RNA–Protein interactions for RNA: ENST00000259951.11

HLA-F-216, Transcript of major histocompatibility complex, class I, F, humanhuman

APPRIS P4 BASIC

Gene HLA-F, Length 1,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-216ENST00000259951 RANGAP1P46060 587 aaPredicted RBP26.45■■□□□ 1.82
HLA-F-216ENST00000259951 CHMP7Q8WUX9 453 aaPredicted RBP26.44■■□□□ 1.82
HLA-F-216ENST00000259951 EFCAB5A4FU69 1503 aa26.38■■□□□ 1.81
HLA-F-216ENST00000259951 ARHGAP35Q9NRY4 1499 aa26.38■■□□□ 1.81
HLA-F-216ENST00000259951 IQGAP2Q13576 1575 aa26.37■■□□□ 1.81
HLA-F-216ENST00000259951 VPS8Q8N3P4 1428 aa26.35■■□□□ 1.81
HLA-F-216ENST00000259951 FBLN2P98095 1184 aa26.35■■□□□ 1.81
HLA-F-216ENST00000259951 ARAP1Q96P48 1450 aa26.34■■□□□ 1.81
HLA-F-216ENST00000259951 KIAA0586Q9BVV6 1533 aa26.34■■□□□ 1.81
HLA-F-216ENST00000259951 CHD1O14646 1710 aa26.3■■□□□ 1.8
HLA-F-216ENST00000259951 NUP160Q12769 1436 aa26.29■■□□□ 1.8
HLA-F-216ENST00000259951 CEP170Q5SW79 1584 aa26.29■■□□□ 1.8
HLA-F-216ENST00000259951 SAMD9Q5K651 1589 aa26.28■■□□□ 1.8
HLA-F-216ENST00000259951 UGGT2Q9NYU1 1516 aa26.24■■□□□ 1.79
HLA-F-216ENST00000259951 OSCARQ8IYS5 282 aa26.21■■□□□ 1.79
HLA-F-216ENST00000259951 FHOD3Q2V2M9 1422 aa26.16■■□□□ 1.78
HLA-F-216ENST00000259951 P3H3Q8IVL6 736 aa26.15■■□□□ 1.78
HLA-F-216ENST00000259951 APLP2Q06481 763 aa26.14■■□□□ 1.78
HLA-F-216ENST00000259951 FMN1Q68DA7 1419 aa26.13■■□□□ 1.77
HLA-F-216ENST00000259951 KIAA0556O60303 1618 aa26.08■■□□□ 1.77
HLA-F-216ENST00000259951 JPH4Q96JJ6 628 aa26.06■■□□□ 1.76
HLA-F-216ENST00000259951 DISP1Q96F81 1524 aa26.06■■□□□ 1.76
HLA-F-216ENST00000259951 CARMIL2Q6F5E8 1435 aa26.05■■□□□ 1.76
HLA-F-216ENST00000259951 FYCO1Q9BQS8 1478 aa26.03■■□□□ 1.76
HLA-F-216ENST00000259951 PCF11O94913 1555 aaKnown RBP26.03■■□□□ 1.76
HLA-F-216ENST00000259951 CASKIN1Q8WXD9 1431 aa26.02■■□□□ 1.76
HLA-F-216ENST00000259951 SHROOM2Q13796 1616 aa25.99■■□□□ 1.75
HLA-F-216ENST00000259951 MAP3K1Q13233 1512 aa25.99■■□□□ 1.75
HLA-F-216ENST00000259951 CLASP1Q7Z460 1538 aa25.98■■□□□ 1.75
HLA-F-216ENST00000259951 PPARGC1BQ86YN6 1023 aaKnown RBP25.96■■□□□ 1.75
HLA-F-216ENST00000259951 TRIM26Q12899 539 aaPredicted RBP25.95■■□□□ 1.74
HLA-F-216ENST00000259951 TIAM1Q13009 1591 aa25.92■■□□□ 1.74
HLA-F-216ENST00000259951 PRG4Q92954 1404 aaPredicted RBP25.92■■□□□ 1.74
HLA-F-216ENST00000259951 CFAP43Q8NDM7 1665 aa25.91■■□□□ 1.74
HLA-F-216ENST00000259951 HECW1Q76N89 1606 aa25.89■■□□□ 1.74
HLA-F-216ENST00000259951 ATP1B4Q9UN42 357 aaPredicted RBP25.89■■□□□ 1.74
HLA-F-216ENST00000259951 CCDC18Q5T9S5 1454 aa25.83■■□□□ 1.73
HLA-F-216ENST00000259951 RAPGEF6Q8TEU7 1601 aa25.83■■□□□ 1.72
HLA-F-216ENST00000259951 LRRIQ1Q96JM4 1722 aa25.81■■□□□ 1.72
HLA-F-216ENST00000259951 TTBK1Q5TCY1 1321 aaPredicted RBP25.81■■□□□ 1.72
HLA-F-216ENST00000259951 PCGF6Q9BYE7 350 aa25.8■■□□□ 1.72
HLA-F-216ENST00000259951 LRRC9Q6ZRR7 1453 aa25.78■■□□□ 1.72
HLA-F-216ENST00000259951 KANK4Q5T7N3 995 aaPredicted RBP25.77■■□□□ 1.72
HLA-F-216ENST00000259951 PTPRGP23470 1445 aa25.76■■□□□ 1.71
HLA-F-216ENST00000259951 RIMBP3CA6NJZ7 1639 aa25.75■■□□□ 1.71
HLA-F-216ENST00000259951 RIMBP3BA6NNM3 1639 aa25.75■■□□□ 1.71
HLA-F-216ENST00000259951 RIMBP3Q9UFD9 1639 aa25.75■■□□□ 1.71
HLA-F-216ENST00000259951 EPRSP07814 1512 aaKnown RBP25.74■■□□□ 1.71
HLA-F-216ENST00000259951 ARHGEF11O15085 1522 aa25.73■■□□□ 1.71
HLA-F-216ENST00000259951 ABCA8O94911 1581 aa25.72■■□□□ 1.71
HLA-F-216ENST00000259951 ERCC6L2Q5T890 1561 aa25.71■■□□□ 1.71
HLA-F-216ENST00000259951 PLB1Q6P1J6 1458 aa25.7■■□□□ 1.71
HLA-F-216ENST00000259951 NUP153P49790 1475 aaKnown RBP25.7■■□□□ 1.7
HLA-F-216ENST00000259951 MTUS2Q5JR59 1369 aa25.67■■□□□ 1.7
HLA-F-216ENST00000259951 EHBP1L1Q8N3D4 1523 aa25.66■■□□□ 1.7
HLA-F-216ENST00000259951 CDK13Q14004 1512 aaKnown RBP25.64■■□□□ 1.7
HLA-F-216ENST00000259951 UACAQ9BZF9 1416 aa25.62■■□□□ 1.69
HLA-F-216ENST00000259951 CDK11AQ9UQ88 783 aaPredicted RBP25.61■■□□□ 1.69
HLA-F-216ENST00000259951 SUPT6HQ7KZ85 1726 aaKnown RBP25.6■■□□□ 1.69
HLA-F-216ENST00000259951 CYB5RLQ6IPT4 315 aa25.59■■□□□ 1.69
HLA-F-216ENST00000259951 ABCC2Q92887 1545 aa25.56■■□□□ 1.68
HLA-F-216ENST00000259951 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.55■■□□□ 1.68
HLA-F-216ENST00000259951 HNRNPUL2Q1KMD3 747 aaKnown RBP25.55■■□□□ 1.68
HLA-F-216ENST00000259951 ARID3CA6NKF2 412 aa25.55■■□□□ 1.68
HLA-F-216ENST00000259951 MAGI3Q5TCQ9 1506 aa25.54■■□□□ 1.68
HLA-F-216ENST00000259951 UHRF1BP1LA0JNW5 1464 aa25.52■■□□□ 1.68
HLA-F-216ENST00000259951 RRBP1Q9P2E9 1410 aaKnown RBP25.52■■□□□ 1.68
HLA-F-216ENST00000259951 ATP10BO94823 1461 aa25.51■■□□□ 1.68
HLA-F-216ENST00000259951 NCOA2Q15596 1464 aa25.49■■□□□ 1.67
HLA-F-216ENST00000259951 PHLDB1Q86UU1 1377 aa25.48■■□□□ 1.67
HLA-F-216ENST00000259951 TROQ12816 1431 aaPredicted RBP25.47■■□□□ 1.67
HLA-F-216ENST00000259951 CCNB3Q8WWL7 1395 aa25.46■■□□□ 1.67
HLA-F-216ENST00000259951 PLEKHD1A6NEE1 506 aa25.44■■□□□ 1.66
HLA-F-216ENST00000259951 ADCY10Q96PN6 1610 aa25.43■■□□□ 1.66
HLA-F-216ENST00000259951 MYOM3Q5VTT5 1437 aa25.41■■□□□ 1.66
HLA-F-216ENST00000259951 KDM5BQ9UGL1 1544 aa25.39■■□□□ 1.66
HLA-F-216ENST00000259951 ZCCHC11Q5TAX3 1644 aaKnown RBP25.38■■□□□ 1.65
HLA-F-216ENST00000259951 FGD6Q6ZV73 1430 aa25.37■■□□□ 1.65
HLA-F-216ENST00000259951 KIF14Q15058 1648 aa25.36■■□□□ 1.65
HLA-F-216ENST00000259951 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.36■■□□□ 1.65
HLA-F-216ENST00000259951 ITSN2Q9NZM3 1697 aa25.31■■□□□ 1.64
HLA-F-216ENST00000259951 MIA2Q96PC5 1412 aa25.31■■□□□ 1.64
HLA-F-216ENST00000259951 PTPN23Q9H3S7 1636 aa25.28■■□□□ 1.64
HLA-F-216ENST00000259951 FAM50AQ14320 339 aaKnown RBP25.28■■□□□ 1.64
HLA-F-216ENST00000259951 TCOF1Q13428 1488 aaKnown RBP25.24■■□□□ 1.63
HLA-F-216ENST00000259951 ABCC10Q5T3U5 1492 aa25.23■■□□□ 1.63
HLA-F-216ENST00000259951 NPM1P06748 294 aaKnown RBP eCLIP25.23■■□□□ 1.63
HLA-F-216ENST00000259951 CDC42BPAQ5VT25 1732 aa25.2■■□□□ 1.63
HLA-F-216ENST00000259951 GPATCH8Q9UKJ3 1502 aaKnown RBP25.2■■□□□ 1.63
HLA-F-216ENST00000259951 WDR7Q9Y4E6 1490 aa25.16■■□□□ 1.62
HLA-F-216ENST00000259951 ITGAEP38570 1179 aa25.15■■□□□ 1.62
HLA-F-216ENST00000259951 CFDP1Q9UEE9 299 aaPredicted RBP25.15■■□□□ 1.62
HLA-F-216ENST00000259951 TRHP20396 242 aaPredicted RBP25.15■■□□□ 1.62
HLA-F-216ENST00000259951 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.14■■□□□ 1.61
HLA-F-216ENST00000259951 PREX2Q70Z35 1606 aa25.13■■□□□ 1.61
HLA-F-216ENST00000259951 MYO5CQ9NQX4 1742 aa25.12■■□□□ 1.61
HLA-F-216ENST00000259951 TTC37Q6PGP7 1564 aa25.11■■□□□ 1.61
HLA-F-216ENST00000259951 KCNH8Q96L42 1107 aa25.11■■□□□ 1.61
HLA-F-216ENST00000259951 ASXL2Q76L83 1435 aa25.1■■□□□ 1.61
HLA-F-216ENST00000259951 CDC42BPBQ9Y5S2 1711 aa25.08■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms