RNA–Protein interactions for RNA: ENST00000260649.10

SLC3A1-201, Transcript of solute carrier family 3 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC3A1, Length 2,989 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A1-201ENST00000260649 URB2Q14146 1524 aaKnown RBP16.7■□□□□ 0.26
SLC3A1-201ENST00000260649 ABCA10Q8WWZ4 1543 aa16.69■□□□□ 0.26
SLC3A1-201ENST00000260649 ACIN1Q9UKV3 1341 aaKnown RBP16.67■□□□□ 0.26
SLC3A1-201ENST00000260649 MIER1Q8N108 512 aa16.67■□□□□ 0.26
SLC3A1-201ENST00000260649 TIAM1Q13009 1591 aa16.66■□□□□ 0.26
SLC3A1-201ENST00000260649 PHLDB1Q86UU1 1377 aa16.65■□□□□ 0.26
SLC3A1-201ENST00000260649 LRRC9Q6ZRR7 1453 aa16.63■□□□□ 0.25
SLC3A1-201ENST00000260649 PCF11O94913 1555 aaKnown RBP16.62■□□□□ 0.25
SLC3A1-201ENST00000260649 FHAD1B1AJZ9 1412 aa16.62■□□□□ 0.25
SLC3A1-201ENST00000260649 LAMC3Q9Y6N6 1575 aa16.62■□□□□ 0.25
SLC3A1-201ENST00000260649 PDS5BQ9NTI5 1447 aa16.61■□□□□ 0.25
SLC3A1-201ENST00000260649 CENPBP07199 599 aaPredicted RBP16.61■□□□□ 0.25
SLC3A1-201ENST00000260649 RAB3GAP2Q9H2M9 1393 aa16.6■□□□□ 0.25
SLC3A1-201ENST00000260649 GAPVD1Q14C86 1478 aa16.57■□□□□ 0.24
SLC3A1-201ENST00000260649 KIF21AQ7Z4S6 1674 aa16.56■□□□□ 0.24
SLC3A1-201ENST00000260649 ARID3CA6NKF2 412 aa16.56■□□□□ 0.24
SLC3A1-201ENST00000260649 GTF3C3Q9Y5Q9 886 aa16.56■□□□□ 0.24
SLC3A1-201ENST00000260649 CLSPNQ9HAW4 1339 aa16.54■□□□□ 0.24
SLC3A1-201ENST00000260649 CUL7Q14999 1698 aa16.53■□□□□ 0.24
SLC3A1-201ENST00000260649 SIN3AQ96ST3 1273 aa16.52■□□□□ 0.23
SLC3A1-201ENST00000260649 MAP3K1Q13233 1512 aa16.51■□□□□ 0.23
SLC3A1-201ENST00000260649 CTTNBP2Q8WZ74 1663 aa16.5■□□□□ 0.23
SLC3A1-201ENST00000260649 SETD5Q9C0A6 1442 aa16.5■□□□□ 0.23
SLC3A1-201ENST00000260649 AQRO60306 1485 aaKnown RBP eCLIP16.5■□□□□ 0.23
SLC3A1-201ENST00000260649 CASKIN1Q8WXD9 1431 aa16.5■□□□□ 0.23
SLC3A1-201ENST00000260649 MTUS2Q5JR59 1369 aa16.49■□□□□ 0.23
SLC3A1-201ENST00000260649 WDR97A6NE52 1622 aa16.48■□□□□ 0.23
SLC3A1-201ENST00000260649 FYCO1Q9BQS8 1478 aa16.48■□□□□ 0.23
SLC3A1-201ENST00000260649 EFCAB5A4FU69 1503 aa16.48■□□□□ 0.23
SLC3A1-201ENST00000260649 CFAP43Q8NDM7 1665 aa16.47■□□□□ 0.23
SLC3A1-201ENST00000260649 ABCA5Q8WWZ7 1642 aa16.47■□□□□ 0.23
SLC3A1-201ENST00000260649 FMN1Q68DA7 1419 aa16.47■□□□□ 0.23
SLC3A1-201ENST00000260649 MAPKBP1O60336 1514 aa16.41■□□□□ 0.22
SLC3A1-201ENST00000260649 SNAPC4Q5SXM2 1469 aa16.41■□□□□ 0.22
SLC3A1-201ENST00000260649 TARBP1Q13395 1621 aaKnown RBP16.4■□□□□ 0.22
SLC3A1-201ENST00000260649 HIRIP3Q9BW71 556 aaPredicted RBP16.39■□□□□ 0.21
SLC3A1-201ENST00000260649 CHIC2Q9UKJ5 165 aa16.38■□□□□ 0.21
SLC3A1-201ENST00000260649 FGD6Q6ZV73 1430 aa16.38■□□□□ 0.21
SLC3A1-201ENST00000260649 ZNF608Q9ULD9 1512 aaPredicted RBP16.35■□□□□ 0.21
SLC3A1-201ENST00000260649 SAMD9Q5K651 1589 aa16.34■□□□□ 0.21
SLC3A1-201ENST00000260649 MRC2Q9UBG0 1479 aa16.34■□□□□ 0.21
SLC3A1-201ENST00000260649 LRRIQ1Q96JM4 1722 aa16.34■□□□□ 0.21
SLC3A1-201ENST00000260649 NCOA2Q15596 1464 aa16.33■□□□□ 0.21
SLC3A1-201ENST00000260649 RRP7BPQ9NSQ0 103 aa16.33■□□□□ 0.21
SLC3A1-201ENST00000260649 PTPRKQ15262 1439 aa16.33■□□□□ 0.2
SLC3A1-201ENST00000260649 FBLN2P98095 1184 aa16.32■□□□□ 0.2
SLC3A1-201ENST00000260649 GRIN2BQ13224 1484 aa16.32■□□□□ 0.2
SLC3A1-201ENST00000260649 PBRM1Q86U86 1689 aa16.31■□□□□ 0.2
SLC3A1-201ENST00000260649 DDX10Q13206 875 aaKnown RBP16.28■□□□□ 0.2
SLC3A1-201ENST00000260649 MYOM3Q5VTT5 1437 aa16.28■□□□□ 0.2
SLC3A1-201ENST00000260649 MAGI3Q5TCQ9 1506 aa16.27■□□□□ 0.2
SLC3A1-201ENST00000260649 CDK13Q14004 1512 aaKnown RBP16.27■□□□□ 0.19
SLC3A1-201ENST00000260649 IQGAP2Q13576 1575 aa16.26■□□□□ 0.19
SLC3A1-201ENST00000260649 KCNH8Q96L42 1107 aa16.26■□□□□ 0.19
SLC3A1-201ENST00000260649 CCDC18Q5T9S5 1454 aa16.26■□□□□ 0.19
SLC3A1-201ENST00000260649 ERCC6Q03468 1493 aa16.26■□□□□ 0.19
SLC3A1-201ENST00000260649 TRIM52Q96A61 297 aa16.26■□□□□ 0.19
SLC3A1-201ENST00000260649 ADAMTS12P58397 1594 aa16.25■□□□□ 0.19
SLC3A1-201ENST00000260649 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.24■□□□□ 0.19
SLC3A1-201ENST00000260649 SUPT6HQ7KZ85 1726 aaKnown RBP16.23■□□□□ 0.19
SLC3A1-201ENST00000260649 EHBP1L1Q8N3D4 1523 aa16.22■□□□□ 0.19
SLC3A1-201ENST00000260649 PPP1R15AO75807 674 aaPredicted RBP16.22■□□□□ 0.19
SLC3A1-201ENST00000260649 TONSLQ96HA7 1378 aa16.21■□□□□ 0.19
SLC3A1-201ENST00000260649 CHMP7Q8WUX9 453 aaPredicted RBP16.21■□□□□ 0.19
SLC3A1-201ENST00000260649 IFT140Q96RY7 1462 aa16.21■□□□□ 0.19
SLC3A1-201ENST00000260649 EPRSP07814 1512 aaKnown RBP16.21■□□□□ 0.18
SLC3A1-201ENST00000260649 NAIPQ13075 1403 aa16.2■□□□□ 0.18
SLC3A1-201ENST00000260649 HFM1A2PYH4 1435 aa16.19■□□□□ 0.18
SLC3A1-201ENST00000260649 PTPN23Q9H3S7 1636 aa16.19■□□□□ 0.18
SLC3A1-201ENST00000260649 UGGT2Q9NYU1 1516 aa16.18■□□□□ 0.18
SLC3A1-201ENST00000260649 FOXD1Q16676 465 aa16.17■□□□□ 0.18
SLC3A1-201ENST00000260649 HECW1Q76N89 1606 aa16.17■□□□□ 0.18
SLC3A1-201ENST00000260649 ZNF644Q9H582 1327 aaPredicted RBP16.17■□□□□ 0.18
SLC3A1-201ENST00000260649 THOC2Q8NI27 1593 aaKnown RBP16.16■□□□□ 0.18
SLC3A1-201ENST00000260649 UACAQ9BZF9 1416 aa16.16■□□□□ 0.18
SLC3A1-201ENST00000260649 WDR62O43379 1518 aa16.15■□□□□ 0.18
SLC3A1-201ENST00000260649 EIF4G3O43432 1585 aaKnown RBP16.13■□□□□ 0.17
SLC3A1-201ENST00000260649 ZNF777Q9ULD5 760 aaPredicted RBP16.13■□□□□ 0.17
SLC3A1-201ENST00000260649 GRIN2AQ12879 1464 aa16.12■□□□□ 0.17
SLC3A1-201ENST00000260649 KIAA0586Q9BVV6 1533 aa16.12■□□□□ 0.17
SLC3A1-201ENST00000260649 TIMELESSQ9UNS1 1208 aa16.11■□□□□ 0.17
SLC3A1-201ENST00000260649 DISP1Q96F81 1524 aa16.11■□□□□ 0.17
SLC3A1-201ENST00000260649 ARHGEF11O15085 1522 aa16.1■□□□□ 0.17
SLC3A1-201ENST00000260649 KDM6BO15054 1643 aa16.08■□□□□ 0.16
SLC3A1-201ENST00000260649 KIAA0556O60303 1618 aa16.08■□□□□ 0.16
SLC3A1-201ENST00000260649 NUP153P49790 1475 aaKnown RBP16.07■□□□□ 0.16
SLC3A1-201ENST00000260649 MPHOSPH9Q99550 1183 aa16.06■□□□□ 0.16
SLC3A1-201ENST00000260649 CDK11AQ9UQ88 783 aaPredicted RBP16.06■□□□□ 0.16
SLC3A1-201ENST00000260649 PRG4Q92954 1404 aaPredicted RBP16.06■□□□□ 0.16
SLC3A1-201ENST00000260649 PLB1Q6P1J6 1458 aa16.06■□□□□ 0.16
SLC3A1-201ENST00000260649 JPH4Q96JJ6 628 aa16.05■□□□□ 0.16
SLC3A1-201ENST00000260649 TCOF1Q13428 1488 aaKnown RBP16.04■□□□□ 0.16
SLC3A1-201ENST00000260649 CFDP1Q9UEE9 299 aaPredicted RBP16.03■□□□□ 0.16
SLC3A1-201ENST00000260649 MIA2Q96PC5 1412 aa16.02■□□□□ 0.16
SLC3A1-201ENST00000260649 CEP170Q5SW79 1584 aa16.01■□□□□ 0.15
SLC3A1-201ENST00000260649 ANP32CO43423 234 aa16.01■□□□□ 0.15
SLC3A1-201ENST00000260649 PELP1Q8IZL8 1130 aaKnown RBP16.01■□□□□ 0.15
SLC3A1-201ENST00000260649 RAPGEF6Q8TEU7 1601 aa16.01■□□□□ 0.15
SLC3A1-201ENST00000260649 DENND4BO75064 1496 aaPredicted RBP16■□□□□ 0.15
SLC3A1-201ENST00000260649 SLC4A1APQ9BWU0 796 aaKnown RBP15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms