXL7 1154 aa21.47■■□□□ 1.03
SYT1-201ENST00000261205 SPAG9O60271 1321 aaKnown RBP21.47■■□□□ 1.03
SYT1-201ENST00000261205 CUX1P39880 1505 aa21.47■■□□□ 1.03
SYT1-201ENST00000261205 KIF21BO75037 1637 aa21.47■■□□□ 1.03
SYT1-201ENST00000261205 GGT6Q6P531 493 aa21.42■■□□□ 1.02
SYT1-201ENST00000261205 WDR43Q15061 677 aaKnown RBP eCLIP21.41■■□□□ 1.02
SYT1-201ENST00000261205 C14orf37Q86TY3 774 aa21.4■■□□□ 1.02
SYT1-201ENST00000261205 CYB5RLQ6IPT4 315 aa21.4■■□□□ 1.02
SYT1-201ENST00000261205 PKD2Q13563 968 aa21.39■■□□□ 1.01
SYT1-201ENST00000261205 NUP155O75694 1391 aa21.39■■□□□ 1.01
SYT1-201ENST00000261205 PRXQ9BXM0 1461 aa21.38■■□□□ 1.01
SYT1-201ENST00000261205 DNAJC5BQ9UF47 199 aa21.38■■□□□ 1.01
SYT1-201ENST00000261205 ABCA10Q8WWZ4 1543 aa21.37■■□□□ 1.01
SYT1-201ENST00000261205 HNRNPMP52272 730 aaKnown RBP eCLIP21.37■■□□□ 1.01
SYT1-201ENST00000261205 POGKQ9P215 609 aa21.36■■□□□ 1.01
SYT1-201ENST00000261205 SIN3AQ96ST3 1273 aa21.35■■□□□ 1.01
SYT1-201ENST00000261205 EFCAB5A4FU69 1503 aa21.35■■□□□ 1.01
SYT1-201ENST00000261205 MLECQ14165 292 aa21.35■■□□□ 1.01
SYT1-201ENST00000261205 MPHOSPH9Q99550 1183 aa21.34■■□□□ 1.01
SYT1-201ENST00000261205 CASKIN1Q8WXD9 1431 aa21.34■■□□□ 1.01
SYT1-201ENST00000261205 RAB3GAP2Q9H2M9 1393 aa21.34■■□□□ 1.01
SYT1-201ENST00000261205 KIF3BO15066 747 aa21.33■■□□□ 1.01
SYT1-201ENST00000261205 MRS2Q9HD23 443 aa21.33■■□□□ 1.01
SYT1-201ENST00000261205 DCAF11Q8TEB1 546 aa21.32■■□□□ 1
SYT1-201ENST00000261205 KNSTRNQ9Y448 316 aa21.32■■□□□ 1
SYT1-201ENST00000261205 HNRNPUQ00839 825 aaKnown RBP eCLIP21.3■■□□□ 1
SYT1-201ENST00000261205 FAM9BQ8IZU0 186 aa21.3■■□□□ 1
SYT1-201ENST00000261205 CFAP53Q96M91 514 aa21.3■■□□□ 1
SYT1-201ENST00000261205 SNAPC4Q5SXM2 1469 aa21.29■■□□□ 1
SYT1-201ENST00000261205 PRG4Q92954 1404 aaPredicted RBP21.29■■□□□ 1
SYT1-201ENST00000261205 MYOM3Q5VTT5 1437 aa21.28■■□□□ 1
SYT1-201ENST00000261205 SYNJ2O15056 1496 aa21.27■■□□□ 1
SYT1-201ENST00000261205 TMF1P82094 1093 aa21.27■■□□□ 1
SYT1-201ENST00000261205 FYCO1Q9BQS8 1478 aa21.24■□□□□ 0.99
SYT1-201ENST00000261205 KIAA0586Q9BVV6 1533 aa21.24■□□□□ 0.99
SYT1-201ENST00000261205 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.24■□□□□ 0.99
SYT1-201ENST00000261205 WASHC2CQ9Y4E1 1318 aa21.23■□□□□ 0.99
SYT1-201ENST00000261205 HIRIP3Q9BW71 556 aaPredicted RBP21.21■□□□□ 0.99
SYT1-201ENST00000261205 MAGI1Q96QZ7 1491 aaPredicted RBP21.2■□□□□ 0.98
SYT1-201ENST00000261205 LRRC9Q6ZRR7 1453 aa21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms