RNA–Protein interactions for RNA: ENST00000259241.6

HS6ST1-201, Transcript of heparan sulfate 6-O-sulfotransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HS6ST1, Length 3,932 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HS6ST1-201ENST00000259241 HNRNPUQ00839 825 aaKnown RBP eCLIP17.85■□□□□ 0.45
HS6ST1-201ENST00000259241 VPS8Q8N3P4 1428 aa17.84■□□□□ 0.45
HS6ST1-201ENST00000259241 CHGAP10645 457 aaKnown RBP17.84■□□□□ 0.45
HS6ST1-201ENST00000259241 FKBP8Q14318 412 aa17.83■□□□□ 0.44
HS6ST1-201ENST00000259241 SMARCA2P51531 1590 aa17.82■□□□□ 0.44
HS6ST1-201ENST00000259241 TSPY4P0CV99 314 aa17.81■□□□□ 0.44
HS6ST1-201ENST00000259241 TSPY10P0CW01 314 aa17.81■□□□□ 0.44
HS6ST1-201ENST00000259241 CCNB3Q8WWL7 1395 aa17.81■□□□□ 0.44
HS6ST1-201ENST00000259241 IRX6P78412 446 aaPredicted RBP17.78■□□□□ 0.44
HS6ST1-201ENST00000259241 RGL3Q3MIN7 710 aa17.78■□□□□ 0.44
HS6ST1-201ENST00000259241 CFDP1Q9UEE9 299 aaPredicted RBP17.76■□□□□ 0.43
HS6ST1-201ENST00000259241 FOXD1Q16676 465 aa17.76■□□□□ 0.43
HS6ST1-201ENST00000259241 PLPPR3Q6T4P5 718 aa17.76■□□□□ 0.43
HS6ST1-201ENST00000259241 CADPSQ9ULU8 1353 aa17.75■□□□□ 0.43
HS6ST1-201ENST00000259241 PLEKHD1A6NEE1 506 aa17.74■□□□□ 0.43
HS6ST1-201ENST00000259241 EIF4G1Q04637 1599 aaKnown RBP17.73■□□□□ 0.43
HS6ST1-201ENST00000259241 ERCC6Q03468 1493 aa17.69■□□□□ 0.42
HS6ST1-201ENST00000259241 FHOD3Q2V2M9 1422 aa17.68■□□□□ 0.42
HS6ST1-201ENST00000259241 BCL11AQ9H165 835 aa17.67■□□□□ 0.42
HS6ST1-201ENST00000259241 MRS2Q9HD23 443 aa17.67■□□□□ 0.42
HS6ST1-201ENST00000259241 EIF4G2P78344 907 aaKnown RBP eCLIP17.66■□□□□ 0.42
HS6ST1-201ENST00000259241 NPM1P06748 294 aaKnown RBP eCLIP17.64■□□□□ 0.41
HS6ST1-201ENST00000259241 CLSPNQ9HAW4 1339 aa17.63■□□□□ 0.41
HS6ST1-201ENST00000259241 RAB3GAP2Q9H2M9 1393 aa17.61■□□□□ 0.41
HS6ST1-201ENST00000259241 DNAJC5BQ9UF47 199 aa17.6■□□□□ 0.41
HS6ST1-201ENST00000259241 FHAD1B1AJZ9 1412 aa17.6■□□□□ 0.41
HS6ST1-201ENST00000259241 TMC1Q8TDI8 760 aa17.58■□□□□ 0.4
HS6ST1-201ENST00000259241 DAXXQ9UER7 740 aaPredicted RBP17.56■□□□□ 0.4
HS6ST1-201ENST00000259241 BICRAQ9NZM4 1560 aa17.55■□□□□ 0.4
HS6ST1-201ENST00000259241 RAD54L2Q9Y4B4 1467 aa17.55■□□□□ 0.4
HS6ST1-201ENST00000259241 IGF1RP08069 1367 aa17.54■□□□□ 0.4
HS6ST1-201ENST00000259241 PDS5BQ9NTI5 1447 aa17.53■□□□□ 0.4
HS6ST1-201ENST00000259241 FANCD2Q9BXW9 1451 aa17.52■□□□□ 0.4
HS6ST1-201ENST00000259241 SETD5Q9C0A6 1442 aa17.52■□□□□ 0.4
HS6ST1-201ENST00000259241 STAG3Q9UJ98 1225 aa17.49■□□□□ 0.39
HS6ST1-201ENST00000259241 CARD11Q9BXL7 1154 aa17.47■□□□□ 0.39
HS6ST1-201ENST00000259241 NCAPD3P42695 1498 aa17.47■□□□□ 0.39
HS6ST1-201ENST00000259241 ARHGAP35Q9NRY4 1499 aa17.46■□□□□ 0.39
HS6ST1-201ENST00000259241 FGD5Q6ZNL6 1462 aa17.46■□□□□ 0.39
HS6ST1-201ENST00000259241 SYNJ1O43426 1573 aa17.46■□□□□ 0.38
HS6ST1-201ENST00000259241 NPM2Q86SE8 214 aaKnown RBP17.45■□□□□ 0.38
HS6ST1-201ENST00000259241 SUPT16HQ9Y5B9 1047 aaKnown RBP17.44■□□□□ 0.38
HS6ST1-201ENST00000259241 DCAF11Q8TEB1 546 aa17.43■□□□□ 0.38
HS6ST1-201ENST00000259241 NESP48681 1621 aa17.43■□□□□ 0.38
HS6ST1-201ENST00000259241 SLC24A1O60721 1099 aa17.43■□□□□ 0.38
HS6ST1-201ENST00000259241 CANXP27824 592 aaKnown RBP17.43■□□□□ 0.38
HS6ST1-201ENST00000259241 DHX57Q6P158 1386 aaKnown RBP17.43■□□□□ 0.38
HS6ST1-201ENST00000259241 PKD2Q13563 968 aa17.42■□□□□ 0.38
HS6ST1-201ENST00000259241 HSPA5P11021 654 aaKnown RBP17.41■□□□□ 0.38
HS6ST1-201ENST00000259241 MPHOSPH9Q99550 1183 aa17.4■□□□□ 0.38
HS6ST1-201ENST00000259241 ESF1Q9H501 851 aaKnown RBP17.39■□□□□ 0.37
HS6ST1-201ENST00000259241 JPH4Q96JJ6 628 aa17.39■□□□□ 0.37
HS6ST1-201ENST00000259241 PPP1R15AO75807 674 aaPredicted RBP17.38■□□□□ 0.37
HS6ST1-201ENST00000259241 HNRNPMP52272 730 aaKnown RBP eCLIP17.38■□□□□ 0.371e-6■□□□□ 11.1
HS6ST1-201ENST00000259241 FMN1Q68DA7 1419 aa17.37■□□□□ 0.37
HS6ST1-201ENST00000259241 L3MBTL2Q969R5 705 aa17.36■□□□□ 0.37
HS6ST1-201ENST00000259241 ZNF644Q9H582 1327 aaPredicted RBP17.35■□□□□ 0.37
HS6ST1-201ENST00000259241 ARAP1Q96P48 1450 aa17.34■□□□□ 0.37
HS6ST1-201ENST00000259241 PLEKHG5O94827 1062 aa17.34■□□□□ 0.37
HS6ST1-201ENST00000259241 KIF21BO75037 1637 aa17.34■□□□□ 0.37
HS6ST1-201ENST00000259241 UNC13AQ9UPW8 1703 aa17.33■□□□□ 0.36
HS6ST1-201ENST00000259241 CCDC136Q96JN2 1154 aa17.33■□□□□ 0.36
HS6ST1-201ENST00000259241 AQRO60306 1485 aaKnown RBP eCLIP17.33■□□□□ 0.361e-8■■■■■ 58.8
HS6ST1-201ENST00000259241 PHLDB1Q86UU1 1377 aa17.32■□□□□ 0.36
HS6ST1-201ENST00000259241 CC2D1BQ5T0F9 858 aaKnown RBP17.31■□□□□ 0.36
HS6ST1-201ENST00000259241 TNNT2P45379 298 aaPredicted RBP17.29■□□□□ 0.36
HS6ST1-201ENST00000259241 WDR43Q15061 677 aaKnown RBP eCLIP17.28■□□□□ 0.36
HS6ST1-201ENST00000259241 MYT1Q01538 1121 aa17.27■□□□□ 0.36
HS6ST1-201ENST00000259241 RTL5Q5HYW3 569 aaPredicted RBP17.27■□□□□ 0.36
HS6ST1-201ENST00000259241 NUP155O75694 1391 aa17.27■□□□□ 0.35
HS6ST1-201ENST00000259241 CFTRP13569 1480 aa17.27■□□□□ 0.35
HS6ST1-201ENST00000259241 CC2D2AQ9P2K1 1620 aa17.26■□□□□ 0.35
HS6ST1-201ENST00000259241 GAPVD1Q14C86 1478 aa17.25■□□□□ 0.35
HS6ST1-201ENST00000259241 GGT6Q6P531 493 aa17.25■□□□□ 0.35
HS6ST1-201ENST00000259241 NEUROD2Q15784 382 aa17.24■□□□□ 0.35
HS6ST1-201ENST00000259241 CUX1P39880 1505 aa17.24■□□□□ 0.35
HS6ST1-201ENST00000259241 SAFB2Q14151 953 aaKnown RBP eCLIP17.23■□□□□ 0.35
HS6ST1-201ENST00000259241 MLECQ14165 292 aa17.22■□□□□ 0.35
HS6ST1-201ENST00000259241 NEFMP07197 916 aa17.21■□□□□ 0.35
HS6ST1-201ENST00000259241 CARMIL2Q6F5E8 1435 aa17.21■□□□□ 0.35
HS6ST1-201ENST00000259241 TIMELESSQ9UNS1 1208 aa17.2■□□□□ 0.34
HS6ST1-201ENST00000259241 B4GALNT3Q6L9W6 998 aa17.19■□□□□ 0.34
HS6ST1-201ENST00000259241 KNSTRNQ9Y448 316 aa17.18■□□□□ 0.34
HS6ST1-201ENST00000259241 PRXQ9BXM0 1461 aa17.18■□□□□ 0.34
HS6ST1-201ENST00000259241 PPM1GO15355 546 aaPredicted RBP17.17■□□□□ 0.34
HS6ST1-201ENST00000259241 NUTM2DQ5VT03 806 aaPredicted RBP17.15■□□□□ 0.34
HS6ST1-201ENST00000259241 ANP32AP39687 249 aaKnown RBP17.15■□□□□ 0.34
HS6ST1-201ENST00000259241 ARID4BQ4LE39 1312 aaPredicted RBP17.14■□□□□ 0.33
HS6ST1-201ENST00000259241 HMGXB3Q12766 1538 aa17.13■□□□□ 0.33
HS6ST1-201ENST00000259241 KIF3BO15066 747 aa17.12■□□□□ 0.33
HS6ST1-201ENST00000259241 NBR1Q14596 966 aa17.11■□□□□ 0.33
HS6ST1-201ENST00000259241 LRRC9Q6ZRR7 1453 aa17.1■□□□□ 0.33
HS6ST1-201ENST00000259241 EFCAB2Q5VUJ9 269 aa17.1■□□□□ 0.33
HS6ST1-201ENST00000259241 ANKRD30AQ9BXX3 1397 aa17.09■□□□□ 0.33
HS6ST1-201ENST00000259241 POLA1P09884 1462 aaPredicted RBP17.09■□□□□ 0.33
HS6ST1-201ENST00000259241 STK26Q9P289 416 aa17.09■□□□□ 0.33
HS6ST1-201ENST00000259241 CCDC18Q5T9S5 1454 aa17.08■□□□□ 0.32
HS6ST1-201ENST00000259241 TOP2BQ02880 1626 aa17.08■□□□□ 0.32
HS6ST1-201ENST00000259241 FGD6Q6ZV73 1430 aa17.08■□□□□ 0.32
HS6ST1-201ENST00000259241 ST20-MTHFSA0A0A6YYL1 179 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms