RNA–Protein interactions for RNA: ENST00000260054.8

CCDC90B-201, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 1,688 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-201ENST00000260054 OSCARQ8IYS5 282 aa25.7■■□□□ 1.7
CCDC90B-201ENST00000260054 CTTNBP2Q8WZ74 1663 aa25.68■■□□□ 1.7
CCDC90B-201ENST00000260054 KIAA0586Q9BVV6 1533 aa25.68■■□□□ 1.7
CCDC90B-201ENST00000260054 TNIKQ9UKE5 1360 aa25.66■■□□□ 1.7
CCDC90B-201ENST00000260054 CLASP1Q7Z460 1538 aa25.65■■□□□ 1.7
CCDC90B-201ENST00000260054 IQGAP2Q13576 1575 aa25.62■■□□□ 1.69
CCDC90B-201ENST00000260054 JPH4Q96JJ6 628 aa25.54■■□□□ 1.68
CCDC90B-201ENST00000260054 RANGAP1P46060 587 aaPredicted RBP25.53■■□□□ 1.68
CCDC90B-201ENST00000260054 SHROOM2Q13796 1616 aa25.51■■□□□ 1.67
CCDC90B-201ENST00000260054 UGGT2Q9NYU1 1516 aa25.5■■□□□ 1.67
CCDC90B-201ENST00000260054 CEP162Q5TB80 1403 aa25.47■■□□□ 1.67
CCDC90B-201ENST00000260054 PRG4Q92954 1404 aaPredicted RBP25.44■■□□□ 1.66
CCDC90B-201ENST00000260054 CLIP1P30622 1438 aa25.43■■□□□ 1.66
CCDC90B-201ENST00000260054 DISP1Q96F81 1524 aa25.42■■□□□ 1.66
CCDC90B-201ENST00000260054 SAMD9Q5K651 1589 aa25.41■■□□□ 1.66
CCDC90B-201ENST00000260054 ARHGAP35Q9NRY4 1499 aa25.4■■□□□ 1.66
CCDC90B-201ENST00000260054 ERCC6L2Q5T890 1561 aa25.39■■□□□ 1.65
CCDC90B-201ENST00000260054 EFCAB5A4FU69 1503 aa25.38■■□□□ 1.65
CCDC90B-201ENST00000260054 KIAA0556O60303 1618 aa25.38■■□□□ 1.65
CCDC90B-201ENST00000260054 CARMIL2Q6F5E8 1435 aa25.36■■□□□ 1.65
CCDC90B-201ENST00000260054 P3H3Q8IVL6 736 aa25.36■■□□□ 1.65
CCDC90B-201ENST00000260054 FHOD3Q2V2M9 1422 aa25.32■■□□□ 1.64
CCDC90B-201ENST00000260054 ARAP1Q96P48 1450 aa25.3■■□□□ 1.64
CCDC90B-201ENST00000260054 ARHGEF11O15085 1522 aa25.3■■□□□ 1.64
CCDC90B-201ENST00000260054 TTBK1Q5TCY1 1321 aaPredicted RBP25.23■■□□□ 1.63
CCDC90B-201ENST00000260054 RIMBP3CA6NJZ7 1639 aa25.22■■□□□ 1.63
CCDC90B-201ENST00000260054 RIMBP3BA6NNM3 1639 aa25.22■■□□□ 1.63
CCDC90B-201ENST00000260054 RIMBP3Q9UFD9 1639 aa25.22■■□□□ 1.63
CCDC90B-201ENST00000260054 PTPRGP23470 1445 aa25.2■■□□□ 1.62
CCDC90B-201ENST00000260054 DNAJC5Q9H3Z4 198 aa25.17■■□□□ 1.62
CCDC90B-201ENST00000260054 FMN1Q68DA7 1419 aa25.15■■□□□ 1.62
CCDC90B-201ENST00000260054 VPS8Q8N3P4 1428 aa25.11■■□□□ 1.61
CCDC90B-201ENST00000260054 PLB1Q6P1J6 1458 aa25.1■■□□□ 1.61
CCDC90B-201ENST00000260054 ABCA8O94911 1581 aa25.06■■□□□ 1.6
CCDC90B-201ENST00000260054 PCF11O94913 1555 aaKnown RBP25.05■■□□□ 1.6
CCDC90B-201ENST00000260054 UACAQ9BZF9 1416 aa25.05■■□□□ 1.6
CCDC90B-201ENST00000260054 CYB5RLQ6IPT4 315 aa25.04■■□□□ 1.6
CCDC90B-201ENST00000260054 RAPGEF6Q8TEU7 1601 aa25.04■■□□□ 1.6
CCDC90B-201ENST00000260054 CASKIN1Q8WXD9 1431 aa25.04■■□□□ 1.6
CCDC90B-201ENST00000260054 FYCO1Q9BQS8 1478 aa25■■□□□ 1.59
CCDC90B-201ENST00000260054 ABCC2Q92887 1545 aa24.99■■□□□ 1.59
CCDC90B-201ENST00000260054 UHRF1BP1LA0JNW5 1464 aa24.98■■□□□ 1.59
CCDC90B-201ENST00000260054 NUP153P49790 1475 aaKnown RBP24.98■■□□□ 1.59
CCDC90B-201ENST00000260054 ATP1B4Q9UN42 357 aaPredicted RBP24.98■■□□□ 1.59
CCDC90B-201ENST00000260054 ADCY10Q96PN6 1610 aa24.97■■□□□ 1.59
CCDC90B-201ENST00000260054 HECW1Q76N89 1606 aa24.96■■□□□ 1.59
CCDC90B-201ENST00000260054 ARID3CA6NKF2 412 aa24.93■■□□□ 1.58
CCDC90B-201ENST00000260054 LRRIQ1Q96JM4 1722 aa24.91■■□□□ 1.58
CCDC90B-201ENST00000260054 EPRSP07814 1512 aaKnown RBP24.9■■□□□ 1.58
CCDC90B-201ENST00000260054 ATP10BO94823 1461 aa24.88■■□□□ 1.57
CCDC90B-201ENST00000260054 CDK13Q14004 1512 aaKnown RBP24.88■■□□□ 1.57
CCDC90B-201ENST00000260054 KDM5BQ9UGL1 1544 aa24.88■■□□□ 1.57
CCDC90B-201ENST00000260054 CCDC18Q5T9S5 1454 aa24.85■■□□□ 1.57
CCDC90B-201ENST00000260054 ZCCHC11Q5TAX3 1644 aaKnown RBP24.82■■□□□ 1.56
CCDC90B-201ENST00000260054 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.81■■□□□ 1.56
CCDC90B-201ENST00000260054 HNRNPUL2Q1KMD3 747 aaKnown RBP24.81■■□□□ 1.56
CCDC90B-201ENST00000260054 TIAM1Q13009 1591 aa24.8■■□□□ 1.56
CCDC90B-201ENST00000260054 MAP3K1Q13233 1512 aa24.79■■□□□ 1.56
CCDC90B-201ENST00000260054 CFAP43Q8NDM7 1665 aa24.79■■□□□ 1.56
CCDC90B-201ENST00000260054 APLP2Q06481 763 aa24.78■■□□□ 1.56
CCDC90B-201ENST00000260054 NPM1P06748 294 aaKnown RBP eCLIP24.78■■□□□ 1.56
CCDC90B-201ENST00000260054 MAGI3Q5TCQ9 1506 aa24.73■■□□□ 1.55
CCDC90B-201ENST00000260054 KANK4Q5T7N3 995 aaPredicted RBP24.72■■□□□ 1.55
CCDC90B-201ENST00000260054 CDK11AQ9UQ88 783 aaPredicted RBP24.7■■□□□ 1.54
CCDC90B-201ENST00000260054 ASXL2Q76L83 1435 aa24.7■■□□□ 1.54
CCDC90B-201ENST00000260054 LRRC9Q6ZRR7 1453 aa24.69■■□□□ 1.54
CCDC90B-201ENST00000260054 PLEKHD1A6NEE1 506 aa24.69■■□□□ 1.54
CCDC90B-201ENST00000260054 MAPKBP1O60336 1514 aa24.67■■□□□ 1.54
CCDC90B-201ENST00000260054 MTUS2Q5JR59 1369 aa24.67■■□□□ 1.54
CCDC90B-201ENST00000260054 TROQ12816 1431 aaPredicted RBP24.66■■□□□ 1.54
CCDC90B-201ENST00000260054 PPARGC1BQ86YN6 1023 aaKnown RBP24.66■■□□□ 1.54
CCDC90B-201ENST00000260054 WDR7Q9Y4E6 1490 aa24.65■■□□□ 1.54
CCDC90B-201ENST00000260054 EHBP1L1Q8N3D4 1523 aa24.64■■□□□ 1.54
CCDC90B-201ENST00000260054 KCNH8Q96L42 1107 aa24.59■■□□□ 1.53
CCDC90B-201ENST00000260054 KIF14Q15058 1648 aa24.57■■□□□ 1.52
CCDC90B-201ENST00000260054 SUPT6HQ7KZ85 1726 aaKnown RBP24.53■■□□□ 1.52
CCDC90B-201ENST00000260054 NCOA2Q15596 1464 aa24.52■■□□□ 1.52
CCDC90B-201ENST00000260054 ABCC10Q5T3U5 1492 aa24.5■■□□□ 1.51
CCDC90B-201ENST00000260054 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.5■■□□□ 1.51
CCDC90B-201ENST00000260054 TTC37Q6PGP7 1564 aa24.48■■□□□ 1.51
CCDC90B-201ENST00000260054 DIP2BQ9P265 1576 aa24.48■■□□□ 1.51
CCDC90B-201ENST00000260054 ABCA9Q8IUA7 1624 aa24.45■■□□□ 1.5
CCDC90B-201ENST00000260054 PHLDB1Q86UU1 1377 aa24.44■■□□□ 1.5
CCDC90B-201ENST00000260054 FAM69CQ0P6D2 419 aa24.43■■□□□ 1.5
CCDC90B-201ENST00000260054 GLI2P10070 1586 aa24.43■■□□□ 1.5
CCDC90B-201ENST00000260054 CCNB3Q8WWL7 1395 aa24.41■■□□□ 1.5
CCDC90B-201ENST00000260054 GPATCH8Q9UKJ3 1502 aaKnown RBP24.4■■□□□ 1.5
CCDC90B-201ENST00000260054 KIF13AQ9H1H9 1805 aa24.39■■□□□ 1.5
CCDC90B-201ENST00000260054 MYOM3Q5VTT5 1437 aa24.38■■□□□ 1.49
CCDC90B-201ENST00000260054 CDC42BPAQ5VT25 1732 aa24.37■■□□□ 1.49
CCDC90B-201ENST00000260054 CD109Q6YHK3 1445 aa24.36■■□□□ 1.49
CCDC90B-201ENST00000260054 MAP3K4Q9Y6R4 1608 aa24.36■■□□□ 1.49
CCDC90B-201ENST00000260054 MYO5CQ9NQX4 1742 aa24.35■■□□□ 1.49
CCDC90B-201ENST00000260054 PLCH2O75038 1416 aa24.35■■□□□ 1.49
CCDC90B-201ENST00000260054 PREX2Q70Z35 1606 aa24.34■■□□□ 1.49
CCDC90B-201ENST00000260054 ITSN2Q9NZM3 1697 aa24.33■■□□□ 1.49
CCDC90B-201ENST00000260054 CDC42BPBQ9Y5S2 1711 aa24.32■■□□□ 1.48
CCDC90B-201ENST00000260054 TRHP20396 242 aaPredicted RBP24.31■■□□□ 1.48
CCDC90B-201ENST00000260054 CFDP1Q9UEE9 299 aaPredicted RBP24.3■■□□□ 1.48
CCDC90B-201ENST00000260054 FGD6Q6ZV73 1430 aa24.3■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms